RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 SPG21Q9NZD8 308 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 MTRRQ9UBK8 725 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 FBXO10Q9UK96 956 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 CNOT6Q9ULM6 557 aaKnown RBP8.67□□□□□ -1.02
CSMD1-216ENST00000602557 MAPTP10636 758 aaKnown RBP8.67□□□□□ -1.02
CSMD1-216ENST00000602557 ZNF423Q2M1K9 1284 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 INTS5Q6P9B9 1019 aaKnown RBP8.67□□□□□ -1.02
CSMD1-216ENST00000602557 GPR65Q8IYL9 337 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 STK40Q8N2I9 435 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 TRPV3Q8NET8 790 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 ARMC5Q96C12 935 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 ALG2Q9H553 416 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 RNF19AQ9NV58 838 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 ZBTB14O43829 449 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 SLITRK3O94933 977 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 PRAMEF1O95521 474 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 PCSK9Q8NBP7 692 aaKnown RBP8.67□□□□□ -1.02
CSMD1-216ENST00000602557 SPACA7Q96KW9 195 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 LEF1Q9UJU2 399 aaPredicted RBP8.67□□□□□ -1.02
CSMD1-216ENST00000602557 TNPO3Q9Y5L0 923 aaKnown RBP8.67□□□□□ -1.02
CSMD1-216ENST00000602557 RPTORQ8N122 1335 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 C9JVG2 144 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 MARSP56192 900 aaKnown RBP8.67□□□□□ -1.02
CSMD1-216ENST00000602557 HSPA14Q0VDF9 509 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 SNAPC1Q16533 368 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 RBM20Q5T481 1227 aaKnown RBP8.67□□□□□ -1.02
CSMD1-216ENST00000602557 METTL21CQ5VZV1 264 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 PHF10Q8WUB8 498 aaKnown RBP8.67□□□□□ -1.02
CSMD1-216ENST00000602557 MRPL57Q9BQC6 102 aaKnown RBP8.67□□□□□ -1.02
CSMD1-216ENST00000602557 GTPBP2Q9BX10 602 aaKnown RBP8.67□□□□□ -1.02
CSMD1-216ENST00000602557 FAM126AQ9BYI3 521 aaPredicted RBP8.67□□□□□ -1.02
CSMD1-216ENST00000602557 NUP205Q92621 2012 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 SMIM22K7EJ46 135 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 PLD2O14939 933 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 HIST1H2ABP04908 130 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 PPP2R2BQ00005 443 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 BIKQ13323 160 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 SIM2Q14190 667 aaPredicted RBP8.67□□□□□ -1.02
CSMD1-216ENST00000602557 SLC27A1Q6PCB7 646 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 USP45Q70EL2 814 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 HIST3H2AQ7L7L0 130 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 BRSK2Q8IWQ3 736 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 FAM156AQ8NDB6 213 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 RP9Q8TA86 221 aaKnown RBP8.67□□□□□ -1.02
CSMD1-216ENST00000602557 MAFIPQ8WZ33 124 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 STARD8Q92502 1023 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 HIST1H2ACQ93077 130 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 NODALQ96S42 347 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 TMX2Q9Y320 296 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 EVPLQ92817 2033 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 MEGF6O75095 1541 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 ZW10O43264 779 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 FAM155BO75949 473 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 CYP1A2P05177 515 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 GNA13Q14344 377 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 FAM91A1Q658Y4 838 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 RETSATQ6NUM9 610 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 PRELID2Q8N945 189 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 SELENOMQ8WWX9 145 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 OMDQ99983 421 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 WDR55Q9H6Y2 383 aaPredicted RBP8.67□□□□□ -1.02
CSMD1-216ENST00000602557 SHROOM3Q8TF72 1996 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 NRXN1Q9ULB1 1477 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 LRRC10BA6NIK2 292 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 AGPSO00116 658 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 TBX10O75333 385 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 KLRC2P26717 231 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 NBPF12Q5TAG4 269 aaPredicted RBP8.67□□□□□ -1.02
CSMD1-216ENST00000602557 USP43Q70EL4 1123 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 FAM20CQ8IXL6 584 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 NELL1Q92832 810 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 PANX3Q96QZ0 392 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 POFUT2Q9Y2G5 429 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 AVILO75366 819 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 ZBED5Q49AG3 693 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 ALLCQ8N6M5 410 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 DNERQ8NFT8 737 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 ELL3Q9HB65 397 aaPredicted RBP8.67□□□□□ -1.02
CSMD1-216ENST00000602557 DIP2CQ9Y2E4 1556 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 CEMIPQ8WUJ3 1361 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 C2orf74A8MZ97 194 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 BTBD19C9JJ37 291 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 E9PAM4 449 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 FGF10O15520 208 aaPredicted RBP8.66□□□□□ -1.02
CSMD1-216ENST00000602557 UGT2B11O75310 529 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 ANGPTL1O95841 491 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 LHCGRP22888 699 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 PTPN3P26045 913 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 PRKAG1P54619 331 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 CNTN2Q02246 1040 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 ELAVL2Q12926 359 aaKnown RBP8.66□□□□□ -1.02
CSMD1-216ENST00000602557 TBRG1Q3YBR2 411 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 PITRM1Q5JRX3 1037 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 TRIM40Q6P9F5 258 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 CHPFQ8IZ52 775 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 DAW1Q8N136 415 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 TMCO6Q96DC7 493 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 PPM1MQ96MI6 270 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 NCANO14594 1321 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 ITGAVP06756 1048 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms