RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 PNLIPP16233 465 aa17.06■□□□□ 0.32
HERC3-214ENST00000601319 GLB1P16278 677 aa17.06■□□□□ 0.32
HERC3-214ENST00000601319 ADCY8P40145 1251 aa17.06■□□□□ 0.32
HERC3-214ENST00000601319 GEMP55040 296 aa17.06■□□□□ 0.32
HERC3-214ENST00000601319 HLTFQ14527 1009 aaKnown RBP eCLIP17.06■□□□□ 0.32
HERC3-214ENST00000601319 SLC1A5Q15758 541 aa17.06■□□□□ 0.32
HERC3-214ENST00000601319 PYCR3Q53H96 274 aa17.06■□□□□ 0.32
HERC3-214ENST00000601319 ZNF569Q5MCW4 686 aa17.06■□□□□ 0.32
HERC3-214ENST00000601319 RBM44Q6ZP01 1051 aaKnown RBP17.06■□□□□ 0.32
HERC3-214ENST00000601319 TRIM74Q86UV6 250 aa17.06■□□□□ 0.32
HERC3-214ENST00000601319 GALNT13Q8IUC8 556 aa17.06■□□□□ 0.32
HERC3-214ENST00000601319 TRAM1L1Q8N609 369 aa17.06■□□□□ 0.32
HERC3-214ENST00000601319 GPR26Q8NDV2 337 aa17.06■□□□□ 0.32
HERC3-214ENST00000601319 DTX3LQ8TDB6 740 aa17.06■□□□□ 0.32
HERC3-214ENST00000601319 CCDC74AQ96AQ1 378 aa17.06■□□□□ 0.32
HERC3-214ENST00000601319 SPATA13Q96N96 652 aa17.06■□□□□ 0.32
HERC3-214ENST00000601319 FSD1LQ9BXM9 530 aa17.06■□□□□ 0.32
HERC3-214ENST00000601319 APPL1Q9UKG1 709 aa17.06■□□□□ 0.32
HERC3-214ENST00000601319 ST14Q9Y5Y6 855 aa17.06■□□□□ 0.32
HERC3-214ENST00000601319 B4DGG1 531 aa17.05■□□□□ 0.32
HERC3-214ENST00000601319 GPR89AB7ZAQ6 455 aa17.05■□□□□ 0.32
HERC3-214ENST00000601319 TAF4O00268 1085 aa17.05■□□□□ 0.32
HERC3-214ENST00000601319 NTN3O00634 580 aaPredicted RBP17.05■□□□□ 0.32
HERC3-214ENST00000601319 NUDT21O43809 227 aaKnown RBP17.05■□□□□ 0.32
HERC3-214ENST00000601319 DNAJC6O75061 913 aa17.05■□□□□ 0.32
HERC3-214ENST00000601319 CSO75390 466 aaKnown RBP17.05■□□□□ 0.32
HERC3-214ENST00000601319 PTMAP06454 111 aaKnown RBP17.05■□□□□ 0.32
HERC3-214ENST00000601319 CCDC175P0C221 793 aa17.05■□□□□ 0.32
HERC3-214ENST00000601319 GPR89BP0CG08 455 aa17.05■□□□□ 0.32
HERC3-214ENST00000601319 CTBSQ01459 385 aa17.05■□□□□ 0.32
HERC3-214ENST00000601319 ISXQ2M1V0 245 aa17.05■□□□□ 0.32
HERC3-214ENST00000601319 ANKRD20A2Q5SQ80 823 aa17.05■□□□□ 0.32
HERC3-214ENST00000601319 ANKRD20A1Q5TYW2 823 aa17.05■□□□□ 0.32
HERC3-214ENST00000601319 ANKRD20A3Q5VUR7 823 aa17.05■□□□□ 0.32
HERC3-214ENST00000601319 ZDHHC20Q5W0Z9 365 aa17.05■□□□□ 0.32
HERC3-214ENST00000601319 DARS2Q6PI48 645 aaKnown RBP17.05■□□□□ 0.32
HERC3-214ENST00000601319 LRRC8AQ8IWT6 810 aa17.05■□□□□ 0.32
HERC3-214ENST00000601319 KLHDC8BQ8IXV7 354 aa17.05■□□□□ 0.32
HERC3-214ENST00000601319 TTC30BQ8N4P2 665 aa17.05■□□□□ 0.32
HERC3-214ENST00000601319 IPMKQ8NFU5 416 aa17.05■□□□□ 0.32
HERC3-214ENST00000601319 DPEP2Q9H4A9 486 aa17.05■□□□□ 0.32
HERC3-214ENST00000601319 C10orf88Q9H8K7 445 aa17.05■□□□□ 0.32
HERC3-214ENST00000601319 TAAR2Q9P1P5 351 aa17.05■□□□□ 0.32
HERC3-214ENST00000601319 TMEM98Q9Y2Y6 226 aa17.05■□□□□ 0.32
HERC3-214ENST00000601319 OAS3Q9Y6K5 1087 aaKnown RBP17.05■□□□□ 0.32
HERC3-214ENST00000601319 CELSR3Q9NYQ7 3312 aa17.04■□□□□ 0.32
HERC3-214ENST00000601319 UNC13CQ8NB66 2214 aa17.04■□□□□ 0.32
HERC3-214ENST00000601319 SLC4A1P02730 911 aa17.04■□□□□ 0.32
HERC3-214ENST00000601319 ATP1A1P05023 1023 aaKnown RBP17.04■□□□□ 0.32
HERC3-214ENST00000601319 BPIP17213 487 aa17.04■□□□□ 0.32
HERC3-214ENST00000601319 CHRNA4P43681 627 aa17.04■□□□□ 0.32
HERC3-214ENST00000601319 CYP4F3Q08477 520 aa17.04■□□□□ 0.32
HERC3-214ENST00000601319 KIF26BQ2KJY2 2108 aa17.04■□□□□ 0.32
HERC3-214ENST00000601319 ZNF438Q7Z4V0 828 aa17.04■□□□□ 0.32
HERC3-214ENST00000601319 PHYKPLQ8IUZ5 450 aa17.04■□□□□ 0.32
HERC3-214ENST00000601319 SLC35B2Q8TB61 432 aa17.04■□□□□ 0.32
HERC3-214ENST00000601319 VPS35Q96QK1 796 aa17.04■□□□□ 0.32
HERC3-214ENST00000601319 FAM118BQ9BPY3 351 aa17.04■□□□□ 0.32
HERC3-214ENST00000601319 SPATA16Q9BXB7 569 aa17.04■□□□□ 0.32
HERC3-214ENST00000601319 CARD9Q9H257 536 aa17.04■□□□□ 0.32
HERC3-214ENST00000601319 SUDS3Q9H7L9 328 aaPredicted RBP17.04■□□□□ 0.32
HERC3-214ENST00000601319 SPATS2LQ9NUQ6 558 aaKnown RBP17.04■□□□□ 0.32
HERC3-214ENST00000601319 RABGEF1Q9UJ41 708 aa17.04■□□□□ 0.32
HERC3-214ENST00000601319 GUCA1BQ9UMX6 200 aa17.04■□□□□ 0.32
HERC3-214ENST00000601319 AAR2Q9Y312 384 aaKnown RBP17.04■□□□□ 0.32
HERC3-214ENST00000601319 PCDHB1Q9Y5F3 818 aa17.04■□□□□ 0.32
HERC3-214ENST00000601319 C5orf60A6NFR6 353 aa17.03■□□□□ 0.32
HERC3-214ENST00000601319 F5H423 210 aaPredicted RBP17.03■□□□□ 0.32
HERC3-214ENST00000601319 AURKAO14965 403 aa17.03■□□□□ 0.32
HERC3-214ENST00000601319 PPFIA2O75334 1257 aa17.03■□□□□ 0.32
HERC3-214ENST00000601319 AK4P27144 223 aaPredicted RBP17.03■□□□□ 0.32
HERC3-214ENST00000601319 PSMB4P28070 264 aa17.03■□□□□ 0.32
HERC3-214ENST00000601319 ADRA1AP35348 466 aa17.03■□□□□ 0.32
HERC3-214ENST00000601319 ACTR1BP42025 376 aa17.03■□□□□ 0.32
HERC3-214ENST00000601319 PDX1P52945 283 aa17.03■□□□□ 0.32
HERC3-214ENST00000601319 ACTR1AP61163 376 aa17.03■□□□□ 0.32
HERC3-214ENST00000601319 CCZ1BP86790 482 aa17.03■□□□□ 0.32
HERC3-214ENST00000601319 CCZ1P86791 482 aaPredicted RBP17.03■□□□□ 0.32
HERC3-214ENST00000601319 SPIDRQ14159 915 aa17.03■□□□□ 0.32
HERC3-214ENST00000601319 PRPSAP1Q14558 356 aa17.03■□□□□ 0.32
HERC3-214ENST00000601319 NR1D2Q14995 579 aa17.03■□□□□ 0.32
HERC3-214ENST00000601319 ALS2CLQ60I27 953 aa17.03■□□□□ 0.32
HERC3-214ENST00000601319 SLC30A9Q6PML9 568 aa17.03■□□□□ 0.32
HERC3-214ENST00000601319 ZDHHC1Q8WTX9 485 aa17.03■□□□□ 0.32
HERC3-214ENST00000601319 GLYATL1Q969I3 302 aa17.03■□□□□ 0.32
HERC3-214ENST00000601319 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.03■□□□□ 0.32
HERC3-214ENST00000601319 GPSM3Q9Y4H4 160 aa17.03■□□□□ 0.32
HERC3-214ENST00000601319 LAMA5O15230 3695 aa17.02■□□□□ 0.32
HERC3-214ENST00000601319 D6RAR5 112 aa17.02■□□□□ 0.32
HERC3-214ENST00000601319 NRDCO43847 1150 aa17.02■□□□□ 0.32
HERC3-214ENST00000601319 NUAK1O60285 661 aa17.02■□□□□ 0.32
HERC3-214ENST00000601319 DXOO77932 396 aaKnown RBP17.02■□□□□ 0.32
HERC3-214ENST00000601319 ASMTLO95671 621 aa17.02■□□□□ 0.32
HERC3-214ENST00000601319 SEL1L2Q5TEA6 688 aa17.02■□□□□ 0.32
HERC3-214ENST00000601319 IGF2-ASQ6U949 168 aa17.02■□□□□ 0.32
HERC3-214ENST00000601319 RANBP10Q6VN20 620 aa17.02■□□□□ 0.32
HERC3-214ENST00000601319 MARK2Q7KZI7 788 aaKnown RBP17.02■□□□□ 0.32
HERC3-214ENST00000601319 GLT6D1Q7Z4J2 308 aa17.02■□□□□ 0.32
HERC3-214ENST00000601319 SPRED1Q7Z699 444 aa17.02■□□□□ 0.32
HERC3-214ENST00000601319 CCNJLQ8IV13 435 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms