RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 SCAMP4Q969E2 229 aa12.04□□□□□ -0.48
ZNF548-209ENST00000598895 OXNAD1Q96HP4 312 aaPredicted RBP12.04□□□□□ -0.48
ZNF548-209ENST00000598895 TRIB3Q96RU7 358 aa12.04□□□□□ -0.48
ZNF548-209ENST00000598895 AGAP2Q99490 1192 aa12.04□□□□□ -0.48
ZNF548-209ENST00000598895 CDC6Q99741 560 aa12.04□□□□□ -0.48
ZNF548-209ENST00000598895 TACO1Q9BSH4 297 aaKnown RBP12.04□□□□□ -0.48
ZNF548-209ENST00000598895 ABCG8Q9H221 673 aa12.04□□□□□ -0.48
ZNF548-209ENST00000598895 MRPL40Q9NQ50 206 aaKnown RBP12.04□□□□□ -0.48
ZNF548-209ENST00000598895 KLQ9UEF7 1012 aa12.04□□□□□ -0.48
ZNF548-209ENST00000598895 SHOC2Q9UQ13 582 aa12.04□□□□□ -0.48
ZNF548-209ENST00000598895 COL5A1P20908 1838 aaPredicted RBP12.03□□□□□ -0.48
ZNF548-209ENST00000598895 ANKRD65E5RJM6 399 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 PSMD11O00231 422 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 CACNB4O00305 520 aaPredicted RBP12.03□□□□□ -0.48
ZNF548-209ENST00000598895 AQP9O43315 295 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 TNFSF14O43557 240 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 SIGLEC6O43699 453 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 CELA2BP08218 269 aaPredicted RBP12.03□□□□□ -0.48
ZNF548-209ENST00000598895 HNRNPH1P31943 449 aaKnown RBP12.03□□□□□ -0.48
ZNF548-209ENST00000598895 GPR1P46091 355 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 FNTAP49354 379 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 STC1P52823 247 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 WNT3AP56704 352 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 RPL26P61254 145 aaKnown RBP12.03□□□□□ -0.48
ZNF548-209ENST00000598895 ACTN3Q08043 901 aaPredicted RBP12.03□□□□□ -0.48
ZNF548-209ENST00000598895 SLMAPQ14BN4 828 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 DEFB133Q30KQ1 61 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 PRRT3Q5FWE3 981 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 ANKRD20A2Q5SQ80 823 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 ANKRD20A1Q5TYW2 823 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 GKAP1Q5VSY0 366 aaPredicted RBP12.03□□□□□ -0.48
ZNF548-209ENST00000598895 ANKRD20A3Q5VUR7 823 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 DUPD1Q68J44 220 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 DOK6Q6PKX4 331 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 KDELC1Q6UW63 502 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 TECPR1Q7Z6L1 1165 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 TRIM74Q86UV6 250 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 HEATR4Q86WZ0 1026 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 CACNA2D3Q8IZS8 1091 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 CBARPQ8N350 705 aaPredicted RBP12.03□□□□□ -0.48
ZNF548-209ENST00000598895 CHCHD4Q8N4Q1 142 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 CCDC110Q8TBZ0 833 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 ATG4AQ8WYN0 398 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 TADA1Q96BN2 335 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 TLCD1Q96CP7 247 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 AP2M1Q96CW1 435 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 PGM2Q96G03 612 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 PDXPQ96GD0 296 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 WDR92Q96MX6 357 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 FCRL5Q96RD9 977 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 VAT1Q99536 393 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 LRRC61Q9BV99 259 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 RIOK2Q9BVS4 552 aaKnown RBP12.03□□□□□ -0.48
ZNF548-209ENST00000598895 TXLNGYQ9BZA5 131 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 SLC13A1Q9BZW2 595 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 WDR26Q9H7D7 661 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 TOR4AQ9NXH8 423 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 NOVA2Q9UNW9 492 aaKnown RBP12.03□□□□□ -0.48
ZNF548-209ENST00000598895 RPL26L1Q9UNX3 145 aaKnown RBP12.03□□□□□ -0.48
ZNF548-209ENST00000598895 APOBEC2Q9Y235 224 aaKnown RBP12.03□□□□□ -0.48
ZNF548-209ENST00000598895 SPO11Q9Y5K1 396 aa12.03□□□□□ -0.48
ZNF548-209ENST00000598895 TOR1BO14657 336 aa12.02□□□□□ -0.49
ZNF548-209ENST00000598895 INPP4BO15327 924 aa12.02□□□□□ -0.49
ZNF548-209ENST00000598895 GCATO75600 419 aa12.02□□□□□ -0.49
ZNF548-209ENST00000598895 STK10O94804 968 aaKnown RBP12.02□□□□□ -0.49
ZNF548-209ENST00000598895 RASGRP1O95267 797 aa12.02□□□□□ -0.49
ZNF548-209ENST00000598895 NDST3O95803 873 aa12.02□□□□□ -0.49
ZNF548-209ENST00000598895 GIMD1P0DJR0 217 aa12.02□□□□□ -0.49
ZNF548-209ENST00000598895 CTSEP14091 401 aa12.02□□□□□ -0.49
ZNF548-209ENST00000598895 TSHRP16473 764 aa12.02□□□□□ -0.49
ZNF548-209ENST00000598895 ZNF30P17039 623 aa12.02□□□□□ -0.49
ZNF548-209ENST00000598895 PSMB4P28070 264 aa12.02□□□□□ -0.49
ZNF548-209ENST00000598895 PMLP29590 882 aa12.02□□□□□ -0.49
ZNF548-209ENST00000598895 PMS2P54278 862 aa12.02□□□□□ -0.49
ZNF548-209ENST00000598895 CLDN6P56747 220 aa12.02□□□□□ -0.49
ZNF548-209ENST00000598895 KIAA1024LP59773 190 aa12.02□□□□□ -0.49
ZNF548-209ENST00000598895 SRP54P61011 504 aaKnown RBP12.02□□□□□ -0.49
ZNF548-209ENST00000598895 DAB2P98082 770 aa12.02□□□□□ -0.49
ZNF548-209ENST00000598895 FOXK2Q01167 660 aa12.02□□□□□ -0.49
ZNF548-209ENST00000598895 KLF1Q13351 362 aaPredicted RBP12.02□□□□□ -0.49
ZNF548-209ENST00000598895 OLIG2Q13516 323 aa12.02□□□□□ -0.49
ZNF548-209ENST00000598895 TRADDQ15628 312 aa12.02□□□□□ -0.49
ZNF548-209ENST00000598895 CDKN3Q16667 212 aa12.02□□□□□ -0.49
ZNF548-209ENST00000598895 C6orf89Q6UWU4 347 aa12.02□□□□□ -0.49
ZNF548-209ENST00000598895 CCDC91Q7Z6B0 441 aa12.02□□□□□ -0.49
ZNF548-209ENST00000598895 GLRX5Q86SX6 157 aa12.02□□□□□ -0.49
ZNF548-209ENST00000598895 TTC13Q8NBP0 860 aa12.02□□□□□ -0.49
ZNF548-209ENST00000598895 OR56A4Q8NGH8 313 aa12.02□□□□□ -0.49
ZNF548-209ENST00000598895 PTCD2Q8WV60 388 aaKnown RBP12.02□□□□□ -0.49
ZNF548-209ENST00000598895 BTN2A2Q8WVV5 523 aa12.02□□□□□ -0.49
ZNF548-209ENST00000598895 MAIP1Q8WWC4 291 aa12.02□□□□□ -0.49
ZNF548-209ENST00000598895 OR1E3Q8WZA6 343 aa12.02□□□□□ -0.49
ZNF548-209ENST00000598895 MRGPRX2Q96LB1 330 aa12.02□□□□□ -0.49
ZNF548-209ENST00000598895 APOL2Q9BQE5 337 aa12.02□□□□□ -0.49
ZNF548-209ENST00000598895 FERMT1Q9BQL6 677 aa12.02□□□□□ -0.49
ZNF548-209ENST00000598895 GORASP1Q9BQQ3 440 aa12.02□□□□□ -0.49
ZNF548-209ENST00000598895 FICDQ9BVA6 458 aa12.02□□□□□ -0.49
ZNF548-209ENST00000598895 TMEM109Q9BVC6 243 aa12.02□□□□□ -0.49
ZNF548-209ENST00000598895 GPR63Q9BZJ6 419 aa12.02□□□□□ -0.49
ZNF548-209ENST00000598895 CLPBQ9H078 707 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms