RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 TCRBV7S2A1N4TA0A589 114 aa18.34■□□□□ 0.53
SHKBP1-202ENST00000593764 B4DGG1 531 aa18.34■□□□□ 0.53
SHKBP1-202ENST00000593764 KCNN4O15554 427 aa18.34■□□□□ 0.53
SHKBP1-202ENST00000593764 CSO75390 466 aaKnown RBP18.34■□□□□ 0.53
SHKBP1-202ENST00000593764 SLC4A1P02730 911 aa18.34■□□□□ 0.53
SHKBP1-202ENST00000593764 GLB1P16278 677 aa18.34■□□□□ 0.53
SHKBP1-202ENST00000593764 ISXQ2M1V0 245 aa18.34■□□□□ 0.53
SHKBP1-202ENST00000593764 C14orf28Q4W4Y0 310 aa18.34■□□□□ 0.53
SHKBP1-202ENST00000593764 CERCAMQ5T4B2 595 aa18.34■□□□□ 0.53
SHKBP1-202ENST00000593764 SLC30A9Q6PML9 568 aa18.34■□□□□ 0.53
SHKBP1-202ENST00000593764 LRRC8AQ8IWT6 810 aa18.34■□□□□ 0.53
SHKBP1-202ENST00000593764 TTC30BQ8N4P2 665 aa18.34■□□□□ 0.53
SHKBP1-202ENST00000593764 SLC25A41Q8N5S1 370 aa18.34■□□□□ 0.53
SHKBP1-202ENST00000593764 IPMKQ8NFU5 416 aa18.34■□□□□ 0.53
SHKBP1-202ENST00000593764 OR6C4Q8NGE1 309 aa18.34■□□□□ 0.53
SHKBP1-202ENST00000593764 NXPE2Q96DL1 559 aa18.34■□□□□ 0.53
SHKBP1-202ENST00000593764 OR2M4Q96R27 311 aa18.34■□□□□ 0.53
SHKBP1-202ENST00000593764 SPATA16Q9BXB7 569 aa18.34■□□□□ 0.53
SHKBP1-202ENST00000593764 TSGA10Q9BZW7 698 aa18.34■□□□□ 0.53
SHKBP1-202ENST00000593764 VPS18Q9P253 973 aa18.34■□□□□ 0.53
SHKBP1-202ENST00000593764 GPSM3Q9Y4H4 160 aa18.34■□□□□ 0.53
SHKBP1-202ENST00000593764 UNC13CQ8NB66 2214 aa18.34■□□□□ 0.53
SHKBP1-202ENST00000593764 KRT86O43790 486 aa18.33■□□□□ 0.52
SHKBP1-202ENST00000593764 TCEA3O75764 348 aa18.33■□□□□ 0.52
SHKBP1-202ENST00000593764 ASMTLO95671 621 aa18.33■□□□□ 0.52
SHKBP1-202ENST00000593764 AGTP01019 485 aa18.33■□□□□ 0.52
SHKBP1-202ENST00000593764 ADRA1AP35348 466 aa18.33■□□□□ 0.52
SHKBP1-202ENST00000593764 HMGCLP35914 325 aa18.33■□□□□ 0.52
SHKBP1-202ENST00000593764 CCL7P80098 99 aa18.33■□□□□ 0.52
SHKBP1-202ENST00000593764 ALS2CLQ60I27 953 aa18.33■□□□□ 0.52
SHKBP1-202ENST00000593764 TRAM1L1Q8N609 369 aa18.33■□□□□ 0.52
SHKBP1-202ENST00000593764 CCDC112Q8NEF3 446 aa18.33■□□□□ 0.52
SHKBP1-202ENST00000593764 CCDC110Q8TBZ0 833 aa18.33■□□□□ 0.52
SHKBP1-202ENST00000593764 ZDHHC1Q8WTX9 485 aa18.33■□□□□ 0.52
SHKBP1-202ENST00000593764 ZSCAN5AQ9BUG6 496 aa18.33■□□□□ 0.52
SHKBP1-202ENST00000593764 TRABDQ9H4I3 376 aa18.33■□□□□ 0.52
SHKBP1-202ENST00000593764 BPIFA1Q9NP55 256 aa18.33■□□□□ 0.52
SHKBP1-202ENST00000593764 RAD18Q9NS91 495 aa18.33■□□□□ 0.52
SHKBP1-202ENST00000593764 APPL1Q9UKG1 709 aa18.33■□□□□ 0.52
SHKBP1-202ENST00000593764 R3HDM2Q9Y2K5 976 aaKnown RBP18.33■□□□□ 0.52
SHKBP1-202ENST00000593764 RAXQ9Y2V3 346 aa18.33■□□□□ 0.52
SHKBP1-202ENST00000593764 PRKAB1Q9Y478 270 aa18.33■□□□□ 0.52
SHKBP1-202ENST00000593764 RNF215Q9Y6U7 377 aa18.33■□□□□ 0.52
SHKBP1-202ENST00000593764 A0A1W2PNU3 283 aaPredicted RBP18.32■□□□□ 0.52
SHKBP1-202ENST00000593764 A0A1W2PQM1 296 aa18.32■□□□□ 0.52
SHKBP1-202ENST00000593764 USP12O75317 370 aa18.32■□□□□ 0.52
SHKBP1-202ENST00000593764 ANXA9O76027 345 aa18.32■□□□□ 0.52
SHKBP1-202ENST00000593764 PNLIPP16233 465 aa18.32■□□□□ 0.52
SHKBP1-202ENST00000593764 HLA-DPA1P20036 260 aa18.32■□□□□ 0.52
SHKBP1-202ENST00000593764 PSMB4P28070 264 aa18.32■□□□□ 0.52
SHKBP1-202ENST00000593764 PDX1P52945 283 aa18.32■□□□□ 0.52
SHKBP1-202ENST00000593764 GEMP55040 296 aa18.32■□□□□ 0.52
SHKBP1-202ENST00000593764 ZNF648Q5T619 568 aaPredicted RBP18.32■□□□□ 0.52
SHKBP1-202ENST00000593764 ITPRIPL1Q6GPH6 555 aa18.32■□□□□ 0.52
SHKBP1-202ENST00000593764 RANBP10Q6VN20 620 aa18.32■□□□□ 0.52
SHKBP1-202ENST00000593764 RBM44Q6ZP01 1051 aaKnown RBP18.32■□□□□ 0.52
SHKBP1-202ENST00000593764 ZNF662Q6ZS27 426 aa18.32■□□□□ 0.52
SHKBP1-202ENST00000593764 GALNT13Q8IUC8 556 aa18.32■□□□□ 0.52
SHKBP1-202ENST00000593764 NAGSQ8N159 534 aa18.32■□□□□ 0.52
SHKBP1-202ENST00000593764 TTC13Q8NBP0 860 aa18.32■□□□□ 0.52
SHKBP1-202ENST00000593764 WDR48Q8TAF3 677 aa18.32■□□□□ 0.52
SHKBP1-202ENST00000593764 PATE1Q8WXA2 126 aa18.32■□□□□ 0.52
SHKBP1-202ENST00000593764 SPATA13Q96N96 652 aa18.32■□□□□ 0.52
SHKBP1-202ENST00000593764 FERMT1Q9BQL6 677 aa18.32■□□□□ 0.52
SHKBP1-202ENST00000593764 ARFGAP3Q9NP61 516 aa18.32■□□□□ 0.52
SHKBP1-202ENST00000593764 IL17CQ9P0M4 197 aa18.32■□□□□ 0.52
SHKBP1-202ENST00000593764 LRIT1Q9P2V4 623 aa18.32■□□□□ 0.52
SHKBP1-202ENST00000593764 ATXN10Q9UBB4 475 aa18.32■□□□□ 0.52
SHKBP1-202ENST00000593764 ZNHIT2Q9UHR6 403 aa18.32■□□□□ 0.52
SHKBP1-202ENST00000593764 TMPRSS11EQ9UL52 423 aa18.32■□□□□ 0.52
SHKBP1-202ENST00000593764 ENTPD2Q9Y5L3 495 aa18.32■□□□□ 0.52
SHKBP1-202ENST00000593764 AK5Q9Y6K8 562 aa18.32■□□□□ 0.52
SHKBP1-202ENST00000593764 BPTFQ12830 3046 aa18.32■□□□□ 0.52
SHKBP1-202ENST00000593764 GOLGA6L9A6NEM1 432 aa18.31■□□□□ 0.52
SHKBP1-202ENST00000593764 C5orf60A6NFR6 353 aa18.31■□□□□ 0.52
SHKBP1-202ENST00000593764 NUDT21O43809 227 aaKnown RBP18.31■□□□□ 0.52
SHKBP1-202ENST00000593764 SLC25A14O95258 325 aaPredicted RBP18.31■□□□□ 0.52
SHKBP1-202ENST00000593764 ECEL1O95672 775 aa18.31■□□□□ 0.52
SHKBP1-202ENST00000593764 ACTR1BP42025 376 aa18.31■□□□□ 0.52
SHKBP1-202ENST00000593764 MAZP56270 477 aaKnown RBP18.31■□□□□ 0.52
SHKBP1-202ENST00000593764 ACTR1AP61163 376 aa18.31■□□□□ 0.52
SHKBP1-202ENST00000593764 CCZ1BP86790 482 aa18.31■□□□□ 0.52
SHKBP1-202ENST00000593764 CCZ1P86791 482 aaPredicted RBP18.31■□□□□ 0.52
SHKBP1-202ENST00000593764 OLIG2Q13516 323 aa18.31■□□□□ 0.52
SHKBP1-202ENST00000593764 ZNF569Q5MCW4 686 aa18.31■□□□□ 0.52
SHKBP1-202ENST00000593764 PDPK2PQ6A1A2 396 aa18.31■□□□□ 0.52
SHKBP1-202ENST00000593764 KLHDC8BQ8IXV7 354 aa18.31■□□□□ 0.52
SHKBP1-202ENST00000593764 SLC35B2Q8TB61 432 aa18.31■□□□□ 0.52
SHKBP1-202ENST00000593764 GLYATL1Q969I3 302 aa18.31■□□□□ 0.52
SHKBP1-202ENST00000593764 PLEKHG4BQ96PX9 1271 aa18.31■□□□□ 0.52
SHKBP1-202ENST00000593764 FICDQ9BVA6 458 aa18.31■□□□□ 0.52
SHKBP1-202ENST00000593764 FSD1LQ9BXM9 530 aa18.31■□□□□ 0.52
SHKBP1-202ENST00000593764 CARD9Q9H257 536 aa18.31■□□□□ 0.52
SHKBP1-202ENST00000593764 TRIM39Q9HCM9 518 aa18.31■□□□□ 0.52
SHKBP1-202ENST00000593764 IL26Q9NPH9 171 aa18.31■□□□□ 0.52
SHKBP1-202ENST00000593764 HACD3Q9P035 362 aa18.31■□□□□ 0.52
SHKBP1-202ENST00000593764 KIF26BQ2KJY2 2108 aa18.31■□□□□ 0.52
SHKBP1-202ENST00000593764 SCN8AQ9UQD0 1980 aa18.3■□□□□ 0.52
SHKBP1-202ENST00000593764 NUAK1O60285 661 aa18.3■□□□□ 0.52
SHKBP1-202ENST00000593764 BRINP1O60477 761 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms