RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 ATP1A1P05023 1023 aaKnown RBP27.02■■□□□ 1.92
SMAD4-213ENST00000591914 GLB1P16278 677 aa27.02■■□□□ 1.92
SMAD4-213ENST00000591914 HLA-DPA1P20036 260 aa27.02■■□□□ 1.92
SMAD4-213ENST00000591914 AK4P27144 223 aaPredicted RBP27.02■■□□□ 1.92
SMAD4-213ENST00000591914 TNNT3P45378 269 aaPredicted RBP27.02■■□□□ 1.92
SMAD4-213ENST00000591914 ANKRD20A2Q5SQ80 823 aa27.02■■□□□ 1.92
SMAD4-213ENST00000591914 ANKRD20A1Q5TYW2 823 aa27.02■■□□□ 1.92
SMAD4-213ENST00000591914 ANKRD20A3Q5VUR7 823 aa27.02■■□□□ 1.92
SMAD4-213ENST00000591914 MARK2Q7KZI7 788 aaKnown RBP27.02■■□□□ 1.92
SMAD4-213ENST00000591914 C17orf82Q86X59 251 aaPredicted RBP27.02■■□□□ 1.92
SMAD4-213ENST00000591914 TTC13Q8NBP0 860 aa27.02■■□□□ 1.92
SMAD4-213ENST00000591914 SPATA16Q9BXB7 569 aa27.02■■□□□ 1.92
SMAD4-213ENST00000591914 APPL1Q9UKG1 709 aa27.02■■□□□ 1.92
SMAD4-213ENST00000591914 GUCA1BQ9UMX6 200 aa27.02■■□□□ 1.92
SMAD4-213ENST00000591914 GPSM3Q9Y4H4 160 aa27.02■■□□□ 1.92
SMAD4-213ENST00000591914 GOLGA6L9A6NEM1 432 aa27.01■■□□□ 1.91
SMAD4-213ENST00000591914 NTN3O00634 580 aaPredicted RBP27.01■■□□□ 1.91
SMAD4-213ENST00000591914 DNAJC6O75061 913 aa27.01■■□□□ 1.91
SMAD4-213ENST00000591914 ZNF189O75820 626 aaPredicted RBP27.01■■□□□ 1.91
SMAD4-213ENST00000591914 KRT37O76014 449 aa27.01■■□□□ 1.91
SMAD4-213ENST00000591914 ANXA9O76027 345 aa27.01■■□□□ 1.91
SMAD4-213ENST00000591914 STK10O94804 968 aaKnown RBP27.01■■□□□ 1.91
SMAD4-213ENST00000591914 ASMTLO95671 621 aa27.01■■□□□ 1.91
SMAD4-213ENST00000591914 FGF1P05230 155 aa27.01■■□□□ 1.91
SMAD4-213ENST00000591914 BPIP17213 487 aa27.01■■□□□ 1.91
SMAD4-213ENST00000591914 HMGCLP35914 325 aa27.01■■□□□ 1.91
SMAD4-213ENST00000591914 ISXQ2M1V0 245 aa27.01■■□□□ 1.91
SMAD4-213ENST00000591914 ALS2CLQ60I27 953 aa27.01■■□□□ 1.91
SMAD4-213ENST00000591914 PDPK2PQ6A1A2 396 aa27.01■■□□□ 1.91
SMAD4-213ENST00000591914 SLC30A9Q6PML9 568 aa27.01■■□□□ 1.91
SMAD4-213ENST00000591914 RBM44Q6ZP01 1051 aaKnown RBP27.01■■□□□ 1.91
SMAD4-213ENST00000591914 GALNT13Q8IUC8 556 aa27.01■■□□□ 1.91
SMAD4-213ENST00000591914 TRAM1L1Q8N609 369 aa27.01■■□□□ 1.91
SMAD4-213ENST00000591914 UBE2Q2Q8WVN8 375 aa27.01■■□□□ 1.91
SMAD4-213ENST00000591914 FSD1LQ9BXM9 530 aa27.01■■□□□ 1.91
SMAD4-213ENST00000591914 HACD3Q9P035 362 aa27.01■■□□□ 1.91
SMAD4-213ENST00000591914 PLEKHM1Q9Y4G2 1056 aa27.01■■□□□ 1.91
SMAD4-213ENST00000591914 ACACAQ13085 2346 aa27.01■■□□□ 1.91
SMAD4-213ENST00000591914 LAMA5O15230 3695 aa27■■□□□ 1.91
SMAD4-213ENST00000591914 PNLIPP16233 465 aa27■■□□□ 1.91
SMAD4-213ENST00000591914 GEMP55040 296 aa27■■□□□ 1.91
SMAD4-213ENST00000591914 PEX6Q13608 980 aa27■■□□□ 1.91
SMAD4-213ENST00000591914 LRP8Q14114 963 aa27■■□□□ 1.91
SMAD4-213ENST00000591914 ZNF569Q5MCW4 686 aa27■■□□□ 1.91
SMAD4-213ENST00000591914 LRRC8AQ8IWT6 810 aa27■■□□□ 1.91
SMAD4-213ENST00000591914 TTC30BQ8N4P2 665 aa27■■□□□ 1.91
SMAD4-213ENST00000591914 SLC25A41Q8N5S1 370 aa27■■□□□ 1.91
SMAD4-213ENST00000591914 ZDHHC1Q8WTX9 485 aa27■■□□□ 1.91
SMAD4-213ENST00000591914 GRAMD1AQ96CP6 724 aa27■■□□□ 1.91
SMAD4-213ENST00000591914 SPATA13Q96N96 652 aa27■■□□□ 1.91
SMAD4-213ENST00000591914 PLEKHG4BQ96PX9 1271 aa27■■□□□ 1.91
SMAD4-213ENST00000591914 RMI1Q9H9A7 625 aa27■■□□□ 1.91
SMAD4-213ENST00000591914 PCYT1BQ9Y5K3 369 aaPredicted RBP27■■□□□ 1.91
SMAD4-213ENST00000591914 AK5Q9Y6K8 562 aa27■■□□□ 1.91
SMAD4-213ENST00000591914 PKD1L2Q7Z442 2459 aa27■■□□□ 1.91
SMAD4-213ENST00000591914 NUDT21O43809 227 aaKnown RBP26.99■■□□□ 1.91
SMAD4-213ENST00000591914 PTMAP06454 111 aaKnown RBP26.99■■□□□ 1.91
SMAD4-213ENST00000591914 RNF215Q9Y6U7 377 aa26.99■■□□□ 1.91
SMAD4-213ENST00000591914 CFAP47Q6ZTR5 3102 aa26.98■■□□□ 1.91
SMAD4-213ENST00000591914 USP12O75317 370 aa26.98■■□□□ 1.91
SMAD4-213ENST00000591914 AGTP01019 485 aa26.98■■□□□ 1.91
SMAD4-213ENST00000591914 PSMB4P28070 264 aa26.98■■□□□ 1.91
SMAD4-213ENST00000591914 ACTR1BP42025 376 aa26.98■■□□□ 1.91
SMAD4-213ENST00000591914 PDX1P52945 283 aa26.98■■□□□ 1.91
SMAD4-213ENST00000591914 ACTR1AP61163 376 aa26.98■■□□□ 1.91
SMAD4-213ENST00000591914 SPIDRQ14159 915 aa26.98■■□□□ 1.91
SMAD4-213ENST00000591914 ZNF662Q6ZS27 426 aa26.98■■□□□ 1.91
SMAD4-213ENST00000591914 CCDC110Q8TBZ0 833 aa26.98■■□□□ 1.91
SMAD4-213ENST00000591914 GLYATL1Q969I3 302 aa26.98■■□□□ 1.91
SMAD4-213ENST00000591914 LRIT1Q9P2V4 623 aa26.98■■□□□ 1.91
SMAD4-213ENST00000591914 ZNHIT2Q9UHR6 403 aa26.98■■□□□ 1.91
SMAD4-213ENST00000591914 R3HDM2Q9Y2K5 976 aaKnown RBP26.98■■□□□ 1.91
SMAD4-213ENST00000591914 RAXQ9Y2V3 346 aa26.98■■□□□ 1.91
SMAD4-213ENST00000591914 AAR2Q9Y312 384 aaKnown RBP26.98■■□□□ 1.91
SMAD4-213ENST00000591914 ENTPD2Q9Y5L3 495 aa26.98■■□□□ 1.91
SMAD4-213ENST00000591914 ZFHX4Q86UP3 3567 aa26.98■■□□□ 1.91
SMAD4-213ENST00000591914 A0A1W2PQM1 296 aa26.97■■□□□ 1.91
SMAD4-213ENST00000591914 TCRBV7S2A1N4TA0A589 114 aa26.97■■□□□ 1.91
SMAD4-213ENST00000591914 C5orf60A6NFR6 353 aa26.97■■□□□ 1.91
SMAD4-213ENST00000591914 ADRA1AP35348 466 aa26.97■■□□□ 1.91
SMAD4-213ENST00000591914 MAZP56270 477 aaKnown RBP26.97■■□□□ 1.91
SMAD4-213ENST00000591914 CCL7P80098 99 aa26.97■■□□□ 1.91
SMAD4-213ENST00000591914 RANBP10Q6VN20 620 aa26.97■■□□□ 1.91
SMAD4-213ENST00000591914 CCNJLQ8IV13 435 aa26.97■■□□□ 1.91
SMAD4-213ENST00000591914 NAGSQ8N159 534 aa26.97■■□□□ 1.91
SMAD4-213ENST00000591914 SLC35B2Q8TB61 432 aa26.97■■□□□ 1.91
SMAD4-213ENST00000591914 BLOC1S5Q8TDH9 187 aa26.97■■□□□ 1.91
SMAD4-213ENST00000591914 PPP1R2P1Q96PQ5 205 aa26.97■■□□□ 1.91
SMAD4-213ENST00000591914 FICDQ9BVA6 458 aa26.97■■□□□ 1.91
SMAD4-213ENST00000591914 CARD9Q9H257 536 aa26.97■■□□□ 1.91
SMAD4-213ENST00000591914 TRIM39Q9HCM9 518 aa26.97■■□□□ 1.91
SMAD4-213ENST00000591914 BPIFA1Q9NP55 256 aa26.97■■□□□ 1.91
SMAD4-213ENST00000591914 IL17CQ9P0M4 197 aa26.97■■□□□ 1.91
SMAD4-213ENST00000591914 ATXN10Q9UBB4 475 aa26.97■■□□□ 1.91
SMAD4-213ENST00000591914 PRKAB1Q9Y478 270 aa26.97■■□□□ 1.91
SMAD4-213ENST00000591914 ZFC3H1O60293 1989 aaKnown RBP26.97■■□□□ 1.91
SMAD4-213ENST00000591914 DSPP15924 2871 aaKnown RBP26.96■■□□□ 1.91
SMAD4-213ENST00000591914 NUAK1O60285 661 aa26.96■■□□□ 1.91
SMAD4-213ENST00000591914 BRINP1O60477 761 aa26.96■■□□□ 1.91
SMAD4-213ENST00000591914 SLC25A14O95258 325 aaPredicted RBP26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms