RNA–Protein interactions for RNA: ENST00000589165.5

ERCC1-208, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, human

APPRIS P1 TSL 5 BASIC

Gene ERCC1, Length 1,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC1-208	ENST00000589165	CCZ1B	P86790	482 aa		13.76	□□□□□ -0.21
ERCC1-208	ENST00000589165	CCZ1	P86791	482 aa	Predicted RBP	13.76	□□□□□ -0.21
ERCC1-208	ENST00000589165	LRP8	Q14114	963 aa		13.76	□□□□□ -0.21
ERCC1-208	ENST00000589165	PYCR3	Q53H96	274 aa		13.76	□□□□□ -0.21
ERCC1-208	ENST00000589165	CERCAM	Q5T4B2	595 aa		13.76	□□□□□ -0.21
ERCC1-208	ENST00000589165	DOK6	Q6PKX4	331 aa		13.76	□□□□□ -0.21
ERCC1-208	ENST00000589165	TRIM74	Q86UV6	250 aa		13.76	□□□□□ -0.21
ERCC1-208	ENST00000589165	C17orf82	Q86X59	251 aa	Predicted RBP	13.76	□□□□□ -0.21
ERCC1-208	ENST00000589165	PROSER1	Q86XN7	944 aa		13.76	□□□□□ -0.21
ERCC1-208	ENST00000589165	TRAM1L1	Q8N609	369 aa		13.76	□□□□□ -0.21
ERCC1-208	ENST00000589165	IPMK	Q8NFU5	416 aa		13.76	□□□□□ -0.21
ERCC1-208	ENST00000589165	DTX3L	Q8TDB6	740 aa		13.76	□□□□□ -0.21
ERCC1-208	ENST00000589165	GRAMD1A	Q96CP6	724 aa		13.76	□□□□□ -0.21
ERCC1-208	ENST00000589165	NXPE2	Q96DL1	559 aa		13.76	□□□□□ -0.21
ERCC1-208	ENST00000589165	PLEKHG4B	Q96PX9	1271 aa		13.76	□□□□□ -0.21
ERCC1-208	ENST00000589165	DEPDC7	Q96QD5	511 aa		13.76	□□□□□ -0.21
ERCC1-208	ENST00000589165	OR2M4	Q96R27	311 aa		13.76	□□□□□ -0.21
ERCC1-208	ENST00000589165	CCDC3	Q9BQI4	270 aa		13.76	□□□□□ -0.21
ERCC1-208	ENST00000589165	FSD1L	Q9BXM9	530 aa		13.76	□□□□□ -0.21
ERCC1-208	ENST00000589165	DPEP2	Q9H4A9	486 aa		13.76	□□□□□ -0.21
ERCC1-208	ENST00000589165	RMI1	Q9H9A7	625 aa		13.76	□□□□□ -0.21
ERCC1-208	ENST00000589165	ST14	Q9Y5Y6	855 aa		13.76	□□□□□ -0.21
ERCC1-208	ENST00000589165	LAMA5	O15230	3695 aa		13.76	□□□□□ -0.21
ERCC1-208	ENST00000589165	DSP	P15924	2871 aa	Known RBP	13.75	□□□□□ -0.21
ERCC1-208	ENST00000589165	C5orf60	A6NFR6	353 aa		13.75	□□□□□ -0.21
ERCC1-208	ENST00000589165		F5H423	210 aa	Predicted RBP	13.75	□□□□□ -0.21
ERCC1-208	ENST00000589165	NUDT21	O43809	227 aa	Known RBP	13.75	□□□□□ -0.21
ERCC1-208	ENST00000589165	NRDC	O43847	1150 aa		13.75	□□□□□ -0.21
ERCC1-208	ENST00000589165	DNAJC6	O75061	913 aa		13.75	□□□□□ -0.21
ERCC1-208	ENST00000589165	PNLIP	P16233	465 aa		13.75	□□□□□ -0.21
ERCC1-208	ENST00000589165	GLB1	P16278	677 aa		13.75	□□□□□ -0.21
ERCC1-208	ENST00000589165	BPI	P17213	487 aa		13.75	□□□□□ -0.21
ERCC1-208	ENST00000589165	ADRA1A	P35348	466 aa		13.75	□□□□□ -0.21
ERCC1-208	ENST00000589165	CHRNA4	P43681	627 aa		13.75	□□□□□ -0.21
ERCC1-208	ENST00000589165	CTBS	Q01459	385 aa		13.75	□□□□□ -0.21
ERCC1-208	ENST00000589165	HLTF	Q14527	1009 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
ERCC1-208	ENST00000589165	PRPSAP1	Q14558	356 aa		13.75	□□□□□ -0.21
ERCC1-208	ENST00000589165	RTP5	Q14D33	572 aa		13.75	□□□□□ -0.21
ERCC1-208	ENST00000589165	C14orf28	Q4W4Y0	310 aa		13.75	□□□□□ -0.21
ERCC1-208	ENST00000589165	MEI1	Q5TIA1	1274 aa		13.75	□□□□□ -0.21
ERCC1-208	ENST00000589165	ZDHHC20	Q5W0Z9	365 aa		13.75	□□□□□ -0.21
ERCC1-208	ENST00000589165	RANBP10	Q6VN20	620 aa		13.75	□□□□□ -0.21
ERCC1-208	ENST00000589165	KLHDC8B	Q8IXV7	354 aa		13.75	□□□□□ -0.21
ERCC1-208	ENST00000589165	TTC30B	Q8N4P2	665 aa		13.75	□□□□□ -0.21
ERCC1-208	ENST00000589165	SLC35B2	Q8TB61	432 aa		13.75	□□□□□ -0.21
ERCC1-208	ENST00000589165	SPATA16	Q9BXB7	569 aa		13.75	□□□□□ -0.21
ERCC1-208	ENST00000589165	SPATS2L	Q9NUQ6	558 aa	Known RBP	13.75	□□□□□ -0.21
ERCC1-208	ENST00000589165	TAAR2	Q9P1P5	351 aa		13.75	□□□□□ -0.21
ERCC1-208	ENST00000589165	APPL1	Q9UKG1	709 aa		13.75	□□□□□ -0.21
ERCC1-208	ENST00000589165	R3HDM2	Q9Y2K5	976 aa	Known RBP	13.75	□□□□□ -0.21
ERCC1-208	ENST00000589165	OAS3	Q9Y6K5	1087 aa	Known RBP	13.75	□□□□□ -0.21
ERCC1-208	ENST00000589165	ASXL3	Q9C0F0	2248 aa		13.75	□□□□□ -0.21
ERCC1-208	ENST00000589165	ACACA	Q13085	2346 aa		13.75	□□□□□ -0.21
ERCC1-208	ENST00000589165	TCRBV7S2A1N4T	A0A589	114 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	GPR89A	B7ZAQ6	455 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	TAF4	O00268	1085 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	NTN3	O00634	580 aa	Predicted RBP	13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	PPFIA2	O75334	1257 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	ASMTL	O95671	621 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	ATP1A1	P05023	1023 aa	Known RBP	13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	GPR89B	P0CG08	455 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	PSMB4	P28070	264 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	ZNF569	Q5MCW4	686 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	ALS2CL	Q60I27	953 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	GALNT13	Q8IUC8	556 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	SLC25A41	Q8N5S1	370 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	CCDC110	Q8TBZ0	833 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	MDM1	Q8TC05	714 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	CCDC74A	Q96AQ1	378 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	ALS2CR12	Q96Q35	445 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	CARD9	Q9H257	536 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	IL17C	Q9P0M4	197 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	GPSM3	Q9Y4H4	160 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	BPTF	Q12830	3046 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165		B4DGG1	531 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	CS	O75390	466 aa	Known RBP	13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	AGT	P01019	485 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	SLC4A1	P02730	911 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	AK4	P27144	223 aa	Predicted RBP	13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	CYP4F3	Q08477	520 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	RPS6KA1	Q15418	735 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	ISX	Q2M1V0	245 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	PARP6	Q2NL67	630 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	SEL1L2	Q5TEA6	688 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	SLC30A9	Q6PML9	568 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	RBM44	Q6ZP01	1051 aa	Known RBP	13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	MARK2	Q7KZI7	788 aa	Known RBP	13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	GLT6D1	Q7Z4J2	308 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	SFTPA2	Q8IWL1	248 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	FAM71D	Q8N9W8	422 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	ZDHHC1	Q8WTX9	485 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	GLYATL1	Q969I3	302 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	VPS35	Q96QK1	796 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	FICD	Q9BVA6	458 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	SUDS3	Q9H7L9	328 aa	Predicted RBP	13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	TRIM39	Q9HCM9	518 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	IL26	Q9NPH9	171 aa		13.74	□□□□□ -0.21
ERCC1-208	ENST00000589165	LZTFL1	Q9NQ48	299 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms