RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 HLA-DQB2P05538 268 aa16.39■□□□□ 0.21
RANBP3-209ENST00000587411 USP17L7P0C7H9 530 aa16.39■□□□□ 0.21
RANBP3-209ENST00000587411 HOXB8P17481 243 aaPredicted RBP16.39■□□□□ 0.21
RANBP3-209ENST00000587411 AKAP5P24588 427 aa16.39■□□□□ 0.21
RANBP3-209ENST00000587411 TOP3AQ13472 1001 aaPredicted RBP16.39■□□□□ 0.21
RANBP3-209ENST00000587411 PCBP1Q15365 356 aaKnown RBP eCLIP16.39■□□□□ 0.21
RANBP3-209ENST00000587411 ZIK1Q3SY52 487 aaPredicted RBP16.39■□□□□ 0.21
RANBP3-209ENST00000587411 ITIH5Q86UX2 942 aa16.39■□□□□ 0.21
RANBP3-209ENST00000587411 PPTC7Q8NI37 304 aa16.39■□□□□ 0.21
RANBP3-209ENST00000587411 PTERQ96BW5 349 aa16.39■□□□□ 0.21
RANBP3-209ENST00000587411 DCPSQ96C86 337 aaKnown RBP16.39■□□□□ 0.21
RANBP3-209ENST00000587411 VMP1Q96GC9 406 aa16.39■□□□□ 0.21
RANBP3-209ENST00000587411 BCL7BQ9BQE9 202 aa16.39■□□□□ 0.21
RANBP3-209ENST00000587411 FUNDC2Q9BWH2 189 aa16.39■□□□□ 0.21
RANBP3-209ENST00000587411 TRIM8Q9BZR9 551 aa16.39■□□□□ 0.21
RANBP3-209ENST00000587411 TSPYL2Q9H2G4 693 aaPredicted RBP16.39■□□□□ 0.21
RANBP3-209ENST00000587411 TUBB1Q9H4B7 451 aa16.39■□□□□ 0.21
RANBP3-209ENST00000587411 NTN4Q9HB63 628 aa16.39■□□□□ 0.21
RANBP3-209ENST00000587411 AKIP1Q9NQ31 210 aa16.39■□□□□ 0.21
RANBP3-209ENST00000587411 RBM22Q9NW64 420 aaKnown RBP eCLIP16.39■□□□□ 0.21
RANBP3-209ENST00000587411 SHROOM3Q8TF72 1996 aa16.39■□□□□ 0.21
RANBP3-209ENST00000587411 KDM1AO60341 852 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 MT-ND1P03886 318 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 ENO2P09104 434 aaPredicted RBP16.38■□□□□ 0.21
RANBP3-209ENST00000587411 ZNF286BP0CG31 522 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 CD1DP15813 335 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 HRH2P25021 359 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 HPCAL1P37235 193 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 FOXA1P55317 472 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 SPCS2Q15005 226 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 GRIK4Q16099 956 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 CLEC4FQ8N1N0 589 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 TMEM199Q8N511 208 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 RNF34Q969K3 372 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 MUL1Q969V5 352 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 EFHD2Q96C19 240 aaPredicted RBP16.38■□□□□ 0.21
RANBP3-209ENST00000587411 BTN2A3PQ96KV6 586 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 ATXN3LQ9H3M9 355 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 AIG1Q9NVV5 245 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 POLR3BQ9NW08 1133 aaPredicted RBP16.38■□□□□ 0.21
RANBP3-209ENST00000587411 TMEM45AQ9NWC5 275 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 ASPDHA6ND91 283 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 CCDC154A6NI56 674 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 CYBBP04839 570 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 LINC00032P0C843 101 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 GSTT2P0CG29 244 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 GSTT2BP0CG30 244 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 HTR7P34969 479 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 SERPINH1P50454 418 aaKnown RBP16.38■□□□□ 0.21
RANBP3-209ENST00000587411 WNT3AP56704 352 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 EMX2Q04743 252 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 XKR4Q5GH76 650 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 AGAP7PQ5VUJ5 663 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 TMEM214Q6NUQ4 689 aaKnown RBP16.38■□□□□ 0.21
RANBP3-209ENST00000587411 FKBP9P1Q75LS8 142 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 ANKRD13BQ86YJ7 626 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 SPNS2Q8IVW8 549 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 KIAA2013Q8IYS2 634 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 SLC22A17Q8WUG5 538 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 EXT2Q93063 718 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 SMOQ99835 787 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 LRRC3Q9BY71 257 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 MFSD1Q9H3U5 465 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 NEU3Q9UQ49 428 aa16.38■□□□□ 0.21
RANBP3-209ENST00000587411 ASB14A6NK59 587 aa16.37■□□□□ 0.21
RANBP3-209ENST00000587411 H3BMM5 538 aa16.37■□□□□ 0.21
RANBP3-209ENST00000587411 UPK1AO00322 258 aa16.37■□□□□ 0.21
RANBP3-209ENST00000587411 GABRDO14764 452 aa16.37■□□□□ 0.21
RANBP3-209ENST00000587411 FGF10O15520 208 aaPredicted RBP16.37■□□□□ 0.21
RANBP3-209ENST00000587411 S1PR4O95977 384 aa16.37■□□□□ 0.21
RANBP3-209ENST00000587411 GJA8P48165 433 aa16.37■□□□□ 0.21
RANBP3-209ENST00000587411 APLP1P51693 650 aa16.37■□□□□ 0.21
RANBP3-209ENST00000587411 RAD23AP54725 363 aa16.37■□□□□ 0.21
RANBP3-209ENST00000587411 CDC42EP1Q00587 391 aa16.37■□□□□ 0.21
RANBP3-209ENST00000587411 AQP6Q13520 282 aa16.37■□□□□ 0.21
RANBP3-209ENST00000587411 FUT11Q495W5 492 aa16.37■□□□□ 0.21
RANBP3-209ENST00000587411 PYCR3Q53H96 274 aa16.37■□□□□ 0.21
RANBP3-209ENST00000587411 PAGE3Q5JUK9 113 aa16.37■□□□□ 0.21
RANBP3-209ENST00000587411 MARCH8Q5T0T0 291 aa16.37■□□□□ 0.21
RANBP3-209ENST00000587411 PRR23BQ6ZRT6 265 aa16.37■□□□□ 0.21
RANBP3-209ENST00000587411 SLC16A12Q6ZSM3 486 aa16.37■□□□□ 0.21
RANBP3-209ENST00000587411 GPRIN1Q7Z2K8 1008 aa16.37■□□□□ 0.21
RANBP3-209ENST00000587411 EFL1Q7Z2Z2 1120 aaKnown RBP16.37■□□□□ 0.21
RANBP3-209ENST00000587411 PIK3C3Q8NEB9 887 aa16.37■□□□□ 0.21
RANBP3-209ENST00000587411 RHEBL1Q8TAI7 183 aa16.37■□□□□ 0.21
RANBP3-209ENST00000587411 EDEM1Q92611 657 aa16.37■□□□□ 0.21
RANBP3-209ENST00000587411 TMBIM1Q969X1 311 aa16.37■□□□□ 0.21
RANBP3-209ENST00000587411 VPS33AQ96AX1 596 aa16.37■□□□□ 0.21
RANBP3-209ENST00000587411 SDCCAG3Q96C92 435 aa16.37■□□□□ 0.21
RANBP3-209ENST00000587411 C16orf70Q9BSU1 422 aa16.37■□□□□ 0.21
RANBP3-209ENST00000587411 RGS18Q9NS28 235 aa16.37■□□□□ 0.21
RANBP3-209ENST00000587411 BAG5Q9UL15 447 aa16.37■□□□□ 0.21
RANBP3-209ENST00000587411 PDE10AQ9Y233 779 aa16.37■□□□□ 0.21
RANBP3-209ENST00000587411 TSC22D4Q9Y3Q8 395 aa16.37■□□□□ 0.21
RANBP3-209ENST00000587411 PCDHB3Q9Y5E6 796 aa16.37■□□□□ 0.21
RANBP3-209ENST00000587411 SNX5Q9Y5X3 404 aa16.37■□□□□ 0.21
RANBP3-209ENST00000587411 GRXCR2A6NFK2 248 aa16.37■□□□□ 0.21
RANBP3-209ENST00000587411 TBC1D4O60343 1298 aa16.37■□□□□ 0.21
RANBP3-209ENST00000587411 PRR35P0CG20 571 aa16.37■□□□□ 0.21
RANBP3-209ENST00000587411 RAP2AP10114 183 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms