RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 ATP1A1P05023 1023 aaKnown RBP19.2■□□□□ 0.66
TRAF4-216ENST00000586813 HLA-DQB2P05538 268 aa19.2■□□□□ 0.66
TRAF4-216ENST00000586813 LIFP15018 202 aa19.2■□□□□ 0.66
TRAF4-216ENST00000586813 CCNCP24863 283 aa19.2■□□□□ 0.66
TRAF4-216ENST00000586813 GJC1P36383 396 aa19.2■□□□□ 0.66
TRAF4-216ENST00000586813 RAB15P59190 212 aa19.2■□□□□ 0.66
TRAF4-216ENST00000586813 RPL26P61254 145 aaKnown RBP19.2■□□□□ 0.66
TRAF4-216ENST00000586813 ATP13A4Q4VNC1 1196 aa19.2■□□□□ 0.66
TRAF4-216ENST00000586813 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.2■□□□□ 0.66
TRAF4-216ENST00000586813 ATG14Q6ZNE5 492 aa19.2■□□□□ 0.66
TRAF4-216ENST00000586813 BMPERQ8N8U9 685 aa19.2■□□□□ 0.66
TRAF4-216ENST00000586813 TSGA13Q96PP4 275 aa19.2■□□□□ 0.66
TRAF4-216ENST00000586813 LYSMD1Q96S90 227 aa19.2■□□□□ 0.66
TRAF4-216ENST00000586813 ASPSCR1Q9BZE9 553 aa19.2■□□□□ 0.66
TRAF4-216ENST00000586813 PCDH9Q9HC56 1237 aa19.2■□□□□ 0.66
TRAF4-216ENST00000586813 GEMIN8Q9NWZ8 242 aaKnown RBP19.2■□□□□ 0.66
TRAF4-216ENST00000586813 ZNHIT2Q9UHR6 403 aa19.2■□□□□ 0.66
TRAF4-216ENST00000586813 RPL26L1Q9UNX3 145 aaKnown RBP19.2■□□□□ 0.66
TRAF4-216ENST00000586813 PRKAB1Q9Y478 270 aa19.2■□□□□ 0.66
TRAF4-216ENST00000586813 OAS3Q9Y6K5 1087 aaKnown RBP19.2■□□□□ 0.66
TRAF4-216ENST00000586813 UBR5O95071 2799 aaPredicted RBP19.2■□□□□ 0.66
TRAF4-216ENST00000586813 SUV39H1O43463 412 aa19.19■□□□□ 0.66
TRAF4-216ENST00000586813 PPFIA2O75334 1257 aa19.19■□□□□ 0.66
TRAF4-216ENST00000586813 PBX1P40424 430 aa19.19■□□□□ 0.66
TRAF4-216ENST00000586813 PPM1FP49593 454 aaPredicted RBP19.19■□□□□ 0.66
TRAF4-216ENST00000586813 HHEXQ03014 270 aa19.19■□□□□ 0.66
TRAF4-216ENST00000586813 NIPAL4Q0D2K0 466 aa19.19■□□□□ 0.66
TRAF4-216ENST00000586813 ANKRD20A8PQ5CZ79 823 aa19.19■□□□□ 0.66
TRAF4-216ENST00000586813 DCAF12Q5T6F0 453 aa19.19■□□□□ 0.66
TRAF4-216ENST00000586813 HENMT1Q5T8I9 393 aaKnown RBP19.19■□□□□ 0.66
TRAF4-216ENST00000586813 ANKS6Q68DC2 871 aa19.19■□□□□ 0.66
TRAF4-216ENST00000586813 CHST15Q7LFX5 561 aaPredicted RBP19.19■□□□□ 0.66
TRAF4-216ENST00000586813 CPNE8Q86YQ8 564 aa19.19■□□□□ 0.66
TRAF4-216ENST00000586813 CACNA2D3Q8IZS8 1091 aa19.19■□□□□ 0.66
TRAF4-216ENST00000586813 ZNF564Q8TBZ8 553 aaPredicted RBP19.19■□□□□ 0.66
TRAF4-216ENST00000586813 LRRN4Q8WUT4 740 aa19.19■□□□□ 0.66
TRAF4-216ENST00000586813 COL26A1Q96A83 441 aa19.19■□□□□ 0.66
TRAF4-216ENST00000586813 WDR24Q96S15 920 aa19.19■□□□□ 0.66
TRAF4-216ENST00000586813 TBC1D29Q9UFV1 150 aa19.19■□□□□ 0.66
TRAF4-216ENST00000586813 IL17BQ9UHF5 180 aa19.19■□□□□ 0.66
TRAF4-216ENST00000586813 CNOT6Q9ULM6 557 aaKnown RBP19.19■□□□□ 0.66
TRAF4-216ENST00000586813 C1orf232A0A0U1RR37 186 aa19.18■□□□□ 0.66
TRAF4-216ENST00000586813 FADS2P1A8MWK0 482 aa19.18■□□□□ 0.66
TRAF4-216ENST00000586813 RAD1O60671 282 aa19.18■□□□□ 0.66
TRAF4-216ENST00000586813 SPINT3P49223 89 aa19.18■□□□□ 0.66
TRAF4-216ENST00000586813 ZBED6P86452 979 aa19.18■□□□□ 0.66
TRAF4-216ENST00000586813 NFKBIBQ15653 356 aa19.18■□□□□ 0.66
TRAF4-216ENST00000586813 CAVIN1Q6NZI2 390 aaKnown RBP19.18■□□□□ 0.66
TRAF4-216ENST00000586813 ALKBH5Q6P6C2 394 aaKnown RBP19.18■□□□□ 0.66
TRAF4-216ENST00000586813 BORAQ6PGQ7 559 aa19.18■□□□□ 0.66
TRAF4-216ENST00000586813 WDR74Q6RFH5 385 aaPredicted RBP19.18■□□□□ 0.66
TRAF4-216ENST00000586813 KCTD6Q8NC69 237 aa19.18■□□□□ 0.66
TRAF4-216ENST00000586813 SLC25A18Q9H1K4 315 aa19.18■□□□□ 0.66
TRAF4-216ENST00000586813 STN1Q9H668 368 aaKnown RBP19.18■□□□□ 0.66
TRAF4-216ENST00000586813 SARS2Q9NP81 518 aaKnown RBP19.18■□□□□ 0.66
TRAF4-216ENST00000586813 KCNK6Q9Y257 313 aa19.18■□□□□ 0.66
TRAF4-216ENST00000586813 ACP5P13686 325 aa19.17■□□□□ 0.66
TRAF4-216ENST00000586813 GBE1Q04446 702 aa19.17■□□□□ 0.66
TRAF4-216ENST00000586813 NFATC2Q13469 925 aa19.17■□□□□ 0.66
TRAF4-216ENST00000586813 PDK2Q15119 407 aa19.17■□□□□ 0.66
TRAF4-216ENST00000586813 SNAP47Q5SQN1 464 aa19.17■□□□□ 0.66
TRAF4-216ENST00000586813 IYDQ6PHW0 289 aa19.17■□□□□ 0.66
TRAF4-216ENST00000586813 PQLC3Q8N755 202 aa19.17■□□□□ 0.66
TRAF4-216ENST00000586813 FAF2Q96CS3 445 aa19.17■□□□□ 0.66
TRAF4-216ENST00000586813 HDAC11Q96DB2 347 aa19.17■□□□□ 0.66
TRAF4-216ENST00000586813 RTP4Q96DX8 246 aa19.17■□□□□ 0.66
TRAF4-216ENST00000586813 TEFMQ96QE5 360 aaKnown RBP19.17■□□□□ 0.66
TRAF4-216ENST00000586813 HERPUD2Q9BSE4 406 aa19.17■□□□□ 0.66
TRAF4-216ENST00000586813 ADNPQ9H2P0 1102 aa19.17■□□□□ 0.66
TRAF4-216ENST00000586813 FAM83DQ9H4H8 585 aa19.17■□□□□ 0.66
TRAF4-216ENST00000586813 RMI1Q9H9A7 625 aa19.17■□□□□ 0.66
TRAF4-216ENST00000586813 PKD2L2Q9NZM6 624 aa19.17■□□□□ 0.66
TRAF4-216ENST00000586813 PILRAQ9UKJ1 303 aa19.17■□□□□ 0.66
TRAF4-216ENST00000586813 A6NCN8 305 aa19.16■□□□□ 0.66
TRAF4-216ENST00000586813 A8MU76 341 aa19.16■□□□□ 0.66
TRAF4-216ENST00000586813 MX2P20592 715 aa19.16■□□□□ 0.66
TRAF4-216ENST00000586813 FANCCQ00597 558 aa19.16■□□□□ 0.66
TRAF4-216ENST00000586813 QPCTQ16769 361 aa19.16■□□□□ 0.66
TRAF4-216ENST00000586813 LYSMD3Q7Z3D4 306 aa19.16■□□□□ 0.66
TRAF4-216ENST00000586813 ARHGAP22Q7Z5H3 698 aa19.16■□□□□ 0.66
TRAF4-216ENST00000586813 MAP7D3Q8IWC1 876 aa19.16■□□□□ 0.66
TRAF4-216ENST00000586813 CPLX3Q8WVH0 158 aa19.16■□□□□ 0.66
TRAF4-216ENST00000586813 SH3KBP1Q96B97 665 aa19.16■□□□□ 0.66
TRAF4-216ENST00000586813 CAPN11Q9UMQ6 739 aa19.16■□□□□ 0.66
TRAF4-216ENST00000586813 NENFQ9UMX5 172 aa19.16■□□□□ 0.66
TRAF4-216ENST00000586813 ZNF891A8MT65 544 aaPredicted RBP19.15■□□□□ 0.66
TRAF4-216ENST00000586813 ANKRD66B4E2M5 251 aa19.15■□□□□ 0.66
TRAF4-216ENST00000586813 ARHGAP6O43182 974 aa19.15■□□□□ 0.66
TRAF4-216ENST00000586813 PROSCO94903 275 aa19.15■□□□□ 0.66
TRAF4-216ENST00000586813 MMP2P08253 660 aa19.15■□□□□ 0.66
TRAF4-216ENST00000586813 F3P13726 295 aa19.15■□□□□ 0.66
TRAF4-216ENST00000586813 SLC2A4P14672 509 aa19.15■□□□□ 0.66
TRAF4-216ENST00000586813 CD86P42081 329 aa19.15■□□□□ 0.66
TRAF4-216ENST00000586813 EPHA4P54764 986 aa19.15■□□□□ 0.66
TRAF4-216ENST00000586813 POLE2P56282 527 aa19.15■□□□□ 0.66
TRAF4-216ENST00000586813 TAS2R40P59535 323 aa19.15■□□□□ 0.66
TRAF4-216ENST00000586813 MC2RQ01718 297 aa19.15■□□□□ 0.66
TRAF4-216ENST00000586813 SLC10A2Q12908 348 aaPredicted RBP19.15■□□□□ 0.66
TRAF4-216ENST00000586813 SLC9B2Q86UD5 537 aa19.15■□□□□ 0.66
TRAF4-216ENST00000586813 CCDC13Q8IYE1 715 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms