RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 NCOR2Q9Y618 2525 aa12.6□□□□□ -0.39
VMP1-202ENST00000585847 CCDC189A1A4V9 331 aa12.59□□□□□ -0.39
VMP1-202ENST00000585847 NPIPB15A6NHN6 443 aaPredicted RBP12.59□□□□□ -0.39
VMP1-202ENST00000585847 F8W8V4 182 aa12.59□□□□□ -0.39
VMP1-202ENST00000585847 PSMD11O00231 422 aa12.59□□□□□ -0.39
VMP1-202ENST00000585847 ZWINTO95229 277 aa12.59□□□□□ -0.39
VMP1-202ENST00000585847 LHCGRP22888 699 aa12.59□□□□□ -0.39
VMP1-202ENST00000585847 GCAP28676 217 aa12.59□□□□□ -0.39
VMP1-202ENST00000585847 OXTRP30559 389 aa12.59□□□□□ -0.39
VMP1-202ENST00000585847 MMP12P39900 470 aa12.59□□□□□ -0.39
VMP1-202ENST00000585847 SLC26A3P40879 764 aa12.59□□□□□ -0.39
VMP1-202ENST00000585847 SLCO1A2P46721 670 aa12.59□□□□□ -0.39
VMP1-202ENST00000585847 SERPINB8P50452 374 aa12.59□□□□□ -0.39
VMP1-202ENST00000585847 CRADDP78560 199 aa12.59□□□□□ -0.39
VMP1-202ENST00000585847 FGL2Q14314 439 aa12.59□□□□□ -0.39
VMP1-202ENST00000585847 TMEM52BQ4KMG9 183 aa12.59□□□□□ -0.39
VMP1-202ENST00000585847 NEPROQ6NW34 567 aa12.59□□□□□ -0.39
VMP1-202ENST00000585847 FBXL19Q6PCT2 694 aa12.59□□□□□ -0.39
VMP1-202ENST00000585847 PACS1Q6VY07 963 aa12.59□□□□□ -0.39
VMP1-202ENST00000585847 DPPA4Q7L190 304 aa12.59□□□□□ -0.39
VMP1-202ENST00000585847 TTC7BQ86TV6 843 aa12.59□□□□□ -0.39
VMP1-202ENST00000585847 TSPAN33Q86UF1 283 aa12.59□□□□□ -0.39
VMP1-202ENST00000585847 DEFB119Q8N690 84 aa12.59□□□□□ -0.39
VMP1-202ENST00000585847 OR14C36Q8NHC7 312 aa12.59□□□□□ -0.39
VMP1-202ENST00000585847 UHMK1Q8TAS1 419 aaKnown RBP12.59□□□□□ -0.39
VMP1-202ENST00000585847 RAB7BQ96AH8 199 aa12.59□□□□□ -0.39
VMP1-202ENST00000585847 MFSD3Q96ES6 412 aa12.59□□□□□ -0.39
VMP1-202ENST00000585847 TSPAN17Q96FV3 270 aa12.59□□□□□ -0.39
VMP1-202ENST00000585847 CNTNAP3BQ96NU0 1288 aa12.59□□□□□ -0.39
VMP1-202ENST00000585847 RBBP8Q99708 897 aa12.59□□□□□ -0.39
VMP1-202ENST00000585847 GPR174Q9BXC1 333 aa12.59□□□□□ -0.39
VMP1-202ENST00000585847 CNTNAP3Q9BZ76 1288 aa12.59□□□□□ -0.39
VMP1-202ENST00000585847 DUSP15Q9H1R2 295 aaPredicted RBP12.59□□□□□ -0.39
VMP1-202ENST00000585847 DYRK4Q9NR20 520 aa12.59□□□□□ -0.39
VMP1-202ENST00000585847 PSD3Q9NYI0 1048 aa12.59□□□□□ -0.39
VMP1-202ENST00000585847 B4GALT6Q9UBX8 382 aa12.59□□□□□ -0.39
VMP1-202ENST00000585847 GMEB2Q9UKD1 530 aa12.59□□□□□ -0.39
VMP1-202ENST00000585847 NCKAP1Q9Y2A7 1128 aa12.59□□□□□ -0.39
VMP1-202ENST00000585847 FAM47DPA6NHR8 397 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 SMIM23A6NLE4 172 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 STX7O15400 261 aaKnown RBP12.58□□□□□ -0.4
VMP1-202ENST00000585847 VAPBO95292 243 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 SEMA4FO95754 770 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 IGHV4-34P06331 123 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 GSTA1P08263 222 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 TPH1P17752 444 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 HNF1BP35680 557 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 LEPRP48357 1165 aaKnown RBP12.58□□□□□ -0.4
VMP1-202ENST00000585847 CD151P48509 253 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 CCT5P48643 541 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 TTPAP49638 278 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 KPNA2P52292 529 aaKnown RBP12.58□□□□□ -0.4
VMP1-202ENST00000585847 ADARP55265 1226 aaKnown RBP12.58□□□□□ -0.4
VMP1-202ENST00000585847 GABPB1Q06547 395 aaPredicted RBP12.58□□□□□ -0.4
VMP1-202ENST00000585847 ELP6Q0PNE2 266 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 CNGA3Q16281 694 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 INSCQ1MX18 579 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 PLK5Q496M5 336 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 GPR33Q49SQ1 333 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 TMEM259Q4ZIN3 620 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 HSP90AA5PQ58FG0 334 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 TEDDM1Q5T9Z0 273 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 SEL1L3Q68CR1 1132 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 PMS2CLQ68D20 193 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 ERAP2Q6P179 960 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 TRMT10BQ6PF06 316 aaKnown RBP12.58□□□□□ -0.4
VMP1-202ENST00000585847 CRTC1Q6UUV9 634 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 LIPIQ6XZB0 460 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 C2CD4AQ8NCU7 369 aaPredicted RBP12.58□□□□□ -0.4
VMP1-202ENST00000585847 OR13J1Q8NGT2 312 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 OR2T34Q8NGX1 318 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 GANCQ8TET4 914 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 EID2BQ96D98 161 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 FCRL3Q96P31 734 aaPredicted RBP12.58□□□□□ -0.4
VMP1-202ENST00000585847 PLEKHG4BQ96PX9 1271 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 IQCGQ9H095 443 aaKnown RBP12.58□□□□□ -0.4
VMP1-202ENST00000585847 KDM4CQ9H3R0 1056 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 POPDC3Q9HBV1 291 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 PREBQ9HCU5 417 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 MID2Q9UJV3 735 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 ZNF711Q9Y462 761 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 SPO11Q9Y5K1 396 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 SLCO1B1Q9Y6L6 691 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 GON4LQ3T8J9 2241 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 SDK1Q7Z5N4 2213 aa12.58□□□□□ -0.4
VMP1-202ENST00000585847 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 METTL12A8MUP2 240 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 A8MX80 341 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 AURKAO14965 403 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 RNGTTO60942 597 aaKnown RBP12.57□□□□□ -0.4
VMP1-202ENST00000585847 MPOP05164 745 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 ITGA2BP08514 1039 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 C1SP09871 688 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 PIRTP0C851 137 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 COL6A2P12110 1019 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 BRAFP15056 766 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 CD9P21926 228 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 NMBRP28336 390 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 CRABP2P29373 138 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 CNR2P34972 360 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms