RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 DPCR1Q3MIW9 517 aa13.23□□□□□ -0.29
COPS3-218ENST00000584216 MARC1Q5VT66 337 aa13.23□□□□□ -0.29
COPS3-218ENST00000584216 LRRC66Q68CR7 880 aa13.23□□□□□ -0.29
COPS3-218ENST00000584216 TRIM74Q86UV6 250 aa13.23□□□□□ -0.29
COPS3-218ENST00000584216 RASGRP3Q8IV61 690 aa13.23□□□□□ -0.29
COPS3-218ENST00000584216 APLFQ8IW19 511 aaPredicted RBP13.23□□□□□ -0.29
COPS3-218ENST00000584216 MCOLN2Q8IZK6 566 aa13.23□□□□□ -0.29
COPS3-218ENST00000584216 FNIP1Q8TF40 1166 aa13.23□□□□□ -0.29
COPS3-218ENST00000584216 COX14Q96I36 57 aa13.23□□□□□ -0.29
COPS3-218ENST00000584216 C9orf72Q96LT7 481 aa13.23□□□□□ -0.29
COPS3-218ENST00000584216 NSMCE3Q96MG7 304 aa13.23□□□□□ -0.29
COPS3-218ENST00000584216 PCMTD1Q96MG8 357 aaPredicted RBP13.23□□□□□ -0.29
COPS3-218ENST00000584216 KCTD15Q96SI1 283 aaPredicted RBP13.23□□□□□ -0.29
COPS3-218ENST00000584216 AGPAT1Q99943 283 aa13.23□□□□□ -0.29
COPS3-218ENST00000584216 UCK1Q9HA47 277 aa13.23□□□□□ -0.29
COPS3-218ENST00000584216 SAMSN1Q9NSI8 373 aaKnown RBP13.23□□□□□ -0.29
COPS3-218ENST00000584216 CPNE7Q9UBL6 633 aa13.23□□□□□ -0.29
COPS3-218ENST00000584216 TBC1D29Q9UFV1 150 aa13.23□□□□□ -0.29
COPS3-218ENST00000584216 PCSK1NQ9UHG2 260 aa13.23□□□□□ -0.29
COPS3-218ENST00000584216 TLK1Q9UKI8 766 aa13.23□□□□□ -0.29
COPS3-218ENST00000584216 PCDHGA6Q9Y5G7 932 aa13.23□□□□□ -0.29
COPS3-218ENST00000584216 OAS3Q9Y6K5 1087 aaKnown RBP13.23□□□□□ -0.29
COPS3-218ENST00000584216 TTC24A2A3L6 582 aaPredicted RBP13.22□□□□□ -0.29
COPS3-218ENST00000584216 PIPSLA2A3N6 862 aa13.22□□□□□ -0.29
COPS3-218ENST00000584216 C21orf140B9A014 251 aa13.22□□□□□ -0.29
COPS3-218ENST00000584216 H3BRJ5 948 aa13.22□□□□□ -0.29
COPS3-218ENST00000584216 SNX2O60749 519 aa13.22□□□□□ -0.29
COPS3-218ENST00000584216 DNAJC6O75061 913 aa13.22□□□□□ -0.29
COPS3-218ENST00000584216 CREG1O75629 220 aa13.22□□□□□ -0.29
COPS3-218ENST00000584216 NDUFA10O95299 355 aa13.22□□□□□ -0.29
COPS3-218ENST00000584216 EML2O95834 649 aa13.22□□□□□ -0.29
COPS3-218ENST00000584216 C9P02748 559 aa13.22□□□□□ -0.29
COPS3-218ENST00000584216 ATP1A3P13637 1013 aa13.22□□□□□ -0.29
COPS3-218ENST00000584216 CTPS1P17812 591 aa13.22□□□□□ -0.29
COPS3-218ENST00000584216 CA4P22748 312 aa13.22□□□□□ -0.29
COPS3-218ENST00000584216 F8A1P23610 371 aa13.22□□□□□ -0.29
COPS3-218ENST00000584216 VARSP26640 1264 aaKnown RBP13.22□□□□□ -0.29
COPS3-218ENST00000584216 SERPINB6P35237 376 aa13.22□□□□□ -0.29
COPS3-218ENST00000584216 ARL4AP40617 200 aa13.22□□□□□ -0.29
COPS3-218ENST00000584216 MMP13P45452 471 aa13.22□□□□□ -0.29
COPS3-218ENST00000584216 PGDP52209 483 aa13.22□□□□□ -0.29
COPS3-218ENST00000584216 EPHB1P54762 984 aa13.22□□□□□ -0.29
COPS3-218ENST00000584216 CDH6P55285 790 aa13.22□□□□□ -0.29
COPS3-218ENST00000584216 ACAD10Q6JQN1 1059 aa13.22□□□□□ -0.29
COPS3-218ENST00000584216 TMCO3Q6UWJ1 677 aa13.22□□□□□ -0.29
COPS3-218ENST00000584216 ATPAF2Q8N5M1 289 aa13.22□□□□□ -0.29
COPS3-218ENST00000584216 GALNT6Q8NCL4 622 aa13.22□□□□□ -0.29
COPS3-218ENST00000584216 NEK11Q8NG66 645 aa13.22□□□□□ -0.29
COPS3-218ENST00000584216 THAP4Q8WY91 577 aa13.22□□□□□ -0.29
COPS3-218ENST00000584216 SCAMP4Q969E2 229 aa13.22□□□□□ -0.29
COPS3-218ENST00000584216 PADI1Q9ULC6 663 aa13.22□□□□□ -0.29
COPS3-218ENST00000584216 NOTCH2Q04721 2471 aa13.22□□□□□ -0.29
COPS3-218ENST00000584216 NBASA2RRP1 2371 aa13.22□□□□□ -0.29
COPS3-218ENST00000584216 ARHGEF17Q96PE2 2063 aaPredicted RBP13.22□□□□□ -0.29
COPS3-218ENST00000584216 K7EM74 188 aa13.21□□□□□ -0.29
COPS3-218ENST00000584216 RASSF9O75901 435 aa13.21□□□□□ -0.29
COPS3-218ENST00000584216 KIAA0754O94854 1291 aa13.21□□□□□ -0.29
COPS3-218ENST00000584216 ACP5P13686 325 aa13.21□□□□□ -0.29
COPS3-218ENST00000584216 AMD1P17707 334 aa13.21□□□□□ -0.29
COPS3-218ENST00000584216 KLK7P49862 253 aa13.21□□□□□ -0.29
COPS3-218ENST00000584216 OGDHQ02218 1023 aa13.21□□□□□ -0.29
COPS3-218ENST00000584216 PTSQ03393 145 aa13.21□□□□□ -0.29
COPS3-218ENST00000584216 MAMLD1Q13495 774 aa13.21□□□□□ -0.29
COPS3-218ENST00000584216 SEMA5AQ13591 1074 aa13.21□□□□□ -0.29
COPS3-218ENST00000584216 DNASE1L3Q13609 305 aa13.21□□□□□ -0.29
COPS3-218ENST00000584216 DPYSQ14117 519 aa13.21□□□□□ -0.29
COPS3-218ENST00000584216 HIST2H2BCQ6DN03 193 aa13.21□□□□□ -0.29
COPS3-218ENST00000584216 TRIM48Q8IWZ4 208 aa13.21□□□□□ -0.29
COPS3-218ENST00000584216 PGBD5Q8N414 524 aa13.21□□□□□ -0.29
COPS3-218ENST00000584216 PIH1D2Q8WWB5 315 aa13.21□□□□□ -0.29
COPS3-218ENST00000584216 OR6C1Q96RD1 312 aa13.21□□□□□ -0.29
COPS3-218ENST00000584216 RIOK2Q9BVS4 552 aaKnown RBP13.21□□□□□ -0.29
COPS3-218ENST00000584216 TBC1D10AQ9BXI6 508 aa13.21□□□□□ -0.29
COPS3-218ENST00000584216 SLC29A3Q9BZD2 475 aa13.21□□□□□ -0.29
COPS3-218ENST00000584216 ZNF768Q9H5H4 540 aaKnown RBP13.21□□□□□ -0.29
COPS3-218ENST00000584216 CWC15Q9P013 229 aaKnown RBP13.21□□□□□ -0.29
COPS3-218ENST00000584216 LNPEPQ9UIQ6 1025 aa13.21□□□□□ -0.29
COPS3-218ENST00000584216 KCNK6Q9Y257 313 aa13.21□□□□□ -0.29
COPS3-218ENST00000584216 SPTAN1Q13813 2472 aaKnown RBP13.21□□□□□ -0.29
COPS3-218ENST00000584216 NBPF19A0A087WUL8 3843 aa13.2□□□□□ -0.3
COPS3-218ENST00000584216 A0A0J9YYE9 177 aa13.2□□□□□ -0.3
COPS3-218ENST00000584216 A6NCN8 305 aa13.2□□□□□ -0.3
COPS3-218ENST00000584216 GOLGA6L3A6NEY3 463 aa13.2□□□□□ -0.3
COPS3-218ENST00000584216 EPHB6O15197 1021 aa13.2□□□□□ -0.3
COPS3-218ENST00000584216 MAFKO60675 156 aa13.2□□□□□ -0.3
COPS3-218ENST00000584216 LRCH4O75427 683 aa13.2□□□□□ -0.3
COPS3-218ENST00000584216 UBXN7O94888 489 aa13.2□□□□□ -0.3
COPS3-218ENST00000584216 PEX11BO96011 259 aa13.2□□□□□ -0.3
COPS3-218ENST00000584216 TRBC1P01850 177 aa13.2□□□□□ -0.3
COPS3-218ENST00000584216 ATP1A1P05023 1023 aaKnown RBP13.2□□□□□ -0.3
COPS3-218ENST00000584216 FURINP09958 794 aa13.2□□□□□ -0.3
COPS3-218ENST00000584216 ZNF28P17035 718 aa13.2□□□□□ -0.3
COPS3-218ENST00000584216 TNFAIP3P21580 790 aa13.2□□□□□ -0.3
COPS3-218ENST00000584216 CES1P23141 567 aa13.2□□□□□ -0.3
COPS3-218ENST00000584216 MIPP30301 263 aa13.2□□□□□ -0.3
COPS3-218ENST00000584216 CLCNKAP51800 687 aa13.2□□□□□ -0.3
COPS3-218ENST00000584216 STC1P52823 247 aa13.2□□□□□ -0.3
COPS3-218ENST00000584216 MAXP61244 160 aa13.2□□□□□ -0.3
COPS3-218ENST00000584216 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.2□□□□□ -0.3
COPS3-218ENST00000584216 PPP1R3BQ86XI6 285 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms