RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 TRIM74Q86UV6 250 aa14.73□□□□□ -0.05
SS18-212ENST00000579061 C17orf82Q86X59 251 aaPredicted RBP14.73□□□□□ -0.05
SS18-212ENST00000579061 GALNT13Q8IUC8 556 aa14.73□□□□□ -0.05
SS18-212ENST00000579061 TRAM1L1Q8N609 369 aa14.73□□□□□ -0.05
SS18-212ENST00000579061 GPR26Q8NDV2 337 aa14.73□□□□□ -0.05
SS18-212ENST00000579061 DTX3LQ8TDB6 740 aa14.73□□□□□ -0.05
SS18-212ENST00000579061 PTCD2Q8WV60 388 aaKnown RBP14.73□□□□□ -0.05
SS18-212ENST00000579061 PPP1R2P1Q96PQ5 205 aa14.73□□□□□ -0.05
SS18-212ENST00000579061 PLEKHG4BQ96PX9 1271 aa14.73□□□□□ -0.05
SS18-212ENST00000579061 SPATA16Q9BXB7 569 aa14.73□□□□□ -0.05
SS18-212ENST00000579061 SPATS2LQ9NUQ6 558 aaKnown RBP14.73□□□□□ -0.05
SS18-212ENST00000579061 TAAR2Q9P1P5 351 aa14.73□□□□□ -0.05
SS18-212ENST00000579061 CAPN6Q9Y6Q1 641 aa14.73□□□□□ -0.05
SS18-212ENST00000579061 PKD1L2Q7Z442 2459 aa14.73□□□□□ -0.05
SS18-212ENST00000579061 GPR89AB7ZAQ6 455 aa14.72□□□□□ -0.05
SS18-212ENST00000579061 DNAJC6O75061 913 aa14.72□□□□□ -0.05
SS18-212ENST00000579061 KRT37O76014 449 aa14.72□□□□□ -0.05
SS18-212ENST00000579061 FTCDO95954 541 aa14.72□□□□□ -0.05
SS18-212ENST00000579061 GPR89BP0CG08 455 aa14.72□□□□□ -0.05
SS18-212ENST00000579061 AK4P27144 223 aaPredicted RBP14.72□□□□□ -0.05
SS18-212ENST00000579061 KLF1Q13351 362 aaPredicted RBP14.72□□□□□ -0.05
SS18-212ENST00000579061 SPIDRQ14159 915 aa14.72□□□□□ -0.05
SS18-212ENST00000579061 SIRPB2Q5JXA9 342 aa14.72□□□□□ -0.05
SS18-212ENST00000579061 ZNF569Q5MCW4 686 aa14.72□□□□□ -0.05
SS18-212ENST00000579061 ANKRD20A2Q5SQ80 823 aa14.72□□□□□ -0.05
SS18-212ENST00000579061 ANKRD20A1Q5TYW2 823 aa14.72□□□□□ -0.05
SS18-212ENST00000579061 ANKRD20A3Q5VUR7 823 aa14.72□□□□□ -0.05
SS18-212ENST00000579061 ZDHHC20Q5W0Z9 365 aa14.72□□□□□ -0.05
SS18-212ENST00000579061 AADACL2Q6P093 401 aa14.72□□□□□ -0.05
SS18-212ENST00000579061 DARS2Q6PI48 645 aaKnown RBP14.72□□□□□ -0.05
SS18-212ENST00000579061 ZNF662Q6ZS27 426 aa14.72□□□□□ -0.05
SS18-212ENST00000579061 LSMEM2Q8N112 164 aa14.72□□□□□ -0.05
SS18-212ENST00000579061 ZDHHC1Q8WTX9 485 aa14.72□□□□□ -0.05
SS18-212ENST00000579061 FSD1LQ9BXM9 530 aa14.72□□□□□ -0.05
SS18-212ENST00000579061 CARD9Q9H257 536 aa14.72□□□□□ -0.05
SS18-212ENST00000579061 SUDS3Q9H7L9 328 aaPredicted RBP14.72□□□□□ -0.05
SS18-212ENST00000579061 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.72□□□□□ -0.052e-6■■□□□ 12
SS18-212ENST00000579061 RABGEF1Q9UJ41 708 aa14.72□□□□□ -0.05
SS18-212ENST00000579061 PACSIN2Q9UNF0 486 aaPredicted RBP14.72□□□□□ -0.05
SS18-212ENST00000579061 AAR2Q9Y312 384 aaKnown RBP14.72□□□□□ -0.05
SS18-212ENST00000579061 GPSM3Q9Y4H4 160 aa14.72□□□□□ -0.05
SS18-212ENST00000579061 PCDHB1Q9Y5F3 818 aa14.72□□□□□ -0.05
SS18-212ENST00000579061 SPO11Q9Y5K1 396 aa14.72□□□□□ -0.05
SS18-212ENST00000579061 ST14Q9Y5Y6 855 aa14.72□□□□□ -0.05
SS18-212ENST00000579061 OAS3Q9Y6K5 1087 aaKnown RBP14.72□□□□□ -0.05
SS18-212ENST00000579061 AK5Q9Y6K8 562 aa14.72□□□□□ -0.05
SS18-212ENST00000579061 TMX2-CTNND1H3BSU7 103 aa14.71□□□□□ -0.05
SS18-212ENST00000579061 KCNN4O15554 427 aa14.71□□□□□ -0.05
SS18-212ENST00000579061 USP12O75317 370 aa14.71□□□□□ -0.05
SS18-212ENST00000579061 DXOO77932 396 aaKnown RBP14.71□□□□□ -0.05
SS18-212ENST00000579061 BPIP17213 487 aa14.71□□□□□ -0.05
SS18-212ENST00000579061 ACTR1BP42025 376 aa14.71□□□□□ -0.05
SS18-212ENST00000579061 LSSP48449 732 aa14.71□□□□□ -0.05
SS18-212ENST00000579061 ACTR1AP61163 376 aa14.71□□□□□ -0.05
SS18-212ENST00000579061 SLC30A9Q6PML9 568 aa14.71□□□□□ -0.05
SS18-212ENST00000579061 IGF2-ASQ6U949 168 aa14.71□□□□□ -0.05
SS18-212ENST00000579061 TTC30BQ8N4P2 665 aa14.71□□□□□ -0.05
SS18-212ENST00000579061 IPMKQ8NFU5 416 aa14.71□□□□□ -0.05
SS18-212ENST00000579061 SPATA13Q96N96 652 aa14.71□□□□□ -0.05
SS18-212ENST00000579061 GFM1Q96RP9 751 aaKnown RBP14.71□□□□□ -0.05
SS18-212ENST00000579061 LRRN3Q9H3W5 708 aa14.71□□□□□ -0.05
SS18-212ENST00000579061 C10orf88Q9H8K7 445 aa14.71□□□□□ -0.05
SS18-212ENST00000579061 POLR1BQ9H9Y6 1135 aa14.71□□□□□ -0.05
SS18-212ENST00000579061 TRIM39Q9HCM9 518 aa14.71□□□□□ -0.05
SS18-212ENST00000579061 LRIT1Q9P2V4 623 aa14.71□□□□□ -0.05
SS18-212ENST00000579061 ZNHIT2Q9UHR6 403 aa14.71□□□□□ -0.05
SS18-212ENST00000579061 ENTPD2Q9Y5L3 495 aa14.71□□□□□ -0.05
SS18-212ENST00000579061 DSPP15924 2871 aaKnown RBP14.7□□□□□ -0.06
SS18-212ENST00000579061 C5orf60A6NFR6 353 aa14.7□□□□□ -0.06
SS18-212ENST00000579061 AURKAO14965 403 aa14.7□□□□□ -0.06
SS18-212ENST00000579061 ZW10O43264 779 aa14.7□□□□□ -0.06
SS18-212ENST00000579061 NUAK1O60285 661 aa14.7□□□□□ -0.06
SS18-212ENST00000579061 PPFIA2O75334 1257 aa14.7□□□□□ -0.06
SS18-212ENST00000579061 SLC25A14O95258 325 aaPredicted RBP14.7□□□□□ -0.06
SS18-212ENST00000579061 ATP1A1P05023 1023 aaKnown RBP14.7□□□□□ -0.06
SS18-212ENST00000579061 PTMAP06454 111 aaKnown RBP14.7□□□□□ -0.06
SS18-212ENST00000579061 ACTN2P35609 894 aa14.7□□□□□ -0.06
SS18-212ENST00000579061 CHRNA4P43681 627 aa14.7□□□□□ -0.06
SS18-212ENST00000579061 CCL7P80098 99 aa14.7□□□□□ -0.06
SS18-212ENST00000579061 PRPSAP1Q14558 356 aa14.7□□□□□ -0.06
SS18-212ENST00000579061 NR1D2Q14995 579 aa14.7□□□□□ -0.06
SS18-212ENST00000579061 ALS2CLQ60I27 953 aa14.7□□□□□ -0.06
SS18-212ENST00000579061 RANBP10Q6VN20 620 aa14.7□□□□□ -0.06
SS18-212ENST00000579061 MARK2Q7KZI7 788 aaKnown RBP14.7□□□□□ -0.06
SS18-212ENST00000579061 ZNF438Q7Z4V0 828 aa14.7□□□□□ -0.06
SS18-212ENST00000579061 SPRED1Q7Z699 444 aa14.7□□□□□ -0.06
SS18-212ENST00000579061 PHYKPLQ8IUZ5 450 aa14.7□□□□□ -0.06
SS18-212ENST00000579061 CCNJLQ8IV13 435 aa14.7□□□□□ -0.06
SS18-212ENST00000579061 KLHDC8BQ8IXV7 354 aa14.7□□□□□ -0.06
SS18-212ENST00000579061 NAGSQ8N159 534 aa14.7□□□□□ -0.06
SS18-212ENST00000579061 ARL14Q8N4G2 192 aa14.7□□□□□ -0.06
SS18-212ENST00000579061 SLC25A41Q8N5S1 370 aa14.7□□□□□ -0.06
SS18-212ENST00000579061 SNIP1Q8TAD8 396 aaKnown RBP14.7□□□□□ -0.06
SS18-212ENST00000579061 GLYATL1Q969I3 302 aa14.7□□□□□ -0.06
SS18-212ENST00000579061 VPS35Q96QK1 796 aa14.7□□□□□ -0.06
SS18-212ENST00000579061 GORASP1Q9BQQ3 440 aa14.7□□□□□ -0.06
SS18-212ENST00000579061 IL17CQ9P0M4 197 aa14.7□□□□□ -0.06
SS18-212ENST00000579061 GUCA1BQ9UMX6 200 aa14.7□□□□□ -0.06
SS18-212ENST00000579061 RAXQ9Y2V3 346 aa14.7□□□□□ -0.06
SS18-212ENST00000579061 RNF215Q9Y6U7 377 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms