RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 SUFUQ9UMX1 484 aa13.18□□□□□ -0.3
RPAIN-216ENST00000575599 TMEM98Q9Y2Y6 226 aa13.18□□□□□ -0.3
RPAIN-216ENST00000575599 AAR2Q9Y312 384 aaKnown RBP13.18□□□□□ -0.3
RPAIN-216ENST00000575599 NEUROG3Q9Y4Z2 214 aa13.18□□□□□ -0.3
RPAIN-216ENST00000575599 MRFAP1Q9Y605 127 aa13.18□□□□□ -0.3
RPAIN-216ENST00000575599 U3KQA8 63 aa13.18□□□□□ -0.3
RPAIN-216ENST00000575599 PTPRBP23467 1997 aa13.17□□□□□ -0.3
RPAIN-216ENST00000575599 GOLGA6L10A0A0M3HER8 536 aa13.17□□□□□ -0.3
RPAIN-216ENST00000575599 CPED1A4D0V7 1026 aa13.17□□□□□ -0.3
RPAIN-216ENST00000575599 RGSL1A5PLK6 1076 aa13.17□□□□□ -0.3
RPAIN-216ENST00000575599 FAM149AA5PLN7 773 aa13.17□□□□□ -0.3
RPAIN-216ENST00000575599 ASMTLO95671 621 aa13.17□□□□□ -0.3
RPAIN-216ENST00000575599 EPOP01588 193 aa13.17□□□□□ -0.3
RPAIN-216ENST00000575599 FGGP02679 453 aa13.17□□□□□ -0.3
RPAIN-216ENST00000575599 FGF1P05230 155 aa13.17□□□□□ -0.3
RPAIN-216ENST00000575599 DUSP3P51452 185 aaPredicted RBP13.17□□□□□ -0.3
RPAIN-216ENST00000575599 ILKQ13418 452 aa13.17□□□□□ -0.3
RPAIN-216ENST00000575599 SNX1Q13596 522 aa13.17□□□□□ -0.3
RPAIN-216ENST00000575599 GUSBP11Q6P575 273 aa13.17□□□□□ -0.3
RPAIN-216ENST00000575599 TMPRSS7Q7RTY8 843 aa13.17□□□□□ -0.3
RPAIN-216ENST00000575599 NLRP8Q86W28 1048 aa13.17□□□□□ -0.3
RPAIN-216ENST00000575599 SLC35F3Q8IY50 421 aa13.17□□□□□ -0.3
RPAIN-216ENST00000575599 GALNT15Q8N3T1 639 aa13.17□□□□□ -0.3
RPAIN-216ENST00000575599 TAB3Q8N5C8 712 aaPredicted RBP13.17□□□□□ -0.3
RPAIN-216ENST00000575599 KYQ8NBH2 561 aa13.17□□□□□ -0.3
RPAIN-216ENST00000575599 GPR26Q8NDV2 337 aa13.17□□□□□ -0.3
RPAIN-216ENST00000575599 CCL4L1Q8NHW4 92 aa13.17□□□□□ -0.3
RPAIN-216ENST00000575599 IFI44Q8TCB0 444 aa13.17□□□□□ -0.3
RPAIN-216ENST00000575599 ACTRT1Q8TDG2 376 aa13.17□□□□□ -0.3
RPAIN-216ENST00000575599 C1orf54Q8WWF1 131 aa13.17□□□□□ -0.3
RPAIN-216ENST00000575599 GLMNQ92990 594 aa13.17□□□□□ -0.3
RPAIN-216ENST00000575599 MS4A14Q96JA4 679 aa13.17□□□□□ -0.3
RPAIN-216ENST00000575599 BOCQ9BWV1 1114 aa13.17□□□□□ -0.3
RPAIN-216ENST00000575599 NCKIPSDQ9NZQ3 722 aa13.17□□□□□ -0.3
RPAIN-216ENST00000575599 GULP1Q9UBP9 304 aa13.17□□□□□ -0.3
RPAIN-216ENST00000575599 GPR34Q9UPC5 381 aa13.17□□□□□ -0.3
RPAIN-216ENST00000575599 SLC17A4Q9Y2C5 497 aa13.17□□□□□ -0.3
RPAIN-216ENST00000575599 MSRB2Q9Y3D2 182 aa13.17□□□□□ -0.3
RPAIN-216ENST00000575599 SCN8AQ9UQD0 1980 aa13.16□□□□□ -0.3
RPAIN-216ENST00000575599 C5orf60A6NFR6 353 aa13.16□□□□□ -0.3
RPAIN-216ENST00000575599 B4DGG1 531 aa13.16□□□□□ -0.3
RPAIN-216ENST00000575599 LIASO43766 372 aa13.16□□□□□ -0.3
RPAIN-216ENST00000575599 USP12O75317 370 aa13.16□□□□□ -0.3
RPAIN-216ENST00000575599 FUCA1P04066 466 aa13.16□□□□□ -0.3
RPAIN-216ENST00000575599 CDK4P11802 303 aa13.16□□□□□ -0.3
RPAIN-216ENST00000575599 BPIP17213 487 aa13.16□□□□□ -0.3
RPAIN-216ENST00000575599 RPIAP49247 311 aa13.16□□□□□ -0.3
RPAIN-216ENST00000575599 DCDC1P59894 354 aa13.16□□□□□ -0.3
RPAIN-216ENST00000575599 SPARCL1Q14515 664 aa13.16□□□□□ -0.3
RPAIN-216ENST00000575599 SMAD1Q15797 465 aaKnown RBP13.16□□□□□ -0.3
RPAIN-216ENST00000575599 HES3Q5TGS1 186 aa13.16□□□□□ -0.3
RPAIN-216ENST00000575599 LVRNQ6Q4G3 990 aa13.16□□□□□ -0.3
RPAIN-216ENST00000575599 EFL1Q7Z2Z2 1120 aaKnown RBP13.16□□□□□ -0.3
RPAIN-216ENST00000575599 CREG2Q8IUH2 290 aa13.16□□□□□ -0.3
RPAIN-216ENST00000575599 RASGEF1CQ8N431 466 aa13.16□□□□□ -0.3
RPAIN-216ENST00000575599 ARL10Q8N8L6 244 aa13.16□□□□□ -0.3
RPAIN-216ENST00000575599 FAM46DQ8NEK8 389 aa13.16□□□□□ -0.3
RPAIN-216ENST00000575599 COX14Q96I36 57 aa13.16□□□□□ -0.3
RPAIN-216ENST00000575599 PPP1R2P1Q96PQ5 205 aa13.16□□□□□ -0.3
RPAIN-216ENST00000575599 TRABDQ9H4I3 376 aa13.16□□□□□ -0.3
RPAIN-216ENST00000575599 ARFGAP3Q9NP61 516 aa13.16□□□□□ -0.3
RPAIN-216ENST00000575599 RAD18Q9NS91 495 aa13.16□□□□□ -0.3
RPAIN-216ENST00000575599 HACD3Q9P035 362 aa13.16□□□□□ -0.3
RPAIN-216ENST00000575599 GPSM3Q9Y4H4 160 aa13.16□□□□□ -0.3
RPAIN-216ENST00000575599 OAS3Q9Y6K5 1087 aaKnown RBP13.16□□□□□ -0.3
RPAIN-216ENST00000575599 GOLGA4Q13439 2230 aaKnown RBP13.15□□□□□ -0.3
RPAIN-216ENST00000575599 CTAGE15A4D2H0 777 aa13.15□□□□□ -0.3
RPAIN-216ENST00000575599 C1QTNF9BB2RNN3 333 aa13.15□□□□□ -0.3
RPAIN-216ENST00000575599 BUD23O43709 281 aaKnown RBP13.15□□□□□ -0.3
RPAIN-216ENST00000575599 METTL18O95568 372 aa13.15□□□□□ -0.3
RPAIN-216ENST00000575599 IFNB1P01574 187 aa13.15□□□□□ -0.3
RPAIN-216ENST00000575599 IVLP07476 585 aa13.15□□□□□ -0.3
RPAIN-216ENST00000575599 C1QTNF9P0C862 333 aa13.15□□□□□ -0.3
RPAIN-216ENST00000575599 CTAGE8P0CG41 777 aa13.15□□□□□ -0.3
RPAIN-216ENST00000575599 AK4P27144 223 aaPredicted RBP13.15□□□□□ -0.3
RPAIN-216ENST00000575599 ADRA1AP35348 466 aa13.15□□□□□ -0.3
RPAIN-216ENST00000575599 HMGCLP35914 325 aa13.15□□□□□ -0.3
RPAIN-216ENST00000575599 ILF3Q12906 894 aaKnown RBP eCLIP13.15□□□□□ -0.32e-6■■□□□ 12.4
RPAIN-216ENST00000575599 P3H1Q32P28 736 aa13.15□□□□□ -0.3
RPAIN-216ENST00000575599 SLC30A9Q6PML9 568 aa13.15□□□□□ -0.3
RPAIN-216ENST00000575599 UNQ6494/PRO21346Q6UXR6 183 aa13.15□□□□□ -0.3
RPAIN-216ENST00000575599 CTAGE6Q86UF2 777 aa13.15□□□□□ -0.3
RPAIN-216ENST00000575599 GALNT13Q8IUC8 556 aa13.15□□□□□ -0.3
RPAIN-216ENST00000575599 CTAGE4Q8IX94 777 aa13.15□□□□□ -0.3
RPAIN-216ENST00000575599 SDR16C5Q8N3Y7 309 aa13.15□□□□□ -0.3
RPAIN-216ENST00000575599 TTC30BQ8N4P2 665 aa13.15□□□□□ -0.3
RPAIN-216ENST00000575599 TRAM1L1Q8N609 369 aa13.15□□□□□ -0.3
RPAIN-216ENST00000575599 LRRC45Q96CN5 670 aa13.15□□□□□ -0.3
RPAIN-216ENST00000575599 OR2M4Q96R27 311 aa13.15□□□□□ -0.3
RPAIN-216ENST00000575599 TBL1YQ9BQ87 522 aa13.15□□□□□ -0.3
RPAIN-216ENST00000575599 ZSCAN5AQ9BUG6 496 aa13.15□□□□□ -0.3
RPAIN-216ENST00000575599 GSDMCQ9BYG8 508 aa13.15□□□□□ -0.3
RPAIN-216ENST00000575599 FRMD8P1Q9BZ68 369 aaPredicted RBP13.15□□□□□ -0.3
RPAIN-216ENST00000575599 CDH19Q9H159 772 aa13.15□□□□□ -0.3
RPAIN-216ENST00000575599 DPEP2Q9H4A9 486 aa13.15□□□□□ -0.3
RPAIN-216ENST00000575599 CNOT6Q9ULM6 557 aaKnown RBP13.15□□□□□ -0.3
RPAIN-216ENST00000575599 TTC7AQ9ULT0 858 aaPredicted RBP13.15□□□□□ -0.3
RPAIN-216ENST00000575599 ZNF148Q9UQR1 794 aa13.15□□□□□ -0.3
RPAIN-216ENST00000575599 EME2A4GXA9 379 aaPredicted RBP13.14□□□□□ -0.31
RPAIN-216ENST00000575599 GP1BAP07359 652 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms