RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 EVA1BQ9NVM1 165 aa15.1■□□□□ 0.01
LITAF-217ENST00000575426 APPL1Q9UKG1 709 aa15.1■□□□□ 0.01
LITAF-217ENST00000575426 TMEM98Q9Y2Y6 226 aa15.1■□□□□ 0.01
LITAF-217ENST00000575426 GOLGA4Q13439 2230 aaKnown RBP15.09■□□□□ 0.01
LITAF-217ENST00000575426 ARHGEF17Q96PE2 2063 aaPredicted RBP15.09■□□□□ 0.01
LITAF-217ENST00000575426 TPP1O14773 563 aa15.09■□□□□ 0.01
LITAF-217ENST00000575426 GIPC1O14908 333 aa15.09■□□□□ 0.01
LITAF-217ENST00000575426 TNFSF14O43557 240 aa15.09■□□□□ 0.01
LITAF-217ENST00000575426 CBFA2T3O75081 653 aa15.09■□□□□ 0.01
LITAF-217ENST00000575426 ECEL1O95672 775 aa15.09■□□□□ 0.01
LITAF-217ENST00000575426 IVLP07476 585 aa15.09■□□□□ 0.01
LITAF-217ENST00000575426 GNPDA1P46926 289 aa15.09■□□□□ 0.01
LITAF-217ENST00000575426 POLD2P49005 469 aa15.09■□□□□ 0.01
LITAF-217ENST00000575426 SIM1P81133 766 aaPredicted RBP15.09■□□□□ 0.01
LITAF-217ENST00000575426 CDK16Q00536 496 aa15.09■□□□□ 0.01
LITAF-217ENST00000575426 POU6F1Q14863 301 aa15.09■□□□□ 0.01
LITAF-217ENST00000575426 FAM151BQ6UXP7 276 aa15.09■□□□□ 0.01
LITAF-217ENST00000575426 TRIM74Q86UV6 250 aa15.09■□□□□ 0.01
LITAF-217ENST00000575426 PHYKPLQ8IUZ5 450 aa15.09■□□□□ 0.01
LITAF-217ENST00000575426 OR4C6Q8NH72 309 aa15.09■□□□□ 0.01
LITAF-217ENST00000575426 DTX3LQ8TDB6 740 aa15.09■□□□□ 0.01
LITAF-217ENST00000575426 GLMNQ92990 594 aa15.09■□□□□ 0.01
LITAF-217ENST00000575426 GLYATL1Q969I3 302 aa15.09■□□□□ 0.01
LITAF-217ENST00000575426 PDXPQ96GD0 296 aa15.09■□□□□ 0.01
LITAF-217ENST00000575426 LRRC61Q9BV99 259 aa15.09■□□□□ 0.01
LITAF-217ENST00000575426 IL26Q9NPH9 171 aa15.09■□□□□ 0.01
LITAF-217ENST00000575426 EIF2B3Q9NR50 452 aaKnown RBP15.09■□□□□ 0.01
LITAF-217ENST00000575426 PIH1D1Q9NWS0 290 aaKnown RBP15.09■□□□□ 0.01
LITAF-217ENST00000575426 VPS18Q9P253 973 aa15.09■□□□□ 0.01
LITAF-217ENST00000575426 CNOT6Q9ULM6 557 aaKnown RBP15.09■□□□□ 0.01
LITAF-217ENST00000575426 PNMA8BQ9ULN7 279 aaPredicted RBP15.09■□□□□ 0.01
LITAF-217ENST00000575426 SUFUQ9UMX1 484 aa15.09■□□□□ 0.01
LITAF-217ENST00000575426 SLC17A4Q9Y2C5 497 aa15.09■□□□□ 0.01
LITAF-217ENST00000575426 GPSM3Q9Y4H4 160 aa15.09■□□□□ 0.01
LITAF-217ENST00000575426 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.08■□□□□ 0
LITAF-217ENST00000575426 SPAARA0A1B0GVQ0 90 aa15.08■□□□□ 0
LITAF-217ENST00000575426 LMO7DNF2Z398 122 aa15.08■□□□□ 0
LITAF-217ENST00000575426 CCDC188H7C350 402 aa15.08■□□□□ 0
LITAF-217ENST00000575426 SIGLEC6O43699 453 aa15.08■□□□□ 0
LITAF-217ENST00000575426 DUSP3P51452 185 aaPredicted RBP15.08■□□□□ 0
LITAF-217ENST00000575426 TERF1P54274 439 aa15.08■□□□□ 0
LITAF-217ENST00000575426 TMPRSS15P98073 1019 aa15.08■□□□□ 0
LITAF-217ENST00000575426 DAB2P98082 770 aa15.08■□□□□ 0
LITAF-217ENST00000575426 ILF3Q12906 894 aaKnown RBP eCLIP15.08■□□□□ 0
LITAF-217ENST00000575426 MSLNQ13421 630 aaPredicted RBP15.08■□□□□ 0
LITAF-217ENST00000575426 PEX6Q13608 980 aa15.08■□□□□ 0
LITAF-217ENST00000575426 PTPRCAPQ14761 206 aa15.08■□□□□ 0
LITAF-217ENST00000575426 TCEA2Q15560 299 aa15.08■□□□□ 0
LITAF-217ENST00000575426 CHRNA6Q15825 494 aa15.08■□□□□ 0
LITAF-217ENST00000575426 SKIDA1Q1XH10 827 aa15.08■□□□□ 0
LITAF-217ENST00000575426 DEFB133Q30KQ1 61 aa15.08■□□□□ 0
LITAF-217ENST00000575426 ATP13A5Q4VNC0 1218 aa15.08■□□□□ 0
LITAF-217ENST00000575426 LVRNQ6Q4G3 990 aa15.08■□□□□ 0
LITAF-217ENST00000575426 MARK2Q7KZI7 788 aaKnown RBP15.08■□□□□ 0
LITAF-217ENST00000575426 ERMP1Q7Z2K6 904 aa15.08■□□□□ 0
LITAF-217ENST00000575426 TAF8Q7Z7C8 310 aa15.08■□□□□ 0
LITAF-217ENST00000575426 GLRX5Q86SX6 157 aa15.08■□□□□ 0
LITAF-217ENST00000575426 GALNT13Q8IUC8 556 aa15.08■□□□□ 0
LITAF-217ENST00000575426 OR13C4Q8NGS5 318 aa15.08■□□□□ 0
LITAF-217ENST00000575426 BAHD1Q8TBE0 780 aaPredicted RBP15.08■□□□□ 0
LITAF-217ENST00000575426 ZNF398Q8TD17 642 aa15.08■□□□□ 0
LITAF-217ENST00000575426 STYXQ8WUJ0 223 aa15.08■□□□□ 0
LITAF-217ENST00000575426 C16orf45Q96MC5 204 aaPredicted RBP15.08■□□□□ 0
LITAF-217ENST00000575426 TTC25Q96NG3 672 aa15.08■□□□□ 0
LITAF-217ENST00000575426 VPS35Q96QK1 796 aa15.08■□□□□ 0
LITAF-217ENST00000575426 C19orf43Q9BQ61 176 aa15.08■□□□□ 0
LITAF-217ENST00000575426 GSDMCQ9BYG8 508 aa15.08■□□□□ 0
LITAF-217ENST00000575426 CLPBQ9H078 707 aa15.08■□□□□ 0
LITAF-217ENST00000575426 DDX47Q9H0S4 455 aaKnown RBP15.08■□□□□ 0
LITAF-217ENST00000575426 TMEM168Q9H0V1 697 aa15.08■□□□□ 0
LITAF-217ENST00000575426 CAAP1Q9H8G2 361 aa15.08■□□□□ 0
LITAF-217ENST00000575426 RMI1Q9H9A7 625 aa15.08■□□□□ 0
LITAF-217ENST00000575426 TRIM39Q9HCM9 518 aa15.08■□□□□ 0
LITAF-217ENST00000575426 CASS4Q9NQ75 786 aa15.08■□□□□ 0
LITAF-217ENST00000575426 ZNHIT2Q9UHR6 403 aa15.08■□□□□ 0
LITAF-217ENST00000575426 APOBEC2Q9Y235 224 aaKnown RBP15.08■□□□□ 0
LITAF-217ENST00000575426 KCTD3Q9Y597 815 aa15.08■□□□□ 0
LITAF-217ENST00000575426 SLC30A1Q9Y6M5 507 aa15.08■□□□□ 0
LITAF-217ENST00000575426 HEATR9A2RTY3 570 aa15.07■□□□□ 0
LITAF-217ENST00000575426 TRIM38O00635 465 aa15.07■□□□□ 0
LITAF-217ENST00000575426 YY2O15391 372 aa15.07■□□□□ 0
LITAF-217ENST00000575426 LDB2O43679 373 aa15.07■□□□□ 0
LITAF-217ENST00000575426 TPSB2P20231 275 aa15.07■□□□□ 0
LITAF-217ENST00000575426 ADRA1DP25100 572 aa15.07■□□□□ 0
LITAF-217ENST00000575426 GRIA1P42261 906 aa15.07■□□□□ 0
LITAF-217ENST00000575426 NPY2RP49146 381 aa15.07■□□□□ 0
LITAF-217ENST00000575426 GTF2H3Q13889 308 aa15.07■□□□□ 0
LITAF-217ENST00000575426 TPSAB1Q15661 275 aa15.07■□□□□ 0
LITAF-217ENST00000575426 LDLRAP1Q5SW96 308 aa15.07■□□□□ 0
LITAF-217ENST00000575426 CERCAMQ5T4B2 595 aa15.07■□□□□ 0
LITAF-217ENST00000575426 ZCCHC8Q6NZY4 707 aaKnown RBP15.07■□□□□ 0
LITAF-217ENST00000575426 NYAP1Q6ZVC0 841 aa15.07■□□□□ 0
LITAF-217ENST00000575426 KLHL7Q8IXQ5 586 aa15.07■□□□□ 0
LITAF-217ENST00000575426 OR2M4Q96R27 311 aa15.07■□□□□ 0
LITAF-217ENST00000575426 OR2AG1Q9H205 316 aa15.07■□□□□ 0
LITAF-217ENST00000575426 ASB8Q9H765 288 aa15.07■□□□□ 0
LITAF-217ENST00000575426 ARFGAP3Q9NP61 516 aa15.07■□□□□ 0
LITAF-217ENST00000575426 NLE1Q9NVX2 485 aaPredicted RBP15.07■□□□□ 0
LITAF-217ENST00000575426 TRNAU1APQ9NX07 287 aaKnown RBP15.07■□□□□ 0
LITAF-217ENST00000575426 NCKIPSDQ9NZQ3 722 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms