RNA–Protein interactions for RNA: ENST00000571976.1

LITAF-210, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-210ENST00000571976 GKN2Q86XP6 184 aa16.05■□□□□ 0.16
LITAF-210ENST00000571976 DNAAF3Q8N9W5 541 aa16.05■□□□□ 0.16
LITAF-210ENST00000571976 FAM181AQ8N9Y4 354 aa16.05■□□□□ 0.16
LITAF-210ENST00000571976 OR4K2Q8NGD2 314 aa16.05■□□□□ 0.16
LITAF-210ENST00000571976 OR52K1Q8NGK4 314 aa16.05■□□□□ 0.16
LITAF-210ENST00000571976 SCG3Q8WXD2 468 aaKnown RBP16.05■□□□□ 0.16
LITAF-210ENST00000571976 GLYATL1Q969I3 302 aa16.05■□□□□ 0.16
LITAF-210ENST00000571976 VPS35Q96QK1 796 aa16.05■□□□□ 0.16
LITAF-210ENST00000571976 EIF2B3Q9NR50 452 aaKnown RBP16.05■□□□□ 0.16
LITAF-210ENST00000571976 TRNAU1APQ9NX07 287 aaKnown RBP16.05■□□□□ 0.16
LITAF-210ENST00000571976 SUFUQ9UMX1 484 aa16.05■□□□□ 0.16
LITAF-210ENST00000571976 DOLKQ9UPQ8 538 aa16.05■□□□□ 0.16
LITAF-210ENST00000571976 APOBEC2Q9Y235 224 aaKnown RBP16.05■□□□□ 0.16
LITAF-210ENST00000571976 CACNA1AO00555 2505 aa16.04■□□□□ 0.16
LITAF-210ENST00000571976 GLYATL1P3A0A0U1RQE8 302 aa16.04■□□□□ 0.16
LITAF-210ENST00000571976 LDB2O43679 373 aa16.04■□□□□ 0.16
LITAF-210ENST00000571976 SLC25A14O95258 325 aaPredicted RBP16.04■□□□□ 0.16
LITAF-210ENST00000571976 CKMT2P17540 419 aa16.04■□□□□ 0.16
LITAF-210ENST00000571976 TPH1P17752 444 aa16.04■□□□□ 0.16
LITAF-210ENST00000571976 HADHAP40939 763 aa16.04■□□□□ 0.16
LITAF-210ENST00000571976 GNPDA1P46926 289 aa16.04■□□□□ 0.16
LITAF-210ENST00000571976 FNTAP49354 379 aa16.04■□□□□ 0.16
LITAF-210ENST00000571976 ETF1P62495 437 aaKnown RBP16.04■□□□□ 0.16
LITAF-210ENST00000571976 BASP1P80723 227 aaKnown RBP16.04■□□□□ 0.16
LITAF-210ENST00000571976 ITGA9Q13797 1035 aa16.04■□□□□ 0.16
LITAF-210ENST00000571976 ATP13A5Q4VNC0 1218 aa16.04■□□□□ 0.16
LITAF-210ENST00000571976 CREG2Q8IUH2 290 aa16.04■□□□□ 0.16
LITAF-210ENST00000571976 PHYKPLQ8IUZ5 450 aa16.04■□□□□ 0.16
LITAF-210ENST00000571976 GRK7Q8WTQ7 553 aa16.04■□□□□ 0.16
LITAF-210ENST00000571976 TMEM168Q9H0V1 697 aa16.04■□□□□ 0.16
LITAF-210ENST00000571976 RMI1Q9H9A7 625 aa16.04■□□□□ 0.16
LITAF-210ENST00000571976 TRIM39Q9HCM9 518 aa16.04■□□□□ 0.16
LITAF-210ENST00000571976 EVA1BQ9NVM1 165 aa16.04■□□□□ 0.16
LITAF-210ENST00000571976 NCKIPSDQ9NZQ3 722 aa16.04■□□□□ 0.16
LITAF-210ENST00000571976 RNF14Q9UBS8 474 aa16.04■□□□□ 0.16
LITAF-210ENST00000571976 APPL1Q9UKG1 709 aa16.04■□□□□ 0.16
LITAF-210ENST00000571976 OAS3Q9Y6K5 1087 aaKnown RBP16.04■□□□□ 0.16
LITAF-210ENST00000571976 LRP4O75096 1905 aa16.04■□□□□ 0.16
LITAF-210ENST00000571976 ARID1BQ8NFD5 2236 aaPredicted RBP16.03■□□□□ 0.16
LITAF-210ENST00000571976 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.03■□□□□ 0.16
LITAF-210ENST00000571976 AP3B1O00203 1094 aa16.03■□□□□ 0.16
LITAF-210ENST00000571976 TRIM16O95361 564 aa16.03■□□□□ 0.16
LITAF-210ENST00000571976 KRT14P02533 472 aa16.03■□□□□ 0.16
LITAF-210ENST00000571976 CELA2BP08218 269 aaPredicted RBP16.03■□□□□ 0.16
LITAF-210ENST00000571976 CASQ1P31415 396 aa16.03■□□□□ 0.16
LITAF-210ENST00000571976 PAFAH1B1P43034 410 aa16.03■□□□□ 0.16
LITAF-210ENST00000571976 ZNF140P52738 457 aaPredicted RBP16.03■□□□□ 0.16
LITAF-210ENST00000571976 CDK16Q00536 496 aa16.03■□□□□ 0.16
LITAF-210ENST00000571976 LAMB3Q13751 1172 aa16.03■□□□□ 0.16
LITAF-210ENST00000571976 PTPRCAPQ14761 206 aa16.03■□□□□ 0.16
LITAF-210ENST00000571976 POU6F1Q14863 301 aa16.03■□□□□ 0.16
LITAF-210ENST00000571976 TRIP13Q15645 432 aaPredicted RBP16.03■□□□□ 0.16
LITAF-210ENST00000571976 CHRNA6Q15825 494 aa16.03■□□□□ 0.16
LITAF-210ENST00000571976 C6orf132Q5T0Z8 1188 aa16.03■□□□□ 0.16
LITAF-210ENST00000571976 FAM151BQ6UXP7 276 aa16.03■□□□□ 0.16
LITAF-210ENST00000571976 MARK2Q7KZI7 788 aaKnown RBP16.03■□□□□ 0.16
LITAF-210ENST00000571976 TAF8Q7Z7C8 310 aa16.03■□□□□ 0.16
LITAF-210ENST00000571976 GPBAR1Q8TDU6 330 aa16.03■□□□□ 0.16
LITAF-210ENST00000571976 PTCD2Q8WV60 388 aaKnown RBP16.03■□□□□ 0.16
LITAF-210ENST00000571976 GLMNQ92990 594 aa16.03■□□□□ 0.16
LITAF-210ENST00000571976 CAPZA3Q96KX2 299 aa16.03■□□□□ 0.16
LITAF-210ENST00000571976 APOLD1Q96LR9 279 aa16.03■□□□□ 0.16
LITAF-210ENST00000571976 SUDS3Q9H7L9 328 aaPredicted RBP16.03■□□□□ 0.16
LITAF-210ENST00000571976 CASS4Q9NQ75 786 aa16.03■□□□□ 0.16
LITAF-210ENST00000571976 PIH1D1Q9NWS0 290 aaKnown RBP16.03■□□□□ 0.16
LITAF-210ENST00000571976 TOR4AQ9NXH8 423 aa16.03■□□□□ 0.16
LITAF-210ENST00000571976 GPSM3Q9Y4H4 160 aa16.03■□□□□ 0.16
LITAF-210ENST00000571976 KCTD3Q9Y597 815 aa16.03■□□□□ 0.16
LITAF-210ENST00000571976 SCN8AQ9UQD0 1980 aa16.03■□□□□ 0.16
LITAF-210ENST00000571976 GPR89AB7ZAQ6 455 aa16.02■□□□□ 0.16
LITAF-210ENST00000571976 FANCGO15287 622 aa16.02■□□□□ 0.16
LITAF-210ENST00000571976 VEGFDO43915 354 aa16.02■□□□□ 0.16
LITAF-210ENST00000571976 DNAJC6O75061 913 aa16.02■□□□□ 0.16
LITAF-210ENST00000571976 ADRB1P08588 477 aa16.02■□□□□ 0.16
LITAF-210ENST00000571976 FTH1P19P0C7X4 201 aa16.02■□□□□ 0.16
LITAF-210ENST00000571976 GPR89BP0CG08 455 aa16.02■□□□□ 0.16
LITAF-210ENST00000571976 CKMT1AP12532 417 aa16.02■□□□□ 0.16
LITAF-210ENST00000571976 ACP1P24666 158 aa16.02■□□□□ 0.16
LITAF-210ENST00000571976 ADCY8P40145 1251 aa16.02■□□□□ 0.16
LITAF-210ENST00000571976 GRIA1P42261 906 aa16.02■□□□□ 0.16
LITAF-210ENST00000571976 RPIAP49247 311 aa16.02■□□□□ 0.16
LITAF-210ENST00000571976 DUSP3P51452 185 aaPredicted RBP16.02■□□□□ 0.16
LITAF-210ENST00000571976 DAB2P98082 770 aa16.02■□□□□ 0.16
LITAF-210ENST00000571976 FOXK2Q01167 660 aa16.02■□□□□ 0.16
LITAF-210ENST00000571976 ILF3Q12906 894 aaKnown RBP eCLIP16.02■□□□□ 0.16
LITAF-210ENST00000571976 GPS1Q13098 491 aa16.02■□□□□ 0.16
LITAF-210ENST00000571976 DNAJC3Q13217 504 aa16.02■□□□□ 0.16
LITAF-210ENST00000571976 LRP8Q14114 963 aa16.02■□□□□ 0.16
LITAF-210ENST00000571976 TCEA2Q15560 299 aa16.02■□□□□ 0.16
LITAF-210ENST00000571976 PYCR3Q53H96 274 aa16.02■□□□□ 0.16
LITAF-210ENST00000571976 SLCO6A1Q86UG4 719 aa16.02■□□□□ 0.16
LITAF-210ENST00000571976 GALNT13Q8IUC8 556 aa16.02■□□□□ 0.16
LITAF-210ENST00000571976 OR13C4Q8NGS5 318 aa16.02■□□□□ 0.16
LITAF-210ENST00000571976 ZNF398Q8TD17 642 aa16.02■□□□□ 0.16
LITAF-210ENST00000571976 STYXQ8WUJ0 223 aa16.02■□□□□ 0.16
LITAF-210ENST00000571976 OR2M4Q96R27 311 aa16.02■□□□□ 0.16
LITAF-210ENST00000571976 BOCQ9BWV1 1114 aa16.02■□□□□ 0.16
LITAF-210ENST00000571976 GSDMCQ9BYG8 508 aa16.02■□□□□ 0.16
LITAF-210ENST00000571976 ATXN10Q9UBB4 475 aa16.02■□□□□ 0.16
LITAF-210ENST00000571976 NEU2Q9Y3R4 380 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms