RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 AP1G1O43747 822 aa13.28□□□□□ -0.28
CCDC40-205ENST00000571028 PHF2O75151 1096 aa13.28□□□□□ -0.28
CCDC40-205ENST00000571028 TCEA3O75764 348 aa13.28□□□□□ -0.28
CCDC40-205ENST00000571028 PAK4O96013 591 aaPredicted RBP13.28□□□□□ -0.28
CCDC40-205ENST00000571028 KRT14P02533 472 aa13.28□□□□□ -0.28
CCDC40-205ENST00000571028 ITGB2P05107 769 aa13.28□□□□□ -0.28
CCDC40-205ENST00000571028 ELFN1P0C7U0 828 aa13.28□□□□□ -0.28
CCDC40-205ENST00000571028 VIPR1P32241 457 aa13.28□□□□□ -0.28
CCDC40-205ENST00000571028 MMP12P39900 470 aa13.28□□□□□ -0.28
CCDC40-205ENST00000571028 LIG3P49916 1009 aa13.28□□□□□ -0.28
CCDC40-205ENST00000571028 SUOXP51687 545 aa13.28□□□□□ -0.28
CCDC40-205ENST00000571028 RPS21P63220 83 aaKnown RBP13.28□□□□□ -0.28
CCDC40-205ENST00000571028 MPP3Q13368 585 aa13.28□□□□□ -0.28
CCDC40-205ENST00000571028 ARHGEF7Q14155 803 aa13.28□□□□□ -0.28
CCDC40-205ENST00000571028 ACOX1Q15067 660 aa13.28□□□□□ -0.28
CCDC40-205ENST00000571028 QPCTQ16769 361 aa13.28□□□□□ -0.28
CCDC40-205ENST00000571028 ZNF284Q2VY69 593 aa13.28□□□□□ -0.28
CCDC40-205ENST00000571028 TMEM52BQ4KMG9 183 aa13.28□□□□□ -0.28
CCDC40-205ENST00000571028 DRICH1Q6PGQ1 229 aaPredicted RBP13.28□□□□□ -0.28
CCDC40-205ENST00000571028 PTAR1Q7Z6K3 402 aaPredicted RBP13.28□□□□□ -0.28
CCDC40-205ENST00000571028 TSPAN33Q86UF1 283 aa13.28□□□□□ -0.28
CCDC40-205ENST00000571028 JAMLQ86YT9 394 aa13.28□□□□□ -0.28
CCDC40-205ENST00000571028 TMEM145Q8NBT3 493 aa13.28□□□□□ -0.28
CCDC40-205ENST00000571028 OR13H1Q8NG92 308 aa13.28□□□□□ -0.28
CCDC40-205ENST00000571028 ATL2Q8NHH9 583 aa13.28□□□□□ -0.28
CCDC40-205ENST00000571028 EXTL1Q92935 676 aa13.28□□□□□ -0.28
CCDC40-205ENST00000571028 SGF29Q96ES7 293 aa13.28□□□□□ -0.28
CCDC40-205ENST00000571028 MRGPRX2Q96LB1 330 aa13.28□□□□□ -0.28
CCDC40-205ENST00000571028 ETNK1Q9HBU6 452 aa13.28□□□□□ -0.28
CCDC40-205ENST00000571028 RAB6BQ9NRW1 208 aa13.28□□□□□ -0.28
CCDC40-205ENST00000571028 ENTPD2Q9Y5L3 495 aa13.28□□□□□ -0.28
CCDC40-205ENST00000571028 SUV39H1O43463 412 aa13.27□□□□□ -0.29
CCDC40-205ENST00000571028 TM7SF2O76062 418 aa13.27□□□□□ -0.29
CCDC40-205ENST00000571028 NDST3O95803 873 aa13.27□□□□□ -0.29
CCDC40-205ENST00000571028 ITGA2BP08514 1039 aa13.27□□□□□ -0.29
CCDC40-205ENST00000571028 GP1BBP13224 206 aa13.27□□□□□ -0.29
CCDC40-205ENST00000571028 HNRNPA2B1P22626 353 aaKnown RBP13.27□□□□□ -0.29
CCDC40-205ENST00000571028 NFKBIAP25963 317 aa13.27□□□□□ -0.29
CCDC40-205ENST00000571028 DEKP35659 375 aaKnown RBP13.27□□□□□ -0.29
CCDC40-205ENST00000571028 BASP1P80723 227 aaKnown RBP13.27□□□□□ -0.29
CCDC40-205ENST00000571028 C2orf54Q08AI8 447 aa13.27□□□□□ -0.29
CCDC40-205ENST00000571028 RALGDSQ12967 914 aa13.27□□□□□ -0.29
CCDC40-205ENST00000571028 FGL2Q14314 439 aa13.27□□□□□ -0.29
CCDC40-205ENST00000571028 ZNF542PQ5EBM4 170 aa13.27□□□□□ -0.29
CCDC40-205ENST00000571028 KIAA1161Q6NSJ0 714 aa13.27□□□□□ -0.29
CCDC40-205ENST00000571028 NEK5Q6P3R8 708 aa13.27□□□□□ -0.29
CCDC40-205ENST00000571028 GUSBP11Q6P575 273 aa13.27□□□□□ -0.29
CCDC40-205ENST00000571028 CRTC1Q6UUV9 634 aa13.27□□□□□ -0.29
CCDC40-205ENST00000571028 DPPA4Q7L190 304 aa13.27□□□□□ -0.29
CCDC40-205ENST00000571028 CLEC14AQ86T13 490 aa13.27□□□□□ -0.29
CCDC40-205ENST00000571028 TADA1Q96BN2 335 aa13.27□□□□□ -0.29
CCDC40-205ENST00000571028 RTP4Q96DX8 246 aa13.27□□□□□ -0.29
CCDC40-205ENST00000571028 SCRN2Q96FV2 425 aa13.27□□□□□ -0.29
CCDC40-205ENST00000571028 SLC17A9Q9BYT1 436 aa13.27□□□□□ -0.29
CCDC40-205ENST00000571028 PAK5Q9P286 719 aa13.27□□□□□ -0.29
CCDC40-205ENST00000571028 SHOC2Q9UQ13 582 aa13.27□□□□□ -0.29
CCDC40-205ENST00000571028 AAR2Q9Y312 384 aaKnown RBP13.27□□□□□ -0.29
CCDC40-205ENST00000571028 COL12A1Q99715 3063 aa13.27□□□□□ -0.29
CCDC40-205ENST00000571028 CCDC187A0A096LP49 1063 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 LY6G6EA0A0G2JKS1 128 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 A0A0J9YYE9 177 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 A0A1W2PNU3 283 aaPredicted RBP13.26□□□□□ -0.29
CCDC40-205ENST00000571028 GOLGA6CA6NDK9 693 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 GOLGA6BA6NDN3 693 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 A6NNZ2 444 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 ANKRD66B4E2M5 251 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 RAD51BO15315 384 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 PPFIA2O75334 1257 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 CLDN7O95471 211 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 TRBC1P01850 177 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 FAM87AP0C7U9 286 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 GOLGA6DP0CG33 693 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 GIMD1P0DJR0 217 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 LHCGRP22888 699 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 FDFT1P37268 417 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 RPIAP49247 311 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 CLDN2P57739 230 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 RPL26P61254 145 aaKnown RBP13.26□□□□□ -0.29
CCDC40-205ENST00000571028 MRPS25P82663 173 aaKnown RBP13.26□□□□□ -0.29
CCDC40-205ENST00000571028 TLE1Q04724 770 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 SPIDRQ14159 915 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 PPP1R7Q15435 360 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 NR0B2Q15466 257 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 CNGA3Q16281 694 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 CYP1B1Q16678 543 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 LINC00303Q3SY05 128 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 SIRPB2Q5JXA9 342 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 LIPIQ6XZB0 460 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 DCP2Q8IU60 420 aaKnown RBP13.26□□□□□ -0.29
CCDC40-205ENST00000571028 ZSCAN1Q8NBB4 408 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 ZNF548Q8NEK5 533 aaPredicted RBP13.26□□□□□ -0.29
CCDC40-205ENST00000571028 WDR48Q8TAF3 677 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 FAM174AQ8TBP5 190 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 BLOC1S5Q8TDH9 187 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 GLMNQ92990 594 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 LRRC45Q96CN5 670 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 TRIB3Q96RU7 358 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 TBL1YQ9BQ87 522 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 PIH1D1Q9NWS0 290 aaKnown RBP13.26□□□□□ -0.29
CCDC40-205ENST00000571028 GOLGA6AQ9NYA3 693 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms