RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 AMPD1P23109 780 aa18.82■□□□□ 0.6
SCARF1-204ENST00000570902 PCK1P35558 622 aa18.82■□□□□ 0.6
SCARF1-204ENST00000570902 MAPK9P45984 424 aa18.82■□□□□ 0.6
SCARF1-204ENST00000570902 EPHB1P54762 984 aa18.82■□□□□ 0.6
SCARF1-204ENST00000570902 BOLA3Q53S33 107 aa18.82■□□□□ 0.6
SCARF1-204ENST00000570902 CHST15Q7LFX5 561 aaPredicted RBP18.82■□□□□ 0.6
SCARF1-204ENST00000570902 IRF2BP2Q7Z5L9 587 aa18.82■□□□□ 0.6
SCARF1-204ENST00000570902 POLNQ7Z5Q5 900 aa18.82■□□□□ 0.6
SCARF1-204ENST00000570902 PLXDC1Q8IUK5 500 aa18.82■□□□□ 0.6
SCARF1-204ENST00000570902 MIB2Q96AX9 1013 aa18.82■□□□□ 0.6
SCARF1-204ENST00000570902 PSMG3-AS1Q96PY0 264 aa18.82■□□□□ 0.6
SCARF1-204ENST00000570902 SYT11Q9BT88 431 aa18.82■□□□□ 0.6
SCARF1-204ENST00000570902 RMI1Q9H9A7 625 aa18.82■□□□□ 0.6
SCARF1-204ENST00000570902 CNOT8Q9UFF9 292 aaKnown RBP18.82■□□□□ 0.6
SCARF1-204ENST00000570902 TBC1D29Q9UFV1 150 aa18.82■□□□□ 0.6
SCARF1-204ENST00000570902 MYO6Q9UM54 1294 aa18.82■□□□□ 0.6
SCARF1-204ENST00000570902 RPS6KL1Q9Y6S9 549 aa18.82■□□□□ 0.6
SCARF1-204ENST00000570902 SCINQ9Y6U3 715 aa18.82■□□□□ 0.6
SCARF1-204ENST00000570902 KIR2DS5A0A0G2JLQ3 304 aa18.81■□□□□ 0.6
SCARF1-204ENST00000570902 A0A0G2JNG1 304 aa18.81■□□□□ 0.6
SCARF1-204ENST00000570902 A0A0J9YYE9 177 aa18.81■□□□□ 0.6
SCARF1-204ENST00000570902 A0A0U1RQS6 177 aa18.81■□□□□ 0.6
SCARF1-204ENST00000570902 OR5K4A6NMS3 321 aa18.81■□□□□ 0.6
SCARF1-204ENST00000570902 KIR2DS3K7RE56 304 aa18.81■□□□□ 0.6
SCARF1-204ENST00000570902 DNAJC6O75061 913 aa18.81■□□□□ 0.6
SCARF1-204ENST00000570902 TRBC1P01850 177 aa18.81■□□□□ 0.6
SCARF1-204ENST00000570902 PDHA1P08559 390 aa18.81■□□□□ 0.6
SCARF1-204ENST00000570902 ANKRD34CP0C6C1 535 aa18.81■□□□□ 0.6
SCARF1-204ENST00000570902 CD97P48960 835 aa18.81■□□□□ 0.6
SCARF1-204ENST00000570902 STC1P52823 247 aa18.81■□□□□ 0.6
SCARF1-204ENST00000570902 KIR2DS5Q14953 304 aa18.81■□□□□ 0.6
SCARF1-204ENST00000570902 LRRC49Q8IUZ0 686 aa18.81■□□□□ 0.6
SCARF1-204ENST00000570902 CSPG4P5Q96PW8 444 aa18.81■□□□□ 0.6
SCARF1-204ENST00000570902 AGAP2Q99490 1192 aa18.81■□□□□ 0.6
SCARF1-204ENST00000570902 RIOK2Q9BVS4 552 aaKnown RBP18.81■□□□□ 0.6
SCARF1-204ENST00000570902 TRIM7Q9C029 511 aa18.81■□□□□ 0.6
SCARF1-204ENST00000570902 POLR1EQ9GZS1 481 aaKnown RBP18.81■□□□□ 0.6
SCARF1-204ENST00000570902 NT5MQ9NPB1 228 aa18.81■□□□□ 0.6
SCARF1-204ENST00000570902 ETNK2Q9NVF9 386 aa18.81■□□□□ 0.6
SCARF1-204ENST00000570902 KLHL3Q9UH77 587 aa18.81■□□□□ 0.6
SCARF1-204ENST00000570902 TP53TG5Q9Y2B4 290 aa18.81■□□□□ 0.6
SCARF1-204ENST00000570902 KCNMB2Q9Y691 235 aa18.81■□□□□ 0.6
SCARF1-204ENST00000570902 SPENQ96T58 3664 aaKnown RBP18.8■□□□□ 0.6
SCARF1-204ENST00000570902 LRRC10BA6NIK2 292 aa18.8■□□□□ 0.6
SCARF1-204ENST00000570902 MKRN2OSH3BPM6 223 aa18.8■□□□□ 0.6
SCARF1-204ENST00000570902 F3P13726 295 aa18.8■□□□□ 0.6
SCARF1-204ENST00000570902 CDK11BP21127 795 aaKnown RBP18.8■□□□□ 0.6
SCARF1-204ENST00000570902 MYL5Q02045 173 aa18.8■□□□□ 0.6
SCARF1-204ENST00000570902 TYRO3Q06418 890 aa18.8■□□□□ 0.6
SCARF1-204ENST00000570902 ITKQ08881 620 aa18.8■□□□□ 0.6
SCARF1-204ENST00000570902 SMTNL2Q2TAL5 461 aa18.8■□□□□ 0.6
SCARF1-204ENST00000570902 ATP1A1-AS1Q5TC04 95 aa18.8■□□□□ 0.6
SCARF1-204ENST00000570902 CAVIN1Q6NZI2 390 aaKnown RBP18.8■□□□□ 0.6
SCARF1-204ENST00000570902 LYSMD3Q7Z3D4 306 aa18.8■□□□□ 0.6
SCARF1-204ENST00000570902 TEX26Q8N6G2 289 aa18.8■□□□□ 0.6
SCARF1-204ENST00000570902 TEX19Q8NA77 164 aa18.8■□□□□ 0.6
SCARF1-204ENST00000570902 ULBP3Q9BZM4 244 aa18.8■□□□□ 0.6
SCARF1-204ENST00000570902 MRPL47Q9HD33 250 aaKnown RBP18.8■□□□□ 0.6
SCARF1-204ENST00000570902 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.8■□□□□ 0.6
SCARF1-204ENST00000570902 HAUS2Q9NVX0 235 aa18.8■□□□□ 0.6
SCARF1-204ENST00000570902 KCNK6Q9Y257 313 aa18.8■□□□□ 0.6
SCARF1-204ENST00000570902 MN1Q10571 1320 aaPredicted RBP18.79■□□□□ 0.6
SCARF1-204ENST00000570902 A6NCN8 305 aa18.79■□□□□ 0.6
SCARF1-204ENST00000570902 SNX2O60749 519 aa18.79■□□□□ 0.6
SCARF1-204ENST00000570902 FTLP02792 175 aaPredicted RBP18.79■□□□□ 0.6
SCARF1-204ENST00000570902 ATP1A1P05023 1023 aaKnown RBP18.79■□□□□ 0.6
SCARF1-204ENST00000570902 GZMAP12544 262 aa18.79■□□□□ 0.6
SCARF1-204ENST00000570902 CA4P22748 312 aa18.79■□□□□ 0.6
SCARF1-204ENST00000570902 CES1P23141 567 aa18.79■□□□□ 0.6
SCARF1-204ENST00000570902 C4orf17Q53FE4 359 aa18.79■□□□□ 0.6
SCARF1-204ENST00000570902 TCTN3Q6NUS6 607 aa18.79■□□□□ 0.6
SCARF1-204ENST00000570902 C6orf15Q6UXA7 325 aaPredicted RBP18.79■□□□□ 0.6
SCARF1-204ENST00000570902 HSPH1Q92598 858 aa18.79■□□□□ 0.6
SCARF1-204ENST00000570902 TRIM11Q96F44 468 aa18.79■□□□□ 0.6
SCARF1-204ENST00000570902 LRRC4CQ9HCJ2 640 aa18.79■□□□□ 0.6
SCARF1-204ENST00000570902 SIDT1Q9NXL6 827 aaKnown RBP18.79■□□□□ 0.6
SCARF1-204ENST00000570902 CPNE7Q9UBL6 633 aa18.79■□□□□ 0.6
SCARF1-204ENST00000570902 PRKAB1Q9Y478 270 aa18.79■□□□□ 0.6
SCARF1-204ENST00000570902 NBASA2RRP1 2371 aa18.78■□□□□ 0.6
SCARF1-204ENST00000570902 BLACEA4D250 179 aa18.78■□□□□ 0.6
SCARF1-204ENST00000570902 LILRA5A6NI73 299 aa18.78■□□□□ 0.6
SCARF1-204ENST00000570902 MTSS1O43312 755 aa18.78■□□□□ 0.6
SCARF1-204ENST00000570902 ACP5P13686 325 aa18.78■□□□□ 0.6
SCARF1-204ENST00000570902 IL1R2P27930 398 aa18.78■□□□□ 0.6
SCARF1-204ENST00000570902 DLSTP36957 453 aa18.78■□□□□ 0.6
SCARF1-204ENST00000570902 FOXM1Q08050 763 aa18.78■□□□□ 0.6
SCARF1-204ENST00000570902 PHYKPLQ8IUZ5 450 aa18.78■□□□□ 0.6
SCARF1-204ENST00000570902 CCDC13Q8IYE1 715 aa18.78■□□□□ 0.6
SCARF1-204ENST00000570902 ZNF653Q96CK0 615 aa18.78■□□□□ 0.6
SCARF1-204ENST00000570902 SMIM14Q96QK8 99 aa18.78■□□□□ 0.6
SCARF1-204ENST00000570902 TBC1D10AQ9BXI6 508 aa18.78■□□□□ 0.6
SCARF1-204ENST00000570902 UCK1Q9HA47 277 aa18.78■□□□□ 0.6
SCARF1-204ENST00000570902 CNOT6Q9ULM6 557 aaKnown RBP18.78■□□□□ 0.6
SCARF1-204ENST00000570902 POLHQ9Y253 713 aa18.78■□□□□ 0.6
SCARF1-204ENST00000570902 PCYT1BQ9Y5K3 369 aaPredicted RBP18.78■□□□□ 0.6
SCARF1-204ENST00000570902 MRPS18BQ9Y676 258 aaKnown RBP18.78■□□□□ 0.6
SCARF1-204ENST00000570902 OAS3Q9Y6K5 1087 aaKnown RBP18.78■□□□□ 0.6
SCARF1-204ENST00000570902 NBPF19A0A087WUL8 3843 aa18.78■□□□□ 0.6
SCARF1-204ENST00000570902 USP9YO00507 2555 aaPredicted RBP18.78■□□□□ 0.6
SCARF1-204ENST00000570902 TOX3O15405 576 aaPredicted RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms