RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 PYCR3Q53H96 274 aa13.31□□□□□ -0.28
RPAIN-207ENST00000570883 CDCP2Q5VXM1 449 aa13.31□□□□□ -0.28
RPAIN-207ENST00000570883 RANBP10Q6VN20 620 aa13.31□□□□□ -0.28
RPAIN-207ENST00000570883 MARK2Q7KZI7 788 aaKnown RBP13.31□□□□□ -0.28
RPAIN-207ENST00000570883 EFL1Q7Z2Z2 1120 aaKnown RBP13.31□□□□□ -0.28
RPAIN-207ENST00000570883 TAF8Q7Z7C8 310 aa13.31□□□□□ -0.28
RPAIN-207ENST00000570883 TRIM58Q8NG06 486 aa13.31□□□□□ -0.28
RPAIN-207ENST00000570883 BLOC1S5Q8TDH9 187 aa13.31□□□□□ -0.28
RPAIN-207ENST00000570883 UBE2Q2Q8WVN8 375 aa13.31□□□□□ -0.28
RPAIN-207ENST00000570883 RTP4Q96DX8 246 aa13.31□□□□□ -0.28
RPAIN-207ENST00000570883 SPATA16Q9BXB7 569 aa13.31□□□□□ -0.28
RPAIN-207ENST00000570883 CDH19Q9H159 772 aa13.31□□□□□ -0.28
RPAIN-207ENST00000570883 BPIFA1Q9NP55 256 aa13.31□□□□□ -0.28
RPAIN-207ENST00000570883 TRNAU1APQ9NX07 287 aaKnown RBP13.31□□□□□ -0.28
RPAIN-207ENST00000570883 VPS18Q9P253 973 aa13.31□□□□□ -0.28
RPAIN-207ENST00000570883 RABGEF1Q9UJ41 708 aa13.31□□□□□ -0.28
RPAIN-207ENST00000570883 PADI4Q9UM07 663 aa13.31□□□□□ -0.28
RPAIN-207ENST00000570883 PLEKHM1Q9Y4G2 1056 aa13.31□□□□□ -0.28
RPAIN-207ENST00000570883 GAPDHSO14556 408 aaPredicted RBP13.3□□□□□ -0.28
RPAIN-207ENST00000570883 BUD23O43709 281 aaKnown RBP13.3□□□□□ -0.28
RPAIN-207ENST00000570883 DNAJC6O75061 913 aa13.3□□□□□ -0.28
RPAIN-207ENST00000570883 USP12O75317 370 aa13.3□□□□□ -0.28
RPAIN-207ENST00000570883 ZNF189O75820 626 aaPredicted RBP13.3□□□□□ -0.28
RPAIN-207ENST00000570883 METTL18O95568 372 aa13.3□□□□□ -0.28
RPAIN-207ENST00000570883 CAPNS1P04632 268 aa13.3□□□□□ -0.28
RPAIN-207ENST00000570883 PROS1P07225 676 aa13.3□□□□□ -0.28
RPAIN-207ENST00000570883 CTBSQ01459 385 aa13.3□□□□□ -0.28
RPAIN-207ENST00000570883 MSLNQ13421 630 aaPredicted RBP13.3□□□□□ -0.28
RPAIN-207ENST00000570883 SPARCL1Q14515 664 aa13.3□□□□□ -0.28
RPAIN-207ENST00000570883 ZNF569Q5MCW4 686 aa13.3□□□□□ -0.28
RPAIN-207ENST00000570883 ZNF648Q5T619 568 aaPredicted RBP13.3□□□□□ -0.28
RPAIN-207ENST00000570883 KCTD11Q693B1 232 aa13.3□□□□□ -0.28
RPAIN-207ENST00000570883 DENND5AQ6IQ26 1287 aa13.3□□□□□ -0.28
RPAIN-207ENST00000570883 GLT6D1Q7Z4J2 308 aa13.3□□□□□ -0.28
RPAIN-207ENST00000570883 TRAM1L1Q8N609 369 aa13.3□□□□□ -0.28
RPAIN-207ENST00000570883 DCBLD1Q8N8Z6 715 aa13.3□□□□□ -0.28
RPAIN-207ENST00000570883 FAM46DQ8NEK8 389 aa13.3□□□□□ -0.28
RPAIN-207ENST00000570883 GPR156Q8NFN8 814 aa13.3□□□□□ -0.28
RPAIN-207ENST00000570883 C1orf54Q8WWF1 131 aa13.3□□□□□ -0.28
RPAIN-207ENST00000570883 SCG3Q8WXD2 468 aaKnown RBP13.3□□□□□ -0.28
RPAIN-207ENST00000570883 PDLIM2Q96JY6 352 aa13.3□□□□□ -0.28
RPAIN-207ENST00000570883 PLEKHG4BQ96PX9 1271 aa13.3□□□□□ -0.28
RPAIN-207ENST00000570883 OR2M4Q96R27 311 aa13.3□□□□□ -0.28
RPAIN-207ENST00000570883 SRPK1Q96SB4 655 aaKnown RBP13.3□□□□□ -0.28
RPAIN-207ENST00000570883 ZSCAN5AQ9BUG6 496 aa13.3□□□□□ -0.28
RPAIN-207ENST00000570883 TRABDQ9H4I3 376 aa13.3□□□□□ -0.28
RPAIN-207ENST00000570883 ARFGAP3Q9NP61 516 aa13.3□□□□□ -0.28
RPAIN-207ENST00000570883 RAD18Q9NS91 495 aa13.3□□□□□ -0.28
RPAIN-207ENST00000570883 SPATS2LQ9NUQ6 558 aaKnown RBP13.3□□□□□ -0.28
RPAIN-207ENST00000570883 EVA1BQ9NVM1 165 aa13.3□□□□□ -0.28
RPAIN-207ENST00000570883 HACD3Q9P035 362 aa13.3□□□□□ -0.28
RPAIN-207ENST00000570883 IL17CQ9P0M4 197 aa13.3□□□□□ -0.28
RPAIN-207ENST00000570883 GULP1Q9UBP9 304 aa13.3□□□□□ -0.28
RPAIN-207ENST00000570883 TMPRSS11EQ9UL52 423 aa13.3□□□□□ -0.28
RPAIN-207ENST00000570883 AAR2Q9Y312 384 aaKnown RBP13.3□□□□□ -0.28
RPAIN-207ENST00000570883 PRKAB1Q9Y478 270 aa13.3□□□□□ -0.28
RPAIN-207ENST00000570883 B4DGG1 531 aa13.29□□□□□ -0.28
RPAIN-207ENST00000570883 GPR39O43194 453 aa13.29□□□□□ -0.28
RPAIN-207ENST00000570883 CA5AP35218 305 aa13.29□□□□□ -0.28
RPAIN-207ENST00000570883 TNNT3P45378 269 aaPredicted RBP13.29□□□□□ -0.28
RPAIN-207ENST00000570883 RPIAP49247 311 aa13.29□□□□□ -0.28
RPAIN-207ENST00000570883 E2F1Q01094 437 aa13.29□□□□□ -0.28
RPAIN-207ENST00000570883 ILF3Q12906 894 aaKnown RBP eCLIP13.29□□□□□ -0.282e-6■■□□□ 12.4
RPAIN-207ENST00000570883 TARDBPQ13148 414 aaKnown RBP eCLIP13.29□□□□□ -0.28
RPAIN-207ENST00000570883 PRPSAP1Q14558 356 aa13.29□□□□□ -0.28
RPAIN-207ENST00000570883 PTPRCAPQ14761 206 aa13.29□□□□□ -0.28
RPAIN-207ENST00000570883 PARP6Q2NL67 630 aa13.29□□□□□ -0.28
RPAIN-207ENST00000570883 ATP13A5Q4VNC0 1218 aa13.29□□□□□ -0.28
RPAIN-207ENST00000570883 KHDC1Q4VXA5 237 aaKnown RBP13.29□□□□□ -0.28
RPAIN-207ENST00000570883 OGFOD3Q6PK18 319 aa13.29□□□□□ -0.28
RPAIN-207ENST00000570883 SLC30A9Q6PML9 568 aa13.29□□□□□ -0.28
RPAIN-207ENST00000570883 ARHGEF18Q6ZSZ5 1173 aa13.29□□□□□ -0.28
RPAIN-207ENST00000570883 TAB3Q8N5C8 712 aaPredicted RBP13.29□□□□□ -0.28
RPAIN-207ENST00000570883 GLMNQ92990 594 aa13.29□□□□□ -0.28
RPAIN-207ENST00000570883 NAT6Q93015 286 aa13.29□□□□□ -0.28
RPAIN-207ENST00000570883 CCDC74AQ96AQ1 378 aa13.29□□□□□ -0.28
RPAIN-207ENST00000570883 TBL1YQ9BQ87 522 aa13.29□□□□□ -0.28
RPAIN-207ENST00000570883 GSDMCQ9BYG8 508 aa13.29□□□□□ -0.28
RPAIN-207ENST00000570883 IL26Q9NPH9 171 aa13.29□□□□□ -0.28
RPAIN-207ENST00000570883 TAAR2Q9P1P5 351 aa13.29□□□□□ -0.28
RPAIN-207ENST00000570883 ATXN10Q9UBB4 475 aa13.29□□□□□ -0.28
RPAIN-207ENST00000570883 CLCA2Q9UQC9 943 aa13.29□□□□□ -0.28
RPAIN-207ENST00000570883 CFAP47Q6ZTR5 3102 aa13.29□□□□□ -0.28
RPAIN-207ENST00000570883 ASMTLO95671 621 aa13.28□□□□□ -0.28
RPAIN-207ENST00000570883 MT-CO3P00414 261 aa13.28□□□□□ -0.28
RPAIN-207ENST00000570883 JUPP14923 745 aa13.28□□□□□ -0.28
RPAIN-207ENST00000570883 ZNF8P17098 575 aaPredicted RBP13.28□□□□□ -0.28
RPAIN-207ENST00000570883 CXCR5P32302 372 aa13.28□□□□□ -0.28
RPAIN-207ENST00000570883 MAZP56270 477 aaKnown RBP13.28□□□□□ -0.28
RPAIN-207ENST00000570883 SNX1Q13596 522 aa13.28□□□□□ -0.28
RPAIN-207ENST00000570883 HLTFQ14527 1009 aaKnown RBP eCLIP13.28□□□□□ -0.28
RPAIN-207ENST00000570883 C14orf28Q4W4Y0 310 aa13.28□□□□□ -0.28
RPAIN-207ENST00000570883 CERCAMQ5T4B2 595 aa13.28□□□□□ -0.28
RPAIN-207ENST00000570883 PDPK2PQ6A1A2 396 aa13.28□□□□□ -0.28
RPAIN-207ENST00000570883 PRUNE1Q86TP1 453 aa13.28□□□□□ -0.28
RPAIN-207ENST00000570883 C17orf82Q86X59 251 aaPredicted RBP13.28□□□□□ -0.28
RPAIN-207ENST00000570883 GALNT13Q8IUC8 556 aa13.28□□□□□ -0.28
RPAIN-207ENST00000570883 REXO1L1PQ8IX06 675 aa13.28□□□□□ -0.28
RPAIN-207ENST00000570883 KDF1Q8NAX2 398 aaPredicted RBP13.28□□□□□ -0.28
RPAIN-207ENST00000570883 GLIS1Q8NBF1 620 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 293.6 ms