RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 OLFM3Q96PB7 478 aa12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 CEP41Q9BYV8 373 aa12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 DPH1Q9BZG8 443 aa12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 BRD8Q9H0E9 1235 aa12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 ATXN7L1Q9ULK2 861 aaPredicted RBP12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 TMEM98Q9Y2Y6 226 aa12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 LRP4O75096 1905 aa12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 PTPRQQ9UMZ3 2332 aa12.28□□□□□ -0.44
CTDNEP1-205ENST00000570828 RGSL1A5PLK6 1076 aa12.28□□□□□ -0.44
CTDNEP1-205ENST00000570828 CDRT15L2A8MXV6 281 aa12.28□□□□□ -0.44
CTDNEP1-205ENST00000570828 ANKRD66B4E2M5 251 aa12.28□□□□□ -0.44
CTDNEP1-205ENST00000570828 PSTPIP1O43586 416 aa12.28□□□□□ -0.44
CTDNEP1-205ENST00000570828 ASMTLO95671 621 aa12.28□□□□□ -0.44
CTDNEP1-205ENST00000570828 ECEL1O95672 775 aa12.28□□□□□ -0.44
CTDNEP1-205ENST00000570828 SLC4A1P02730 911 aa12.28□□□□□ -0.44
CTDNEP1-205ENST00000570828 FGF1P05230 155 aa12.28□□□□□ -0.44
CTDNEP1-205ENST00000570828 JMJD7P0C870 316 aa12.28□□□□□ -0.44
CTDNEP1-205ENST00000570828 MAGEA1P43355 309 aa12.28□□□□□ -0.44
CTDNEP1-205ENST00000570828 SPINT3P49223 89 aa12.28□□□□□ -0.44
CTDNEP1-205ENST00000570828 LRP8Q14114 963 aa12.28□□□□□ -0.44
CTDNEP1-205ENST00000570828 TFDP2Q14188 446 aa12.28□□□□□ -0.44
CTDNEP1-205ENST00000570828 AMZ1Q400G9 498 aa12.28□□□□□ -0.44
CTDNEP1-205ENST00000570828 BZW1Q7L1Q6 419 aaKnown RBP12.28□□□□□ -0.44
CTDNEP1-205ENST00000570828 CLEC14AQ86T13 490 aa12.28□□□□□ -0.44
CTDNEP1-205ENST00000570828 NT5DC3Q86UY8 548 aa12.28□□□□□ -0.44
CTDNEP1-205ENST00000570828 IMP4Q96G21 291 aaKnown RBP12.28□□□□□ -0.44
CTDNEP1-205ENST00000570828 SCARF2Q96GP6 870 aaPredicted RBP12.28□□□□□ -0.44
CTDNEP1-205ENST00000570828 COX14Q96I36 57 aa12.28□□□□□ -0.44
CTDNEP1-205ENST00000570828 AGAP2Q99490 1192 aa12.28□□□□□ -0.44
CTDNEP1-205ENST00000570828 FAM83DQ9H4H8 585 aa12.28□□□□□ -0.44
CTDNEP1-205ENST00000570828 LUC7LQ9NQ29 371 aaKnown RBP12.28□□□□□ -0.44
CTDNEP1-205ENST00000570828 LOXL2Q9Y4K0 774 aa12.28□□□□□ -0.44
CTDNEP1-205ENST00000570828 BPTFQ12830 3046 aa12.28□□□□□ -0.44
CTDNEP1-205ENST00000570828 TEX51A0A1B0GUA7 166 aa12.27□□□□□ -0.45
CTDNEP1-205ENST00000570828 KALRNO60229 2985 aa12.27□□□□□ -0.45
CTDNEP1-205ENST00000570828 CPNE6O95741 557 aa12.27□□□□□ -0.45
CTDNEP1-205ENST00000570828 ALDH4A1P30038 563 aa12.27□□□□□ -0.45
CTDNEP1-205ENST00000570828 UGT1A5P35504 534 aa12.27□□□□□ -0.45
CTDNEP1-205ENST00000570828 CDKN2BP42772 138 aa12.27□□□□□ -0.45
CTDNEP1-205ENST00000570828 NR2C2P49116 596 aa12.27□□□□□ -0.45
CTDNEP1-205ENST00000570828 SPA17Q15506 151 aa12.27□□□□□ -0.45
CTDNEP1-205ENST00000570828 PCSK7Q16549 785 aa12.27□□□□□ -0.45
CTDNEP1-205ENST00000570828 PYCR3Q53H96 274 aa12.27□□□□□ -0.45
CTDNEP1-205ENST00000570828 PHF19Q5T6S3 580 aa12.27□□□□□ -0.45
CTDNEP1-205ENST00000570828 HENMT1Q5T8I9 393 aaKnown RBP12.27□□□□□ -0.45
CTDNEP1-205ENST00000570828 MFSD7Q6UXD7 560 aa12.27□□□□□ -0.45
CTDNEP1-205ENST00000570828 LYSMD3Q7Z3D4 306 aa12.27□□□□□ -0.45
CTDNEP1-205ENST00000570828 KDELC2Q7Z4H8 507 aa12.27□□□□□ -0.45
CTDNEP1-205ENST00000570828 ZNF438Q7Z4V0 828 aa12.27□□□□□ -0.45
CTDNEP1-205ENST00000570828 PIM3Q86V86 326 aa12.27□□□□□ -0.45
CTDNEP1-205ENST00000570828 C17orf82Q86X59 251 aaPredicted RBP12.27□□□□□ -0.45
CTDNEP1-205ENST00000570828 JAMLQ86YT9 394 aa12.27□□□□□ -0.45
CTDNEP1-205ENST00000570828 TC2NQ8N9U0 490 aa12.27□□□□□ -0.45
CTDNEP1-205ENST00000570828 TMEM159Q96B96 161 aa12.27□□□□□ -0.45
CTDNEP1-205ENST00000570828 BBC3Q96PG8 261 aaPredicted RBP12.27□□□□□ -0.45
CTDNEP1-205ENST00000570828 CMKLR1Q99788 373 aa12.27□□□□□ -0.45
CTDNEP1-205ENST00000570828 SLC6A16Q9GZN6 736 aa12.27□□□□□ -0.45
CTDNEP1-205ENST00000570828 SLC25A51Q9H1U9 297 aa12.27□□□□□ -0.45
CTDNEP1-205ENST00000570828 ZFYVE1Q9HBF4 777 aa12.27□□□□□ -0.45
CTDNEP1-205ENST00000570828 AKAP7Q9P0M2 348 aaPredicted RBP12.27□□□□□ -0.45
CTDNEP1-205ENST00000570828 VPS18Q9P253 973 aa12.27□□□□□ -0.45
CTDNEP1-205ENST00000570828 PISDQ9UG56 409 aa12.27□□□□□ -0.45
CTDNEP1-205ENST00000570828 ZNHIT2Q9UHR6 403 aa12.27□□□□□ -0.45
CTDNEP1-205ENST00000570828 PCDHGA7Q9Y5G6 932 aa12.27□□□□□ -0.45
CTDNEP1-205ENST00000570828 ST14Q9Y5Y6 855 aa12.27□□□□□ -0.45
CTDNEP1-205ENST00000570828 RP1P56715 2156 aa12.27□□□□□ -0.45
CTDNEP1-205ENST00000570828 COL27A1Q8IZC6 1860 aaPredicted RBP12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 A0A0A6YYK5 440 aaPredicted RBP12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 CST8O60676 142 aa12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 WFS1O76024 890 aa12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 ATP1A1P05023 1023 aaKnown RBP12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 HGFP14210 728 aa12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 CYLC1P35663 651 aaPredicted RBP12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 TNNT3P45378 269 aaPredicted RBP12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 GPR3P46089 330 aa12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 HADHBP55084 474 aaKnown RBP12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 OR1D5P58170 312 aa12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 B4GALNT1Q00973 533 aa12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 CDK18Q07002 472 aa12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 ZFP36L1Q07352 338 aaKnown RBP12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 COL9A2Q14055 689 aaPredicted RBP12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 NR1D2Q14995 579 aa12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 PRKD1Q15139 912 aaPredicted RBP12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 SLC14A2Q15849 920 aa12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 CLPPQ16740 277 aaPredicted RBP12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 ZNF569Q5MCW4 686 aa12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 KAZNQ674X7 775 aa12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 CCDC70Q6NSX1 233 aa12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 SPOCD1Q6ZMY3 1216 aa12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 B4GALNT4Q76KP1 1039 aa12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 CCDC50Q8IVM0 306 aa12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 SLITRK4Q8IW52 837 aa12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 CCDC170Q8IYT3 715 aa12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 NAGSQ8N159 534 aa12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 TFB1MQ8WVM0 346 aaKnown RBP12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 PATE1Q8WXA2 126 aa12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 TRIB3Q96RU7 358 aa12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 GOLPH3Q9H4A6 298 aa12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 RDH14Q9HBH5 336 aa12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 GLOD4Q9HC38 313 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms