RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 PDHA1P08559 390 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 EBLN1P0CF75 366 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 GOLGA6DP0CG33 693 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 ACP5P13686 325 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 BRAFP15056 766 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 KELP23276 732 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 PTPN4P29074 926 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 GARSP41250 739 aaKnown RBP7.11□□□□□ -1.27
SMG6-205ENST00000570659 SLC19A1P41440 591 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 PPM1FP49593 454 aaPredicted RBP7.11□□□□□ -1.27
SMG6-205ENST00000570659 PAPOLAP51003 745 aaKnown RBP7.11□□□□□ -1.27
SMG6-205ENST00000570659 PTP4A2Q12974 167 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 BIRC2Q13490 618 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 RAPGEF1Q13905 1077 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 LLGL1Q15334 1064 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 COBLL1Q53SF7 1204 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 RAET1GQ6H3X3 334 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 KLHL10Q6JEL2 608 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 BRAT1Q6PJG6 821 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 FAM198BQ6UWH4 519 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 LYSMD3Q7Z3D4 306 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 FJX1Q86VR8 437 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 KCNMB4Q86W47 210 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 DNAAF5Q86Y56 855 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 SLC34A3Q8N130 599 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.11□□□□□ -1.27
SMG6-205ENST00000570659 HCAR2Q8TDS4 363 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 UBE2Q2Q8WVN8 375 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 ITLN2Q8WWU7 325 aaPredicted RBP7.11□□□□□ -1.27
SMG6-205ENST00000570659 MOCOSQ96EN8 888 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 COX14Q96I36 57 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 ZNF641Q96N77 438 aaPredicted RBP7.11□□□□□ -1.27
SMG6-205ENST00000570659 SMAD5Q99717 465 aaKnown RBP7.11□□□□□ -1.27
SMG6-205ENST00000570659 MESP1Q9BRJ9 268 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 ZPBPQ9BS86 351 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 SARS2Q9NP81 518 aaKnown RBP7.11□□□□□ -1.27
SMG6-205ENST00000570659 ACSS2Q9NR19 701 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 PHPT1Q9NRX4 125 aaPredicted RBP7.11□□□□□ -1.27
SMG6-205ENST00000570659 GOLGA6AQ9NYA3 693 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 UBA2Q9UBT2 640 aaPredicted RBP7.11□□□□□ -1.27
SMG6-205ENST00000570659 USP25Q9UHP3 1055 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 PADI1Q9ULC6 663 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 SIK3Q9Y2K2 1263 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 PCDHGA10Q9Y5H3 936 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 ABCA2Q9BZC7 2435 aa7.11□□□□□ -1.27
SMG6-205ENST00000570659 CFAP69A5D8W1 941 aa7.1□□□□□ -1.27
SMG6-205ENST00000570659 C2CD4BA6NLJ0 364 aa7.1□□□□□ -1.27
SMG6-205ENST00000570659 P4HA2O15460 535 aa7.1□□□□□ -1.27
SMG6-205ENST00000570659 ATMINO43313 823 aaPredicted RBP7.1□□□□□ -1.27
SMG6-205ENST00000570659 CNOT3O75175 753 aaKnown RBP7.1□□□□□ -1.27
SMG6-205ENST00000570659 TMEM63AO94886 807 aa7.1□□□□□ -1.27
SMG6-205ENST00000570659 F9P00740 461 aa7.1□□□□□ -1.27
SMG6-205ENST00000570659 MMEP08473 750 aa7.1□□□□□ -1.27
SMG6-205ENST00000570659 CHRNB2P17787 502 aa7.1□□□□□ -1.27
SMG6-205ENST00000570659 PON1P27169 355 aa7.1□□□□□ -1.27
SMG6-205ENST00000570659 SUOXP51687 545 aa7.1□□□□□ -1.27
SMG6-205ENST00000570659 NOMO3P69849 1222 aa7.1□□□□□ -1.27
SMG6-205ENST00000570659 OGDHQ02218 1023 aa7.1□□□□□ -1.27
SMG6-205ENST00000570659 SLC10A7Q0GE19 358 aa7.1□□□□□ -1.27
SMG6-205ENST00000570659 ABRQ12979 859 aa7.1□□□□□ -1.27
SMG6-205ENST00000570659 GPR19Q15760 415 aa7.1□□□□□ -1.27
SMG6-205ENST00000570659 TSR1Q2NL82 804 aaKnown RBP7.1□□□□□ -1.27
SMG6-205ENST00000570659 PLA2G4EQ3MJ16 856 aa7.1□□□□□ -1.27
SMG6-205ENST00000570659 KHDC1Q4VXA5 237 aaKnown RBP7.1□□□□□ -1.27
SMG6-205ENST00000570659 NAA35Q5VZE5 725 aa7.1□□□□□ -1.27
SMG6-205ENST00000570659 SPNS3Q6ZMD2 512 aa7.1□□□□□ -1.27
SMG6-205ENST00000570659 NCCRP1Q6ZVX7 275 aaPredicted RBP7.1□□□□□ -1.27
SMG6-205ENST00000570659 CHST15Q7LFX5 561 aaPredicted RBP7.1□□□□□ -1.27
SMG6-205ENST00000570659 UMODL1-AS1Q8N2C9 162 aa7.1□□□□□ -1.27
SMG6-205ENST00000570659 ENDOVQ8N8Q3 282 aaKnown RBP7.1□□□□□ -1.27
SMG6-205ENST00000570659 SLC30A5Q8TAD4 765 aa7.1□□□□□ -1.27
SMG6-205ENST00000570659 KLHL6Q8WZ60 621 aa7.1□□□□□ -1.27
SMG6-205ENST00000570659 CENPIQ92674 756 aaPredicted RBP7.1□□□□□ -1.27
SMG6-205ENST00000570659 C18orf8Q96DM3 657 aa7.1□□□□□ -1.27
SMG6-205ENST00000570659 DPYSL5Q9BPU6 564 aa7.1□□□□□ -1.27
SMG6-205ENST00000570659 SLC29A3Q9BZD2 475 aa7.1□□□□□ -1.27
SMG6-205ENST00000570659 GSX1Q9H4S2 264 aaPredicted RBP7.1□□□□□ -1.27
SMG6-205ENST00000570659 SYNCQ9H7C4 482 aa7.1□□□□□ -1.27
SMG6-205ENST00000570659 CPNE7Q9UBL6 633 aa7.1□□□□□ -1.27
SMG6-205ENST00000570659 MAN1B1Q9UKM7 699 aa7.1□□□□□ -1.27
SMG6-205ENST00000570659 CTNND2Q9UQB3 1225 aa7.1□□□□□ -1.27
SMG6-205ENST00000570659 ZNF451Q9Y4E5 1061 aa7.1□□□□□ -1.27
SMG6-205ENST00000570659 PCDHGB7Q9Y5F8 929 aa7.1□□□□□ -1.27
SMG6-205ENST00000570659 ADGRG1Q9Y653 693 aa7.1□□□□□ -1.27
SMG6-205ENST00000570659 PRRC2AP48634 2157 aaKnown RBP7.1□□□□□ -1.27
SMG6-205ENST00000570659 NUP210LQ5VU65 1888 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 OR52A4PA6NMU1 304 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 K7ELQ4 463 aaPredicted RBP7.09□□□□□ -1.27
SMG6-205ENST00000570659 HTRA2O43464 458 aaPredicted RBP7.09□□□□□ -1.27
SMG6-205ENST00000570659 CREB3O43889 395 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 DPM1O60762 260 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 RECKO95980 971 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 CTSBP07858 339 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 ATXN8OSP0DMR3 200 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 CYP11B1P15538 503 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 NELFEP18615 380 aaKnown RBP7.09□□□□□ -1.27
SMG6-205ENST00000570659 EPHB2P29323 1055 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 VIPR1P32241 457 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 RFC1P35251 1148 aaPredicted RBP7.09□□□□□ -1.27
SMG6-205ENST00000570659 SCNN1BP51168 640 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms