RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 SYT17Q9BSW7 474 aa8.04□□□□□ -1.12
TCF4-246ENST00000570287 SNRNP25Q9BV90 132 aaKnown RBP8.04□□□□□ -1.12
TCF4-246ENST00000570287 FKBP14Q9NWM8 211 aa8.04□□□□□ -1.12
TCF4-246ENST00000570287 COQ3Q9NZJ6 369 aa8.04□□□□□ -1.12
TCF4-246ENST00000570287 SOX13Q9UN79 622 aa8.04□□□□□ -1.12
TCF4-246ENST00000570287 GINS2Q9Y248 185 aa8.04□□□□□ -1.12
TCF4-246ENST00000570287 TEX264Q9Y6I9 313 aa8.04□□□□□ -1.12
TCF4-246ENST00000570287 PDCD11Q14690 1871 aaKnown RBP8.03□□□□□ -1.12
TCF4-246ENST00000570287 SF3B1O75533 1304 aaKnown RBP eCLIP8.03□□□□□ -1.12
TCF4-246ENST00000570287 SLC15A5A6NIM6 579 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 H3BSA7 217 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 PIRO00625 290 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 TEX28O15482 410 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 KCNN4O15554 427 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 GOSR1O95249 250 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 STAMBPO95630 424 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 SERPINF1P36955 418 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 ETV3P41162 512 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 PNPLA4P41247 253 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 ELK3P41970 407 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 PPP5CP53041 499 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 BCAT1P54687 386 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 FAPQ12884 760 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 ITGA7Q13683 1181 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 SEMA3AQ14563 771 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 CCDC153Q494R4 210 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 DEPDC1Q5TB30 811 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 RWDD4Q6NW29 188 aaKnown RBP8.03□□□□□ -1.12
TCF4-246ENST00000570287 C18orf25Q96B23 403 aaPredicted RBP8.03□□□□□ -1.12
TCF4-246ENST00000570287 ZNF560Q96MR9 790 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 RBM14Q96PK6 669 aaKnown RBP8.03□□□□□ -1.12
TCF4-246ENST00000570287 SLC30A3Q99726 388 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 C11orf84Q9BUA3 381 aaPredicted RBP8.03□□□□□ -1.12
TCF4-246ENST00000570287 MRPL1Q9BYD6 325 aaKnown RBP8.03□□□□□ -1.12
TCF4-246ENST00000570287 Q9H521 79 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 PNPLA8Q9NP80 782 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 SIRT5Q9NXA8 310 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 GDAP2Q9NXN4 497 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 NSMCE4AQ9NXX6 385 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 SLC17A7Q9P2U7 560 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 CDH7Q9ULB5 785 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 ZNF236Q9UL36 1845 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 IQANK1A0A1B0GTG1 560 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 RNF223E7ERA6 249 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 ZNF701M0R085 212 aaPredicted RBP8.03□□□□□ -1.12
TCF4-246ENST00000570287 RECQL4O94761 1208 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 NDST3O95803 873 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 ENO1P06733 434 aaKnown RBP8.03□□□□□ -1.12
TCF4-246ENST00000570287 CYP2C9P11712 490 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 ZNF23P17027 643 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 ACADSBP45954 432 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 CPA2P48052 419 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 AFF3P51826 1226 aaKnown RBP8.03□□□□□ -1.12
TCF4-246ENST00000570287 RPS3AP61247 264 aaKnown RBP8.03□□□□□ -1.12
TCF4-246ENST00000570287 FKBP1BP68106 108 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 PLAURQ03405 335 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 DPYSL2Q16555 572 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 FBXO47Q5MNV8 452 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 CPZQ66K79 652 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 CDKL3Q8IVW4 592 aaPredicted RBP8.03□□□□□ -1.12
TCF4-246ENST00000570287 C2orf69Q8N8R5 385 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 NPLOC4Q8TAT6 608 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 STT3BQ8TCJ2 826 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 ACTRT2Q8TDY3 377 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 GIPC3Q8TF64 312 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 CCDC177Q9NQR7 707 aaPredicted RBP8.03□□□□□ -1.12
TCF4-246ENST00000570287 NDFIP2Q9NV92 336 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 SLC38A7Q9NVC3 462 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 GPATCH2LQ9NWQ4 482 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 IGSF9Q9P2J2 1179 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 SLC39A10Q9ULF5 831 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 MAD1L1Q9Y6D9 718 aa8.03□□□□□ -1.12
TCF4-246ENST00000570287 FAM237BA0A1B0GVD1 139 aa8.02□□□□□ -1.13
TCF4-246ENST00000570287 C2orf71A6NGG8 1288 aa8.02□□□□□ -1.13
TCF4-246ENST00000570287 DYNC1LI2O43237 492 aaPredicted RBP8.02□□□□□ -1.13
TCF4-246ENST00000570287 ADCY6O43306 1168 aa8.02□□□□□ -1.13
TCF4-246ENST00000570287 THBDP07204 575 aa8.02□□□□□ -1.13
TCF4-246ENST00000570287 SERPINA6P08185 405 aa8.02□□□□□ -1.13
TCF4-246ENST00000570287 KCNE1P15382 129 aa8.02□□□□□ -1.13
TCF4-246ENST00000570287 RBL1P28749 1068 aa8.02□□□□□ -1.13
TCF4-246ENST00000570287 PRDX6P30041 224 aa8.02□□□□□ -1.13
TCF4-246ENST00000570287 BCAP31P51572 246 aa8.02□□□□□ -1.13
TCF4-246ENST00000570287 ZNF200P98182 395 aaPredicted RBP8.02□□□□□ -1.13
TCF4-246ENST00000570287 GBE1Q04446 702 aa8.02□□□□□ -1.13
TCF4-246ENST00000570287 SLC18A2Q05940 514 aa8.02□□□□□ -1.13
TCF4-246ENST00000570287 CA9Q16790 459 aa8.02□□□□□ -1.13
TCF4-246ENST00000570287 XKR4Q5GH76 650 aa8.02□□□□□ -1.13
TCF4-246ENST00000570287 DCDC5Q6ZRR9 648 aa8.02□□□□□ -1.13
TCF4-246ENST00000570287 IGDCC3Q8IVU1 814 aa8.02□□□□□ -1.13
TCF4-246ENST00000570287 SLC25A41Q8N5S1 370 aa8.02□□□□□ -1.13
TCF4-246ENST00000570287 SHKBP1Q8TBC3 707 aa8.02□□□□□ -1.13
TCF4-246ENST00000570287 KBTBD7Q8WVZ9 684 aa8.02□□□□□ -1.13
TCF4-246ENST00000570287 SLC44A1Q8WWI5 657 aa8.02□□□□□ -1.13
TCF4-246ENST00000570287 DCUN1D1Q96GG9 259 aa8.02□□□□□ -1.13
TCF4-246ENST00000570287 HSFY1Q96LI6 401 aa8.02□□□□□ -1.13
TCF4-246ENST00000570287 HEPHQ9BQS7 1158 aa8.02□□□□□ -1.13
TCF4-246ENST00000570287 KLF16Q9BXK1 252 aaPredicted RBP8.02□□□□□ -1.13
TCF4-246ENST00000570287 ZDHHC5Q9C0B5 715 aa8.02□□□□□ -1.13
TCF4-246ENST00000570287 DPEP3Q9H4B8 488 aa8.02□□□□□ -1.13
TCF4-246ENST00000570287 NXF3Q9H4D5 531 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms