RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 HENMT1Q5T8I9 393 aaKnown RBP17.54■□□□□ 0.4
NME3-205ENST00000563854 NKAIN2Q5VXU1 208 aa17.54■□□□□ 0.4
NME3-205ENST00000563854 SPOCD1Q6ZMY3 1216 aa17.54■□□□□ 0.4
NME3-205ENST00000563854 NLRP8Q86W28 1048 aa17.54■□□□□ 0.4
NME3-205ENST00000563854 C17orf82Q86X59 251 aaPredicted RBP17.54■□□□□ 0.4
NME3-205ENST00000563854 ZNF761Q86XN6 746 aaPredicted RBP17.54■□□□□ 0.4
NME3-205ENST00000563854 CCDC50Q8IVM0 306 aa17.54■□□□□ 0.4
NME3-205ENST00000563854 TC2NQ8N9U0 490 aa17.54■□□□□ 0.4
NME3-205ENST00000563854 SLC39A7Q92504 469 aa17.54■□□□□ 0.4
NME3-205ENST00000563854 SCARF2Q96GP6 870 aaPredicted RBP17.54■□□□□ 0.4
NME3-205ENST00000563854 CMKLR1Q99788 373 aa17.54■□□□□ 0.4
NME3-205ENST00000563854 SPATA16Q9BXB7 569 aa17.54■□□□□ 0.4
NME3-205ENST00000563854 GPR63Q9BZJ6 419 aa17.54■□□□□ 0.4
NME3-205ENST00000563854 SLC25A51Q9H1U9 297 aa17.54■□□□□ 0.4
NME3-205ENST00000563854 ZFYVE1Q9HBF4 777 aa17.54■□□□□ 0.4
NME3-205ENST00000563854 UBP1Q9NZI7 540 aa17.54■□□□□ 0.4
NME3-205ENST00000563854 KCNK6Q9Y257 313 aa17.54■□□□□ 0.4
NME3-205ENST00000563854 ZNF711Q9Y462 761 aa17.54■□□□□ 0.4
NME3-205ENST00000563854 PCYT1BQ9Y5K3 369 aaPredicted RBP17.54■□□□□ 0.4
NME3-205ENST00000563854 ARHGEF17Q96PE2 2063 aaPredicted RBP17.54■□□□□ 0.4
NME3-205ENST00000563854 A0A0A6YYK5 440 aaPredicted RBP17.53■□□□□ 0.4
NME3-205ENST00000563854 ATXN7O15265 892 aaPredicted RBP17.53■□□□□ 0.4
NME3-205ENST00000563854 PPM1DO15297 605 aa17.53■□□□□ 0.4
NME3-205ENST00000563854 PSTPIP1O43586 416 aa17.53■□□□□ 0.4
NME3-205ENST00000563854 CST8O60676 142 aa17.53■□□□□ 0.4
NME3-205ENST00000563854 SNX2O60749 519 aa17.53■□□□□ 0.4
NME3-205ENST00000563854 MT-CYBP00156 380 aaPredicted RBP17.53■□□□□ 0.4
NME3-205ENST00000563854 ACP5P13686 325 aa17.53■□□□□ 0.4
NME3-205ENST00000563854 ETV5P41161 510 aa17.53■□□□□ 0.4
NME3-205ENST00000563854 CDK18Q07002 472 aa17.53■□□□□ 0.4
NME3-205ENST00000563854 CLN3Q13286 438 aa17.53■□□□□ 0.4
NME3-205ENST00000563854 LRP8Q14114 963 aa17.53■□□□□ 0.4
NME3-205ENST00000563854 TFDP2Q14188 446 aa17.53■□□□□ 0.4
NME3-205ENST00000563854 ZNF569Q5MCW4 686 aa17.53■□□□□ 0.4
NME3-205ENST00000563854 ZNF648Q5T619 568 aaPredicted RBP17.53■□□□□ 0.4
NME3-205ENST00000563854 CCDC70Q6NSX1 233 aa17.53■□□□□ 0.4
NME3-205ENST00000563854 SARM1Q6SZW1 724 aa17.53■□□□□ 0.4
NME3-205ENST00000563854 ZNF438Q7Z4V0 828 aa17.53■□□□□ 0.4
NME3-205ENST00000563854 SLITRK4Q8IW52 837 aa17.53■□□□□ 0.4
NME3-205ENST00000563854 RCBTB1Q8NDN9 531 aa17.53■□□□□ 0.4
NME3-205ENST00000563854 SLC37A2Q8TED4 501 aa17.53■□□□□ 0.4
NME3-205ENST00000563854 TFB1MQ8WVM0 346 aaKnown RBP17.53■□□□□ 0.4
NME3-205ENST00000563854 TRIB3Q96RU7 358 aa17.53■□□□□ 0.4
NME3-205ENST00000563854 GLOD4Q9HC38 313 aa17.53■□□□□ 0.4
NME3-205ENST00000563854 KCNK4Q9NYG8 393 aa17.53■□□□□ 0.4
NME3-205ENST00000563854 AKAP7Q9P0M2 348 aaPredicted RBP17.53■□□□□ 0.4
NME3-205ENST00000563854 VPS18Q9P253 973 aa17.53■□□□□ 0.4
NME3-205ENST00000563854 CNOT6Q9ULM6 557 aaKnown RBP17.53■□□□□ 0.4
NME3-205ENST00000563854 ALG6Q9Y672 507 aa17.53■□□□□ 0.4
NME3-205ENST00000563854 BPTFQ12830 3046 aa17.53■□□□□ 0.4
NME3-205ENST00000563854 PRAMEF33A0A0G2JMD5 474 aa17.52■□□□□ 0.4
NME3-205ENST00000563854 PRAMEF10O60809 474 aa17.52■□□□□ 0.4
NME3-205ENST00000563854 DNAJC6O75061 913 aa17.52■□□□□ 0.4
NME3-205ENST00000563854 EML2O95834 649 aa17.52■□□□□ 0.4
NME3-205ENST00000563854 MPSTP25325 297 aa17.52■□□□□ 0.4
NME3-205ENST00000563854 PTPN3P26045 913 aa17.52■□□□□ 0.4
NME3-205ENST00000563854 MARCKSL1P49006 195 aa17.52■□□□□ 0.4
NME3-205ENST00000563854 VAC14Q08AM6 782 aa17.52■□□□□ 0.4
NME3-205ENST00000563854 C16orf72Q14CZ0 275 aa17.52■□□□□ 0.4
NME3-205ENST00000563854 TCEAL1Q15170 157 aa17.52■□□□□ 0.4
NME3-205ENST00000563854 SPA17Q15506 151 aa17.52■□□□□ 0.4
NME3-205ENST00000563854 TEX44Q53QW1 395 aa17.52■□□□□ 0.4
NME3-205ENST00000563854 TAF1BQ53T94 588 aaPredicted RBP17.52■□□□□ 0.4
NME3-205ENST00000563854 BZW1Q7L1Q6 419 aaKnown RBP17.52■□□□□ 0.4
NME3-205ENST00000563854 ZC3H18Q86VM9 953 aaKnown RBP17.52■□□□□ 0.4
NME3-205ENST00000563854 GPR26Q8NDV2 337 aa17.52■□□□□ 0.4
NME3-205ENST00000563854 EID2BQ96D98 161 aa17.52■□□□□ 0.4
NME3-205ENST00000563854 CCDC74BQ96LY2 380 aa17.52■□□□□ 0.4
NME3-205ENST00000563854 PCDHGA7Q9Y5G6 932 aa17.52■□□□□ 0.4
NME3-205ENST00000563854 PCDHA13Q9Y5I0 950 aa17.52■□□□□ 0.4
NME3-205ENST00000563854 RGSL1A5PLK6 1076 aa17.51■□□□□ 0.39
NME3-205ENST00000563854 CD1CP29017 333 aa17.51■□□□□ 0.39
NME3-205ENST00000563854 CYLC1P35663 651 aaPredicted RBP17.51■□□□□ 0.39
NME3-205ENST00000563854 GPR3P46089 330 aa17.51■□□□□ 0.39
NME3-205ENST00000563854 NR2C2P49116 596 aa17.51■□□□□ 0.39
NME3-205ENST00000563854 NFATC2Q13469 925 aa17.51■□□□□ 0.39
NME3-205ENST00000563854 NR1D2Q14995 579 aa17.51■□□□□ 0.39
NME3-205ENST00000563854 PRKD1Q15139 912 aaPredicted RBP17.51■□□□□ 0.39
NME3-205ENST00000563854 TGIF1Q15583 401 aa17.51■□□□□ 0.39
NME3-205ENST00000563854 PLA2G4EQ3MJ16 856 aa17.51■□□□□ 0.39
NME3-205ENST00000563854 CRTC3Q6UUV7 619 aa17.51■□□□□ 0.39
NME3-205ENST00000563854 CCDC81Q6ZN84 652 aa17.51■□□□□ 0.39
NME3-205ENST00000563854 RAVER1Q8IY67 606 aaKnown RBP17.51■□□□□ 0.39
NME3-205ENST00000563854 P3H4Q92791 437 aa17.51■□□□□ 0.39
NME3-205ENST00000563854 USP7Q93009 1102 aa17.51■□□□□ 0.39
NME3-205ENST00000563854 TMEM159Q96B96 161 aa17.51■□□□□ 0.39
NME3-205ENST00000563854 AHCYL2Q96HN2 611 aaKnown RBP17.51■□□□□ 0.39
NME3-205ENST00000563854 SLC38A3Q99624 504 aa17.51■□□□□ 0.39
NME3-205ENST00000563854 OR2AG1Q9H205 316 aa17.51■□□□□ 0.39
NME3-205ENST00000563854 OSGEPL1Q9H4B0 414 aa17.51■□□□□ 0.39
NME3-205ENST00000563854 KLHL8Q9P2G9 620 aaPredicted RBP17.51■□□□□ 0.39
NME3-205ENST00000563854 UNC13CQ8NB66 2214 aa17.51■□□□□ 0.39
NME3-205ENST00000563854 IGHV1OR21-1A0A087WYE8 117 aa17.5■□□□□ 0.39
NME3-205ENST00000563854 IGHV5-10-1A0A0J9YXX1 117 aa17.5■□□□□ 0.39
NME3-205ENST00000563854 GRID2O43424 1007 aa17.5■□□□□ 0.39
NME3-205ENST00000563854 SLC25A14O95258 325 aaPredicted RBP17.5■□□□□ 0.39
NME3-205ENST00000563854 NDST3O95803 873 aa17.5■□□□□ 0.39
NME3-205ENST00000563854 NFKB1P19838 968 aa17.5■□□□□ 0.39
NME3-205ENST00000563854 CSF2RBP32927 897 aa17.5■□□□□ 0.39
NME3-205ENST00000563854 TNNT3P45378 269 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms