RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 PRKAR1AP10644 381 aa10.07□□□□□ -0.8
SNX29-202ENST00000563308 MYCLP1P12525 358 aaPredicted RBP10.07□□□□□ -0.8
SNX29-202ENST00000563308 SERPINB6P35237 376 aa10.07□□□□□ -0.8
SNX29-202ENST00000563308 MRPL49Q13405 166 aaKnown RBP10.07□□□□□ -0.8
SNX29-202ENST00000563308 ELOAQ14241 798 aaKnown RBP10.07□□□□□ -0.8
SNX29-202ENST00000563308 HLTFQ14527 1009 aaKnown RBP eCLIP10.07□□□□□ -0.8
SNX29-202ENST00000563308 PAFAH1B3Q15102 231 aaKnown RBP10.07□□□□□ -0.8
SNX29-202ENST00000563308 NFKBIBQ15653 356 aa10.07□□□□□ -0.8
SNX29-202ENST00000563308 DEFB109BQ30KR1 87 aa10.07□□□□□ -0.8
SNX29-202ENST00000563308 ANKRD20A8PQ5CZ79 823 aa10.07□□□□□ -0.8
SNX29-202ENST00000563308 CERCAMQ5T4B2 595 aa10.07□□□□□ -0.8
SNX29-202ENST00000563308 NCBP2-AS2Q69YL0 99 aa10.07□□□□□ -0.8
SNX29-202ENST00000563308 ALG1LQ6GMV1 187 aa10.07□□□□□ -0.8
SNX29-202ENST00000563308 TCTN3Q6NUS6 607 aa10.07□□□□□ -0.8
SNX29-202ENST00000563308 Q6ZVL8 140 aa10.07□□□□□ -0.8
SNX29-202ENST00000563308 TECPR1Q7Z6L1 1165 aa10.07□□□□□ -0.8
SNX29-202ENST00000563308 C17orf82Q86X59 251 aaPredicted RBP10.07□□□□□ -0.8
SNX29-202ENST00000563308 DTX1Q86Y01 620 aa10.07□□□□□ -0.8
SNX29-202ENST00000563308 LRRC49Q8IUZ0 686 aa10.07□□□□□ -0.8
SNX29-202ENST00000563308 PQLC3Q8N755 202 aa10.07□□□□□ -0.8
SNX29-202ENST00000563308 FAM46DQ8NEK8 389 aa10.07□□□□□ -0.8
SNX29-202ENST00000563308 SPATA3Q8NHX4 192 aa10.07□□□□□ -0.8
SNX29-202ENST00000563308 USP7Q93009 1102 aa10.07□□□□□ -0.8
SNX29-202ENST00000563308 FAF2Q96CS3 445 aa10.07□□□□□ -0.8
SNX29-202ENST00000563308 NUS1Q96E22 293 aa10.07□□□□□ -0.8
SNX29-202ENST00000563308 TCTN2Q96GX1 697 aa10.07□□□□□ -0.8
SNX29-202ENST00000563308 GFM1Q96RP9 751 aaKnown RBP10.07□□□□□ -0.8
SNX29-202ENST00000563308 FRMD8Q9BZ67 464 aaPredicted RBP10.07□□□□□ -0.8
SNX29-202ENST00000563308 XPO4Q9C0E2 1151 aaKnown RBP10.07□□□□□ -0.8
SNX29-202ENST00000563308 CYP4F12Q9HCS2 524 aa10.07□□□□□ -0.8
SNX29-202ENST00000563308 NT5MQ9NPB1 228 aa10.07□□□□□ -0.8
SNX29-202ENST00000563308 APPL1Q9UKG1 709 aa10.07□□□□□ -0.8
SNX29-202ENST00000563308 DOLKQ9UPQ8 538 aa10.07□□□□□ -0.8
SNX29-202ENST00000563308 PRSS38A1L453 326 aa10.06□□□□□ -0.8
SNX29-202ENST00000563308 TCP11X1B4DZS4 312 aa10.06□□□□□ -0.8
SNX29-202ENST00000563308 PRSS44E7EML9 344 aa10.06□□□□□ -0.8
SNX29-202ENST00000563308 MATN3O15232 486 aa10.06□□□□□ -0.8
SNX29-202ENST00000563308 MAP3K6O95382 1288 aa10.06□□□□□ -0.8
SNX29-202ENST00000563308 PRLP01236 227 aa10.06□□□□□ -0.8
SNX29-202ENST00000563308 RPLP0P05388 317 aaKnown RBP10.06□□□□□ -0.8
SNX29-202ENST00000563308 CTPS1P17812 591 aa10.06□□□□□ -0.8
SNX29-202ENST00000563308 NR1D1P20393 614 aa10.06□□□□□ -0.8
SNX29-202ENST00000563308 KELP23276 732 aa10.06□□□□□ -0.8
SNX29-202ENST00000563308 TEAD1P28347 426 aa10.06□□□□□ -0.8
SNX29-202ENST00000563308 GARSP41250 739 aaKnown RBP10.06□□□□□ -0.8
SNX29-202ENST00000563308 PER3P56645 1201 aa10.06□□□□□ -0.8
SNX29-202ENST00000563308 TPM4P67936 248 aa10.06□□□□□ -0.8
SNX29-202ENST00000563308 PTSQ03393 145 aa10.06□□□□□ -0.8
SNX29-202ENST00000563308 GBE1Q04446 702 aa10.06□□□□□ -0.8
SNX29-202ENST00000563308 DPTQ07507 201 aa10.06□□□□□ -0.8
SNX29-202ENST00000563308 NIPAL4Q0D2K0 466 aa10.06□□□□□ -0.8
SNX29-202ENST00000563308 SLC10A2Q12908 348 aaPredicted RBP10.06□□□□□ -0.8
SNX29-202ENST00000563308 KRT81Q14533 505 aa10.06□□□□□ -0.8
SNX29-202ENST00000563308 ARMC12Q5T9G4 340 aa10.06□□□□□ -0.8
SNX29-202ENST00000563308 TMPRSS9Q7Z410 1059 aa10.06□□□□□ -0.8
SNX29-202ENST00000563308 TAF8Q7Z7C8 310 aa10.06□□□□□ -0.8
SNX29-202ENST00000563308 PAF1Q8N7H5 531 aa10.06□□□□□ -0.8
SNX29-202ENST00000563308 OR6C4Q8NGE1 309 aa10.06□□□□□ -0.8
SNX29-202ENST00000563308 ARRDC2Q8TBH0 407 aa10.06□□□□□ -0.8
SNX29-202ENST00000563308 LRRN4Q8WUT4 740 aa10.06□□□□□ -0.8
SNX29-202ENST00000563308 FATE1Q969F0 183 aa10.06□□□□□ -0.8
SNX29-202ENST00000563308 KIAA1143Q96AT1 154 aaPredicted RBP10.06□□□□□ -0.8
SNX29-202ENST00000563308 TSGA13Q96PP4 275 aa10.06□□□□□ -0.8
SNX29-202ENST00000563308 DNAJC7Q99615 494 aa10.06□□□□□ -0.8
SNX29-202ENST00000563308 CMKLR1Q99788 373 aa10.06□□□□□ -0.8
SNX29-202ENST00000563308 EFHD1Q9BUP0 239 aa10.06□□□□□ -0.8
SNX29-202ENST00000563308 FOXP3Q9BZS1 431 aa10.06□□□□□ -0.8
SNX29-202ENST00000563308 LRRN3Q9H3W5 708 aa10.06□□□□□ -0.8
SNX29-202ENST00000563308 SPATS2LQ9NUQ6 558 aaKnown RBP10.06□□□□□ -0.8
SNX29-202ENST00000563308 SLC17A4Q9Y2C5 497 aa10.06□□□□□ -0.8
SNX29-202ENST00000563308 RNF215Q9Y6U7 377 aa10.06□□□□□ -0.8
SNX29-202ENST00000563308 A0A0J9YYE9 177 aa10.05□□□□□ -0.8
SNX29-202ENST00000563308 GOLGA6L19H0YKK7 550 aa10.05□□□□□ -0.8
SNX29-202ENST00000563308 PSMD11O00231 422 aa10.05□□□□□ -0.8
SNX29-202ENST00000563308 AGRPO00253 132 aa10.05□□□□□ -0.8
SNX29-202ENST00000563308 PDE2AO00408 941 aaPredicted RBP10.05□□□□□ -0.8
SNX29-202ENST00000563308 TRBC1P01850 177 aa10.05□□□□□ -0.8
SNX29-202ENST00000563308 FGF1P05230 155 aa10.05□□□□□ -0.8
SNX29-202ENST00000563308 CYP2A6P11509 494 aaPredicted RBP10.05□□□□□ -0.8
SNX29-202ENST00000563308 CD99P14209 185 aa10.05□□□□□ -0.8
SNX29-202ENST00000563308 CCNB1P14635 433 aa10.05□□□□□ -0.8
SNX29-202ENST00000563308 LIFP15018 202 aa10.05□□□□□ -0.8
SNX29-202ENST00000563308 PNLIPP16233 465 aa10.05□□□□□ -0.8
SNX29-202ENST00000563308 GLB1P16278 677 aa10.05□□□□□ -0.8
SNX29-202ENST00000563308 CCKBRP32239 447 aa10.05□□□□□ -0.8
SNX29-202ENST00000563308 SSR1P43307 286 aaKnown RBP10.05□□□□□ -0.8
SNX29-202ENST00000563308 POLD2P49005 469 aa10.05□□□□□ -0.8
SNX29-202ENST00000563308 CDK3Q00526 305 aa10.05□□□□□ -0.8
SNX29-202ENST00000563308 B4GALNT1Q00973 533 aa10.05□□□□□ -0.8
SNX29-202ENST00000563308 MC1RQ01726 317 aa10.05□□□□□ -0.8
SNX29-202ENST00000563308 DSC2Q02487 901 aa10.05□□□□□ -0.8
SNX29-202ENST00000563308 ZFP36L1Q07352 338 aaKnown RBP10.05□□□□□ -0.8
SNX29-202ENST00000563308 SLC18A3Q16572 532 aa10.05□□□□□ -0.8
SNX29-202ENST00000563308 C14orf28Q4W4Y0 310 aa10.05□□□□□ -0.8
SNX29-202ENST00000563308 LRRC66Q68CR7 880 aa10.05□□□□□ -0.8
SNX29-202ENST00000563308 DENND2CQ68D51 928 aa10.05□□□□□ -0.8
SNX29-202ENST00000563308 SPECC1LQ69YQ0 1117 aa10.05□□□□□ -0.8
SNX29-202ENST00000563308 SPRED1Q7Z699 444 aa10.05□□□□□ -0.8
SNX29-202ENST00000563308 CCNJLQ8IV13 435 aa10.05□□□□□ -0.8
SNX29-202ENST00000563308 BBS5Q8N3I7 341 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms