RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 CLEC11AQ9Y240 323 aa13.03□□□□□ -0.32
USB1-207ENST00000563149 RNF103-CHMP3A0A140T963 221 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 MYADML2A6NDP7 307 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 SUPT3HB4E1H0 165 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 TMEM189-UBE2V1I3L0A0 370 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 CCL22O00626 93 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 ARPC2O15144 300 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 KLK8O60259 260 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 SNAP91O60641 907 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 SUPT3HO75486 399 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 EEDO75530 441 aaKnown RBP13.02□□□□□ -0.32
USB1-207ENST00000563149 CRCPO75575 148 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 SOAT2O75908 522 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 RHOBTB1O94844 696 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 NDST3O95803 873 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 MLYCDO95822 493 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 CYBBP04839 570 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 ITGB1P05556 798 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 SERPINF2P08697 491 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 UROSP10746 265 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 PSMA3P25788 255 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 EEF1DP29692 281 aaKnown RBP13.02□□□□□ -0.32
USB1-207ENST00000563149 FOXA1P55317 472 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 RING1Q06587 406 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 SEMA3AQ14563 771 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 ZNF235Q14590 738 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 PDCD4Q53EL6 469 aaKnown RBP13.02□□□□□ -0.32
USB1-207ENST00000563149 PROSER1Q86XN7 944 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 EPHX4Q8IUS5 362 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 C2orf69Q8N8R5 385 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 TERB1Q8NA31 727 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 LEMD2Q8NC56 503 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 SH3RF2Q8TEC5 729 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 IGSF8Q969P0 613 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 PPP1R14BQ96C90 147 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 CDKN2AIPNLQ96HQ2 116 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 ZNF512Q96ME7 567 aaPredicted RBP13.02□□□□□ -0.32
USB1-207ENST00000563149 ADAM2Q99965 735 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 BRINP2Q9C0B6 783 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 CCDC68Q9H2F9 335 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 IL1RL2Q9HB29 575 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 SMOXQ9NWM0 555 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 ABI2Q9NYB9 513 aaPredicted RBP13.02□□□□□ -0.32
USB1-207ENST00000563149 LEF1Q9UJU2 399 aaPredicted RBP13.02□□□□□ -0.32
USB1-207ENST00000563149 VPS9D1Q9Y2B5 631 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 ARL5AQ9Y689 179 aa13.02□□□□□ -0.32
USB1-207ENST00000563149 H3BMM5 538 aa13.02□□□□□ -0.33
USB1-207ENST00000563149 PPP6CO00743 305 aa13.02□□□□□ -0.33
USB1-207ENST00000563149 IGLV3-27P01718 113 aa13.02□□□□□ -0.33
USB1-207ENST00000563149 PYGLP06737 847 aa13.02□□□□□ -0.33
USB1-207ENST00000563149 LINC00032P0C843 101 aa13.02□□□□□ -0.33
USB1-207ENST00000563149 HTR1EP28566 365 aa13.02□□□□□ -0.33
USB1-207ENST00000563149 EFEMP1Q12805 493 aa13.02□□□□□ -0.33
USB1-207ENST00000563149 NFYCQ13952 458 aa13.02□□□□□ -0.33
USB1-207ENST00000563149 RCAN2Q14206 197 aa13.02□□□□□ -0.33
USB1-207ENST00000563149 RAP1GAP2Q684P5 730 aa13.02□□□□□ -0.33
USB1-207ENST00000563149 AFTPHQ6ULP2 937 aa13.02□□□□□ -0.33
USB1-207ENST00000563149 ZNF598Q86UK7 904 aaKnown RBP13.02□□□□□ -0.33
USB1-207ENST00000563149 SPNS2Q8IVW8 549 aa13.02□□□□□ -0.33
USB1-207ENST00000563149 CMTR2Q8IYT2 770 aaKnown RBP13.02□□□□□ -0.33
USB1-207ENST00000563149 PNPLA1Q8N8W4 532 aa13.02□□□□□ -0.33
USB1-207ENST00000563149 OR13C4Q8NGS5 318 aa13.02□□□□□ -0.33
USB1-207ENST00000563149 TMIGD2Q96BF3 282 aa13.02□□□□□ -0.33
USB1-207ENST00000563149 SPC25Q9HBM1 224 aa13.02□□□□□ -0.33
USB1-207ENST00000563149 COMMD8Q9NX08 183 aa13.02□□□□□ -0.33
USB1-207ENST00000563149 ZIM2Q9NZV7 527 aa13.02□□□□□ -0.33
USB1-207ENST00000563149 GMIPQ9P107 970 aa13.02□□□□□ -0.33
USB1-207ENST00000563149 GMPR2Q9P2T1 348 aaKnown RBP13.02□□□□□ -0.33
USB1-207ENST00000563149 EGFL7Q9UHF1 273 aa13.02□□□□□ -0.33
USB1-207ENST00000563149 PCDHB5Q9Y5E4 795 aa13.02□□□□□ -0.33
USB1-207ENST00000563149 MRPL42Q9Y6G3 142 aaKnown RBP13.02□□□□□ -0.33
USB1-207ENST00000563149 TCRBV5S2A0A599 114 aa13.01□□□□□ -0.33
USB1-207ENST00000563149 LRRC14BA6NHZ5 514 aa13.01□□□□□ -0.33
USB1-207ENST00000563149 PFDN6O15212 129 aa13.01□□□□□ -0.33
USB1-207ENST00000563149 ACOX3O15254 700 aa13.01□□□□□ -0.33
USB1-207ENST00000563149 ESRRBO95718 433 aa13.01□□□□□ -0.33
USB1-207ENST00000563149 OR4Q2P0C623 313 aa13.01□□□□□ -0.33
USB1-207ENST00000563149 RFC2P35250 354 aa13.01□□□□□ -0.33
USB1-207ENST00000563149 ETFBP38117 255 aa13.01□□□□□ -0.33
USB1-207ENST00000563149 THPOP40225 353 aa13.01□□□□□ -0.33
USB1-207ENST00000563149 GSK3BP49841 420 aa13.01□□□□□ -0.33
USB1-207ENST00000563149 KPNA1P52294 538 aaPredicted RBP13.01□□□□□ -0.33
USB1-207ENST00000563149 NKX3-2P78367 333 aa13.01□□□□□ -0.33
USB1-207ENST00000563149 EML3Q32P44 896 aa13.01□□□□□ -0.33
USB1-207ENST00000563149 XKR7Q5GH72 579 aa13.01□□□□□ -0.33
USB1-207ENST00000563149 CXCL17Q6UXB2 119 aa13.01□□□□□ -0.33
USB1-207ENST00000563149 ZNF420Q8TAQ5 688 aaPredicted RBP13.01□□□□□ -0.33
USB1-207ENST00000563149 NSUN5Q96P11 429 aaKnown RBP13.01□□□□□ -0.33
USB1-207ENST00000563149 RPRD1AQ96P16 312 aaPredicted RBP13.01□□□□□ -0.33
USB1-207ENST00000563149 TRIB3Q96RU7 358 aa13.01□□□□□ -0.33
USB1-207ENST00000563149 KCTD14Q9BQ13 255 aaPredicted RBP13.01□□□□□ -0.33
USB1-207ENST00000563149 ALG2Q9H553 416 aa13.01□□□□□ -0.33
USB1-207ENST00000563149 PDFQ9HBH1 243 aa13.01□□□□□ -0.33
USB1-207ENST00000563149 TLR8Q9NR97 1041 aaKnown RBP13.01□□□□□ -0.33
USB1-207ENST00000563149 RIC8BQ9NVN3 520 aa13.01□□□□□ -0.33
USB1-207ENST00000563149 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.01□□□□□ -0.33
USB1-207ENST00000563149 ANAPC2Q9UJX6 822 aa13.01□□□□□ -0.33
USB1-207ENST00000563149 ARIH1Q9Y4X5 557 aaPredicted RBP13.01□□□□□ -0.33
USB1-207ENST00000563149 OAS3Q9Y6K5 1087 aaKnown RBP13.01□□□□□ -0.33
USB1-207ENST00000563149 CCDC154A6NI56 674 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms