RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 HTR1BP28222 390 aa6.15□□□□□ -1.42
CNOT1-204ENST00000563130 RPL22P35268 128 aaKnown RBP6.15□□□□□ -1.42
CNOT1-204ENST00000563130 GRK6P43250 576 aa6.15□□□□□ -1.42
CNOT1-204ENST00000563130 HK3P52790 923 aa6.15□□□□□ -1.42
CNOT1-204ENST00000563130 HNRNPKP61978 463 aaKnown RBP eCLIP6.15□□□□□ -1.42
CNOT1-204ENST00000563130 IL9RQ01113 521 aa6.15□□□□□ -1.42
CNOT1-204ENST00000563130 ALG11Q2TAA5 492 aa6.15□□□□□ -1.42
CNOT1-204ENST00000563130 OXLD1Q5BKU9 147 aa6.15□□□□□ -1.42
CNOT1-204ENST00000563130 ZNF542PQ5EBM4 170 aa6.15□□□□□ -1.42
CNOT1-204ENST00000563130 FAXCQ5TGI0 409 aa6.15□□□□□ -1.42
CNOT1-204ENST00000563130 TTC27Q6P3X3 843 aa6.15□□□□□ -1.42
CNOT1-204ENST00000563130 GLRX5Q86SX6 157 aa6.15□□□□□ -1.42
CNOT1-204ENST00000563130 CREG2Q8IUH2 290 aa6.15□□□□□ -1.42
CNOT1-204ENST00000563130 ATL2Q8NHH9 583 aa6.15□□□□□ -1.42
CNOT1-204ENST00000563130 COX14Q96I36 57 aa6.15□□□□□ -1.42
CNOT1-204ENST00000563130 WDR92Q96MX6 357 aa6.15□□□□□ -1.42
CNOT1-204ENST00000563130 CAMK1GQ96NX5 476 aa6.15□□□□□ -1.42
CNOT1-204ENST00000563130 PLEKHG4BQ96PX9 1271 aa6.15□□□□□ -1.42
CNOT1-204ENST00000563130 NAP1L3Q99457 506 aaPredicted RBP6.15□□□□□ -1.42
CNOT1-204ENST00000563130 TBL1YQ9BQ87 522 aa6.15□□□□□ -1.42
CNOT1-204ENST00000563130 APOL2Q9BQE5 337 aa6.15□□□□□ -1.42
CNOT1-204ENST00000563130 RIOK2Q9BVS4 552 aaKnown RBP6.15□□□□□ -1.42
CNOT1-204ENST00000563130 FRMD8Q9BZ67 464 aaPredicted RBP6.15□□□□□ -1.42
CNOT1-204ENST00000563130 GPR63Q9BZJ6 419 aa6.15□□□□□ -1.42
CNOT1-204ENST00000563130 TCEAL2Q9H3H9 227 aaPredicted RBP6.15□□□□□ -1.42
CNOT1-204ENST00000563130 FAM83DQ9H4H8 585 aa6.15□□□□□ -1.42
CNOT1-204ENST00000563130 LRRC40Q9H9A6 602 aa6.15□□□□□ -1.42
CNOT1-204ENST00000563130 ETNK1Q9HBU6 452 aa6.15□□□□□ -1.42
CNOT1-204ENST00000563130 FGF22Q9HCT0 170 aa6.15□□□□□ -1.42
CNOT1-204ENST00000563130 UCKL1Q9NWZ5 548 aa6.15□□□□□ -1.42
CNOT1-204ENST00000563130 DNAJC28Q9NX36 388 aa6.15□□□□□ -1.42
CNOT1-204ENST00000563130 SMARCAL1Q9NZC9 954 aa6.15□□□□□ -1.42
CNOT1-204ENST00000563130 PAK5Q9P286 719 aa6.15□□□□□ -1.42
CNOT1-204ENST00000563130 FEZ2Q9UHY8 353 aaPredicted RBP6.15□□□□□ -1.42
CNOT1-204ENST00000563130 SLC17A4Q9Y2C5 497 aa6.15□□□□□ -1.42
CNOT1-204ENST00000563130 NEU2Q9Y3R4 380 aa6.15□□□□□ -1.42
CNOT1-204ENST00000563130 CSNK1G3Q9Y6M4 447 aa6.15□□□□□ -1.42
CNOT1-204ENST00000563130 ARID1BQ8NFD5 2236 aaPredicted RBP6.15□□□□□ -1.42
CNOT1-204ENST00000563130 CNOT1A5YKK6 2376 aaKnown RBP6.15□□□□□ -1.42
CNOT1-204ENST00000563130 GOLGA6CA6NDK9 693 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 GOLGA6BA6NDN3 693 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 PDE2AO00408 941 aaPredicted RBP6.15□□□□□ -1.43
CNOT1-204ENST00000563130 GIPC1O14908 333 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 SCAMP1O15126 338 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 PSMD3O43242 534 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 SDC3O75056 442 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 PPFIA2O75334 1257 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 CEACAM5P06731 702 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 ZSCAN5DPP0CG00 497 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 GOLGA6DP0CG33 693 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 BPIP17213 487 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 KELP23276 732 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 ACTN2P35609 894 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 FDFT1P37268 417 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 TNNT3P45378 269 aaPredicted RBP6.15□□□□□ -1.43
CNOT1-204ENST00000563130 GPR1P46091 355 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 BLKP51451 505 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 PPARDQ03181 441 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 SPARCL1Q14515 664 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 PDPK2PQ6A1A2 396 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 RAET1GQ6H3X3 334 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 ENPP7Q6UWV6 458 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 C4orf22Q6V702 233 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 PHACTR4Q8IZ21 702 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 RBFAQ8N0V3 343 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 C17orf53Q8N3J3 647 aaPredicted RBP6.15□□□□□ -1.43
CNOT1-204ENST00000563130 TRAM1L1Q8N609 369 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 CCDC89Q8N998 374 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 ZNF548Q8NEK5 533 aaPredicted RBP6.15□□□□□ -1.43
CNOT1-204ENST00000563130 DEFB124Q8NES8 71 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 OR56A4Q8NGH8 313 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 BRSK1Q8TDC3 778 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 BLOC1S5Q8TDH9 187 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 BTN2A2Q8WVV5 523 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 OR1E3Q8WZA6 343 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 PDXPQ96GD0 296 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 SCARF2Q96GP6 870 aaPredicted RBP6.15□□□□□ -1.43
CNOT1-204ENST00000563130 NAPGQ99747 312 aaPredicted RBP6.15□□□□□ -1.43
CNOT1-204ENST00000563130 ZSCAN5AQ9BUG6 496 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 LRRC61Q9BV99 259 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 AP1M1Q9BXS5 423 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 SLC32A1Q9H598 525 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 PHPT1Q9NRX4 125 aaPredicted RBP6.15□□□□□ -1.43
CNOT1-204ENST00000563130 RAD18Q9NS91 495 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 GOLGA6AQ9NYA3 693 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 SAR1BQ9Y6B6 198 aa6.15□□□□□ -1.43
CNOT1-204ENST00000563130 COL5A1P20908 1838 aaPredicted RBP6.15□□□□□ -1.43
CNOT1-204ENST00000563130 CACNA1AO00555 2505 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 SCN8AQ9UQD0 1980 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 LRP4O75096 1905 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 H3BM21 787 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 TRIM38O00635 465 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 GAPDHSO14556 408 aaPredicted RBP6.14□□□□□ -1.43
CNOT1-204ENST00000563130 TPP1O14773 563 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 LDB2O43679 373 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 DKK1O94907 266 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 PSMA3P25788 255 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 COILP38432 576 aaPredicted RBP6.14□□□□□ -1.43
CNOT1-204ENST00000563130 FNTAP49354 379 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 NOVA1P51513 510 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms