RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 ALS2CLQ60I27 953 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 NAPEPLDQ6IQ20 393 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 ANO7Q6IWH7 933 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 ESRP1Q6NXG1 681 aaKnown RBP5.22□□□□□ -1.57
SPG11-220ENST00000559933 LRRC8BQ6P9F7 803 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 TRMT10BQ6PF06 316 aaKnown RBP5.22□□□□□ -1.57
SPG11-220ENST00000559933 OGFOD3Q6PK18 319 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 TSSK4Q6SA08 328 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 CRTC1Q6UUV9 634 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 RANBP10Q6VN20 620 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 UNC5AQ6ZN44 842 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 GLT6D1Q7Z4J2 308 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 PCGF5Q86SE9 256 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 LDB1Q86U70 411 aaPredicted RBP5.22□□□□□ -1.57
SPG11-220ENST00000559933 HOOK3Q86VS8 718 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 SUGP1Q8IWZ8 645 aaKnown RBP5.22□□□□□ -1.57
SPG11-220ENST00000559933 SHISA5Q8N114 240 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 PELI3Q8N2H9 469 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 TTC30BQ8N4P2 665 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 MCUQ8NE86 351 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 PJA1Q8NG27 643 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 OR2T3Q8NH03 318 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 UBLCP1Q8WVY7 318 aaPredicted RBP5.22□□□□□ -1.57
SPG11-220ENST00000559933 RLN3Q8WXF3 142 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 KLK6Q92876 244 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 ISG20Q96AZ6 181 aaKnown RBP5.22□□□□□ -1.57
SPG11-220ENST00000559933 ZNF669Q96BR6 464 aaPredicted RBP5.22□□□□□ -1.57
SPG11-220ENST00000559933 ECHDC3Q96DC8 303 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 MRRFQ96E11 262 aaKnown RBP5.22□□□□□ -1.57
SPG11-220ENST00000559933 MFSD3Q96ES6 412 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 WDR89Q96FK6 387 aaPredicted RBP5.22□□□□□ -1.57
SPG11-220ENST00000559933 DNAJC1Q96KC8 554 aaKnown RBP5.22□□□□□ -1.57
SPG11-220ENST00000559933 SIGLEC10Q96LC7 697 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 FCRL3Q96P31 734 aaPredicted RBP5.22□□□□□ -1.57
SPG11-220ENST00000559933 FANCD2OSQ96PS1 177 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 WRAP53Q9BUR4 548 aaKnown RBP5.22□□□□□ -1.57
SPG11-220ENST00000559933 TXLNGYQ9BZA5 131 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 ABCG8Q9H221 673 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 SUDS3Q9H7L9 328 aaPredicted RBP5.22□□□□□ -1.57
SPG11-220ENST00000559933 CAAP1Q9H8G2 361 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 UGT1A7Q9HAW7 530 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 UGT1A10Q9HAW8 530 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 UGT1A8Q9HAW9 530 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 SMYD2Q9NRG4 433 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 VPS45Q9NRW7 570 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 ZNF446Q9NWS9 450 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 CD84Q9UIB8 345 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 PPM1HQ9ULR3 514 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 INVSQ9Y283 1065 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 AAR2Q9Y312 384 aaKnown RBP5.22□□□□□ -1.57
SPG11-220ENST00000559933 ZNF711Q9Y462 761 aa5.22□□□□□ -1.57
SPG11-220ENST00000559933 LRRK1Q38SD2 2015 aa5.21□□□□□ -1.57
SPG11-220ENST00000559933 A0A0J9YYE9 177 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 C1orf232A0A0U1RR37 186 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.21□□□□□ -1.58
SPG11-220ENST00000559933 TSPAN11A1L157 253 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 SMIM23A6NLE4 172 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 CXorf49A8MYA2 514 aaPredicted RBP5.21□□□□□ -1.58
SPG11-220ENST00000559933 UPK3BL1B0FP48 263 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 UPK3BL2E5RIL1 263 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 MAN2B1O00754 1011 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 GAPDHSO14556 408 aaPredicted RBP5.21□□□□□ -1.58
SPG11-220ENST00000559933 GIPC1O14908 333 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 TIMM44O43615 452 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 LDB2O43679 373 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 SOCS5O75159 536 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 PPFIA2O75334 1257 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 RNASEH2AO75792 299 aaKnown RBP5.21□□□□□ -1.58
SPG11-220ENST00000559933 FAM155BO75949 473 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 POP4O95707 220 aaKnown RBP5.21□□□□□ -1.58
SPG11-220ENST00000559933 TRBC1P01850 177 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 PRNPP04156 253 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 FGF1P05230 155 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 ERVK-10P10266 1014 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 ADRB3P13945 408 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 GM2AP17900 193 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 HLA-DPA1P20036 260 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 NME2P22392 152 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 ARNTP27540 789 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 HSD17B3P37058 310 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 MAGEA4P43358 317 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 CSNK1DP48730 415 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 CDKN1CP49918 316 aaPredicted RBP5.21□□□□□ -1.58
SPG11-220ENST00000559933 ZNF140P52738 457 aaPredicted RBP5.21□□□□□ -1.58
SPG11-220ENST00000559933 PGGT1BP53609 377 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 PMS2P54278 862 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 TAS2R38P59533 333 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 PPP2CBP62714 309 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 PPP2CAP67775 309 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 FAM193AP78312 1265 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 CAV1Q03135 178 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 PPARDQ03181 441 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 CDH17Q12864 832 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 RALGDSQ12967 914 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 MTAPQ13126 283 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 SEMA3AQ14563 771 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 CRYMQ14894 314 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 CNGA3Q16281 694 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 CRY1Q16526 586 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 CDKN3Q16667 212 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms