RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 SUV39H1O43463 412 aa13.91□□□□□ -0.18
SPG11-210ENST00000558319 UGT2B11O75310 529 aa13.91□□□□□ -0.18
SPG11-210ENST00000558319 MATN4O95460 622 aa13.91□□□□□ -0.18
SPG11-210ENST00000558319 TRUB2O95900 331 aaKnown RBP13.91□□□□□ -0.18
SPG11-210ENST00000558319 PRH1P02810 166 aa13.91□□□□□ -0.18
SPG11-210ENST00000558319 ITGA2BP08514 1039 aa13.91□□□□□ -0.18
SPG11-210ENST00000558319 MC4RP32245 332 aa13.91□□□□□ -0.18
SPG11-210ENST00000558319 CCNFP41002 786 aa13.91□□□□□ -0.18
SPG11-210ENST00000558319 PPP4CP60510 307 aa13.91□□□□□ -0.18
SPG11-210ENST00000558319 POLR2LP62875 67 aaKnown RBP13.91□□□□□ -0.18
SPG11-210ENST00000558319 CDKL1Q00532 357 aa13.91□□□□□ -0.18
SPG11-210ENST00000558319 E2F2Q14209 437 aa13.91□□□□□ -0.18
SPG11-210ENST00000558319 SF1Q15637 639 aaKnown RBP13.91□□□□□ -0.18
SPG11-210ENST00000558319 NOMO2Q5JPE7 1267 aa13.91□□□□□ -0.18
SPG11-210ENST00000558319 GPRIN3Q6ZVF9 776 aa13.91□□□□□ -0.18
SPG11-210ENST00000558319 KCTD8Q6ZWB6 473 aa13.91□□□□□ -0.18
SPG11-210ENST00000558319 RBM15BQ8NDT2 890 aaKnown RBP13.91□□□□□ -0.18
SPG11-210ENST00000558319 OR52J3Q8NH60 311 aa13.91□□□□□ -0.18
SPG11-210ENST00000558319 TSPAN18Q96SJ8 248 aa13.91□□□□□ -0.18
SPG11-210ENST00000558319 AARSD1Q9BTE6 412 aaKnown RBP13.91□□□□□ -0.18
SPG11-210ENST00000558319 C1QTNF7Q9BXJ2 289 aa13.91□□□□□ -0.18
SPG11-210ENST00000558319 INO80Q9ULG1 1556 aaPredicted RBP13.91□□□□□ -0.18
SPG11-210ENST00000558319 SPATA31A6Q5VVP1 1343 aa13.91□□□□□ -0.18
SPG11-210ENST00000558319 HDAC3O15379 428 aa13.91□□□□□ -0.18
SPG11-210ENST00000558319 ATF6P18850 670 aa13.91□□□□□ -0.18
SPG11-210ENST00000558319 TLX1P31314 330 aaPredicted RBP13.91□□□□□ -0.18
SPG11-210ENST00000558319 ICAM3P32942 547 aa13.91□□□□□ -0.18
SPG11-210ENST00000558319 ECT2LQ008S8 904 aa13.91□□□□□ -0.18
SPG11-210ENST00000558319 PTPRNQ16849 979 aa13.91□□□□□ -0.18
SPG11-210ENST00000558319 VWA5B1Q5TIE3 1220 aa13.91□□□□□ -0.18
SPG11-210ENST00000558319 CMC1Q7Z7K0 106 aa13.91□□□□□ -0.18
SPG11-210ENST00000558319 SPERTQ8NA61 448 aa13.91□□□□□ -0.18
SPG11-210ENST00000558319 SLC4A11Q8NBS3 891 aa13.91□□□□□ -0.18
SPG11-210ENST00000558319 ADCY4Q8NFM4 1077 aa13.91□□□□□ -0.18
SPG11-210ENST00000558319 NXF3Q9H4D5 531 aaKnown RBP13.91□□□□□ -0.18
SPG11-210ENST00000558319 CCNB1IP1Q9NPC3 277 aa13.91□□□□□ -0.18
SPG11-210ENST00000558319 PRPF19Q9UMS4 504 aaKnown RBP13.91□□□□□ -0.18
SPG11-210ENST00000558319 TRPM1Q7Z4N2 1603 aa13.91□□□□□ -0.18
SPG11-210ENST00000558319 ERCC6L2Q5T890 1561 aa13.91□□□□□ -0.18
SPG11-210ENST00000558319 KLRG2A4D1S0 409 aaPredicted RBP13.91□□□□□ -0.18
SPG11-210ENST00000558319 CPSF4LA6NMK7 179 aaKnown RBP13.91□□□□□ -0.18
SPG11-210ENST00000558319 SLC28A1O00337 649 aa13.91□□□□□ -0.18
SPG11-210ENST00000558319 CELF3Q5SZQ8 465 aaKnown RBP13.91□□□□□ -0.18
SPG11-210ENST00000558319 ZCCHC10Q8TBK6 192 aa13.91□□□□□ -0.18
SPG11-210ENST00000558319 ITCHQ96J02 903 aa13.91□□□□□ -0.18
SPG11-210ENST00000558319 ACE2Q9BYF1 805 aaPredicted RBP13.91□□□□□ -0.18
SPG11-210ENST00000558319 TNPO3Q9Y5L0 923 aaKnown RBP13.91□□□□□ -0.18
SPG11-210ENST00000558319 SALL1Q9NSC2 1324 aa13.91□□□□□ -0.18
SPG11-210ENST00000558319 C9IYK1 514 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 ERN1O75460 977 aaKnown RBP13.9□□□□□ -0.18
SPG11-210ENST00000558319 SLC6A2P23975 617 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 S100A2P29034 98 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 GJA9P57773 515 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 UGCGQ16739 394 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 SMU1Q2TAY7 513 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 TMPRSS9Q7Z410 1059 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 CHERPQ8IWX8 916 aaKnown RBP13.9□□□□□ -0.18
SPG11-210ENST00000558319 NKD1Q969G9 470 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 SNRNP25Q9BV90 132 aaKnown RBP13.9□□□□□ -0.18
SPG11-210ENST00000558319 PREX2Q70Z35 1606 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 ULK1O75385 1050 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 MLYCDO95822 493 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 PEX2P28328 305 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 RAB27AP51159 221 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 MPP2Q14168 576 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 GPR158Q5T848 1215 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.9□□□□□ -0.18
SPG11-210ENST00000558319 ZSCAN5AQ9BUG6 496 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 NMUR2Q9GZQ4 415 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 SLC6A15Q9H2J7 730 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 EHD1Q9H4M9 534 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 CHMP1AQ9HD42 196 aaPredicted RBP13.9□□□□□ -0.18
SPG11-210ENST00000558319 YDJCA8MPS7 323 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 NOTOA8MTQ0 251 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 OR7A10O76100 309 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 PGRP06401 933 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 CSH1P0DML2 217 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 CSH2P0DML3 217 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 PPIL2Q13356 520 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 NAPRTQ6XQN6 538 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 GPR142Q7Z601 462 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 GALNT15Q8N3T1 639 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 CHST4Q8NCG5 386 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 FAM110BQ8TC76 370 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 OSBPL2Q9H1P3 480 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 EBF3Q9H4W6 596 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 CFAP97Q9P2B7 532 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 KCNU1A8MYU2 1149 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 TBX1O43435 398 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 ACRP10323 421 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 S100GP29377 79 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 CBX5P45973 191 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 AQP4P55087 323 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 OTOP3Q7RTS5 596 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 TMPRSS11BQ86T26 416 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 CADM2Q8N3J6 435 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 OR14C36Q8NHC7 312 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 ZNF398Q8TD17 642 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 PPM1MQ96MI6 270 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 UNC13BO14795 1591 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms