RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 ZNF470Q6ECI4 717 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 LCN8Q6JVE9 175 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 DEFB128Q7Z7B8 93 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 PLD3Q8IV08 490 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 OR6B3Q8NGW1 331 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 NDRG1Q92597 394 aaKnown RBP5.05□□□□□ -1.6
HMG20A-204ENST00000558288 TUBGCP3Q96CW5 907 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 LRRC58Q96CX6 371 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 CLIP3Q96DZ5 547 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 C19orf60Q96EN9 201 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 ZNF486Q96H40 463 aaPredicted RBP5.05□□□□□ -1.6
HMG20A-204ENST00000558288 ZBED2Q9BTP6 218 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 OSBPL10Q9BXB5 764 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 AP5M1Q9H0R1 490 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 CYP3A43Q9HB55 503 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 NEK6Q9HC98 313 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 LTB4R2Q9NPC1 389 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 AKIP1Q9NQ31 210 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 C8orf4Q9NR00 106 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 FLRT1Q9NZU1 646 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 GMIPQ9P107 970 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 TBC1D14Q9P2M4 693 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 MAGEB16A2A368 324 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 TRIM64BA6NI03 449 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 A8MT66 165 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 BBIP1A8MTZ0 92 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 H3BMM5 538 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 RAD51BO15315 384 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 TBX1O43435 398 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 NOBOXO60393 691 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 SNX2O60749 519 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 STAG3L1P0CL83 205 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 JUNBP17275 347 aaPredicted RBP5.05□□□□□ -1.6
HMG20A-204ENST00000558288 CAPN3P20807 821 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 CRHBPP24387 322 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 PSMB9P28065 219 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 AXLP30530 894 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 GLUD2P49448 558 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 GSK3BP49841 420 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 YBX1P67809 324 aaKnown RBP5.05□□□□□ -1.6
HMG20A-204ENST00000558288 PHC1P78364 1004 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 ADARB1P78563 741 aaKnown RBP5.05□□□□□ -1.6
HMG20A-204ENST00000558288 ILF2Q12905 390 aaKnown RBP5.05□□□□□ -1.6
HMG20A-204ENST00000558288 CAMK2BQ13554 666 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 AASDHQ4L235 1098 aaPredicted RBP5.05□□□□□ -1.6
HMG20A-204ENST00000558288 UBE2UQ5VVX9 321 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 PPP2R2DQ66LE6 453 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 FUNDC1Q8IVP5 155 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 LILRB4Q8NHJ6 448 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 SLC7A14Q8TBB6 771 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 LPAR1Q92633 364 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 KHSRPQ92945 711 aaKnown RBP eCLIP5.05□□□□□ -1.6
HMG20A-204ENST00000558288 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.05□□□□□ -1.6
HMG20A-204ENST00000558288 VPS33AQ96AX1 596 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 C3orf30Q96M34 536 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 TMEM74Q96NL1 305 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 NODALQ96S42 347 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 TSPAN18Q96SJ8 248 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 SLC30A3Q99726 388 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 CDT1Q9H211 546 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 AKTIPQ9H8T0 292 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 SLC28A3Q9HAS3 691 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 CNGB3Q9NQW8 809 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 SETD4Q9NVD3 440 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.05□□□□□ -1.66e-7■■■□□ 18.8
HMG20A-204ENST00000558288 MAP10Q9P2G4 905 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 ENPP5Q9UJA9 477 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 PCDHB3Q9Y5E6 796 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 SPO11Q9Y5K1 396 aa5.05□□□□□ -1.6
HMG20A-204ENST00000558288 PTPRZ1P23471 2315 aaPredicted RBP5.04□□□□□ -1.6
HMG20A-204ENST00000558288 H0YAE9 185 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 EIF3FO00303 357 aaPredicted RBP5.04□□□□□ -1.6
HMG20A-204ENST00000558288 NUAK1O60285 661 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 GABBR2O75899 941 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 ALDOCP09972 364 aaKnown RBP5.04□□□□□ -1.6
HMG20A-204ENST00000558288 CDH1P12830 882 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 HSD17B1P14061 328 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 AGXTP21549 392 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 SLC6A2P23975 617 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 NPY2RP49146 381 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 ARSFP54793 590 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 KCNK10P57789 538 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 BEX3Q00994 111 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 PLIN5Q00G26 463 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 VAC14Q08AM6 782 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 TMEM132DQ14C87 1099 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 RBM48Q5RL73 367 aaKnown RBP5.04□□□□□ -1.6
HMG20A-204ENST00000558288 AGAP9Q5VTM2 703 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 GTF2IRD2BQ6EKJ0 949 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 XRRA1Q6P2D8 792 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 HACD2Q6Y1H2 254 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 USP43Q70EL4 1123 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 PDZD4Q76G19 769 aaPredicted RBP5.04□□□□□ -1.6
HMG20A-204ENST00000558288 GTF2IRD2Q86UP8 949 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 ZDHHC13Q8IUH4 622 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 LGI2Q8N0V4 545 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 DEFB106AQ8N104 65 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 IPMKQ8NFU5 416 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 TRAPPC12Q8WVT3 735 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 RORBQ92753 470 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms