RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 ASTE1Q2TB18 679 aaPredicted RBP14.52□□□□□ -0.09
SHMT2-235ENST00000557740 HENMT1Q5T8I9 393 aaKnown RBP14.52□□□□□ -0.09
SHMT2-235ENST00000557740 VSIG1Q86XK7 387 aa14.52□□□□□ -0.09
SHMT2-235ENST00000557740 PLD5Q8N7P1 536 aa14.52□□□□□ -0.09
SHMT2-235ENST00000557740 OR4D9Q8NGE8 314 aa14.52□□□□□ -0.09
SHMT2-235ENST00000557740 OR10G6Q8NH81 332 aa14.52□□□□□ -0.09
SHMT2-235ENST00000557740 SLC35G2Q8TBE7 412 aa14.52□□□□□ -0.09
SHMT2-235ENST00000557740 SLC37A2Q8TED4 501 aa14.52□□□□□ -0.09
SHMT2-235ENST00000557740 SGF29Q96ES7 293 aa14.52□□□□□ -0.09
SHMT2-235ENST00000557740 AHCYL2Q96HN2 611 aaKnown RBP14.52□□□□□ -0.09
SHMT2-235ENST00000557740 MAK16Q9BXY0 300 aaKnown RBP14.52□□□□□ -0.09
SHMT2-235ENST00000557740 B3GNT4Q9C0J1 378 aa14.52□□□□□ -0.09
SHMT2-235ENST00000557740 COL6A6A6NMZ7 2263 aa14.52□□□□□ -0.09
SHMT2-235ENST00000557740 RGSL1A5PLK6 1076 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 ANKRD66B4E2M5 251 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 C9orf172C9J069 976 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 PPP1R12AO14974 1030 aaPredicted RBP14.51□□□□□ -0.09
SHMT2-235ENST00000557740 EFSO43281 561 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 DUX1O43812 170 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 DNAJC6O75061 913 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 SLC4A1P02730 911 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 MMP2P08253 660 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 CCL4P13236 92 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 SLC2A4P14672 509 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 ZFXP17010 805 aaPredicted RBP14.51□□□□□ -0.09
SHMT2-235ENST00000557740 CSF2RBP32927 897 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 CSTF2P33240 577 aaKnown RBP eCLIP14.51□□□□□ -0.09
SHMT2-235ENST00000557740 ARHGAP25P42331 645 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 FASLGP48023 281 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 LIMK2P53671 638 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 GPLD1P80108 840 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 GALNT3Q14435 633 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 PDK1Q15118 436 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 ZNF569Q5MCW4 686 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 SLC9A4Q6AI14 798 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 ZNF574Q6ZN55 896 aaPredicted RBP14.51□□□□□ -0.09
SHMT2-235ENST00000557740 CHST15Q7LFX5 561 aaPredicted RBP14.51□□□□□ -0.09
SHMT2-235ENST00000557740 LYSMD3Q7Z3D4 306 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 VASH2Q86V25 355 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 ZNF761Q86XN6 746 aaPredicted RBP14.51□□□□□ -0.09
SHMT2-235ENST00000557740 RFX6Q8HWS3 928 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 RHOT2Q8IXI1 618 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 SFRP1Q8N474 314 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 ZSCAN1Q8NBB4 408 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 AGBL5Q8NDL9 886 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 MED8Q96G25 268 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 CCDC42Q96M95 316 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 SLC38A3Q99624 504 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 SPATA16Q9BXB7 569 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 CEP41Q9BYV8 373 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 SEMA4CQ9C0C4 833 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 RMI1Q9H9A7 625 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 ABHD10Q9NUJ1 306 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 SPTLC3Q9NUV7 552 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 PRKAB1Q9Y478 270 aa14.51□□□□□ -0.09
SHMT2-235ENST00000557740 OAS3Q9Y6K5 1087 aaKnown RBP14.51□□□□□ -0.09
SHMT2-235ENST00000557740 TRBV23OR9-2A0A075B6M9 112 aa14.5□□□□□ -0.09
SHMT2-235ENST00000557740 FADS2P1A8MWK0 482 aa14.5□□□□□ -0.09
SHMT2-235ENST00000557740 STMND1H3BQB6 276 aa14.5□□□□□ -0.09
SHMT2-235ENST00000557740 THRAP10827 490 aa14.5□□□□□ -0.09
SHMT2-235ENST00000557740 ACP5P13686 325 aa14.5□□□□□ -0.09
SHMT2-235ENST00000557740 MPSTP25325 297 aa14.5□□□□□ -0.09
SHMT2-235ENST00000557740 ATP1A2P50993 1020 aa14.5□□□□□ -0.09
SHMT2-235ENST00000557740 DYNLT1P63172 113 aa14.5□□□□□ -0.09
SHMT2-235ENST00000557740 HHEXQ03014 270 aa14.5□□□□□ -0.09
SHMT2-235ENST00000557740 SRSF6Q13247 344 aaKnown RBP14.5□□□□□ -0.09
SHMT2-235ENST00000557740 KDELC2Q7Z4H8 507 aa14.5□□□□□ -0.09
SHMT2-235ENST00000557740 PHYKPLQ8IUZ5 450 aa14.5□□□□□ -0.09
SHMT2-235ENST00000557740 VSTM4Q8IW00 320 aa14.5□□□□□ -0.09
SHMT2-235ENST00000557740 CNTD1Q8N815 330 aa14.5□□□□□ -0.09
SHMT2-235ENST00000557740 TAAR9Q96RI9 348 aa14.5□□□□□ -0.09
SHMT2-235ENST00000557740 WDR24Q96S15 920 aa14.5□□□□□ -0.09
SHMT2-235ENST00000557740 HERPUD2Q9BSE4 406 aa14.5□□□□□ -0.09
SHMT2-235ENST00000557740 NHEJ1Q9H9Q4 299 aaPredicted RBP14.5□□□□□ -0.09
SHMT2-235ENST00000557740 ZFYVE1Q9HBF4 777 aa14.5□□□□□ -0.09
SHMT2-235ENST00000557740 CNOT6Q9ULM6 557 aaKnown RBP14.5□□□□□ -0.09
SHMT2-235ENST00000557740 KCNK6Q9Y257 313 aa14.5□□□□□ -0.09
SHMT2-235ENST00000557740 SPTA1P02549 2419 aa14.5□□□□□ -0.09
SHMT2-235ENST00000557740 ATMQ13315 3056 aa14.49□□□□□ -0.09
SHMT2-235ENST00000557740 C3orf70A6NLC5 250 aaPredicted RBP14.49□□□□□ -0.09
SHMT2-235ENST00000557740 SNX2O60749 519 aa14.49□□□□□ -0.09
SHMT2-235ENST00000557740 MFAP3LO75121 409 aa14.49□□□□□ -0.09
SHMT2-235ENST00000557740 MTA2O94776 668 aa14.49□□□□□ -0.09
SHMT2-235ENST00000557740 TNNT1P13805 278 aa14.49□□□□□ -0.09
SHMT2-235ENST00000557740 NFATC2Q13469 925 aa14.49□□□□□ -0.09
SHMT2-235ENST00000557740 SQSTM1Q13501 440 aa14.49□□□□□ -0.09
SHMT2-235ENST00000557740 PCSK7Q16549 785 aa14.49□□□□□ -0.09
SHMT2-235ENST00000557740 SKOR2Q2VWA4 1001 aaPredicted RBP14.49□□□□□ -0.09
SHMT2-235ENST00000557740 LRRC38Q5VT99 294 aa14.49□□□□□ -0.09
SHMT2-235ENST00000557740 ALS2CLQ60I27 953 aa14.49□□□□□ -0.09
SHMT2-235ENST00000557740 NPNTQ6UXI9 565 aa14.49□□□□□ -0.09
SHMT2-235ENST00000557740 SLC9B2Q86UD5 537 aa14.49□□□□□ -0.09
SHMT2-235ENST00000557740 NT5DC3Q86UY8 548 aa14.49□□□□□ -0.09
SHMT2-235ENST00000557740 FAM129CQ86XR2 697 aa14.49□□□□□ -0.09
SHMT2-235ENST00000557740 DTX1Q86Y01 620 aa14.49□□□□□ -0.09
SHMT2-235ENST00000557740 AVL9Q8NBF6 648 aa14.49□□□□□ -0.09
SHMT2-235ENST00000557740 ART4Q93070 314 aa14.49□□□□□ -0.09
SHMT2-235ENST00000557740 SH3KBP1Q96B97 665 aa14.49□□□□□ -0.09
SHMT2-235ENST00000557740 IMP4Q96G21 291 aaKnown RBP14.49□□□□□ -0.09
SHMT2-235ENST00000557740 AGAP3Q96P47 875 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms