RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 C1orf74Q96LT6 269 aa15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 PDP2Q9P2J9 529 aa15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 PRPF19Q9UMS4 504 aaKnown RBP15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 NUP214P35658 2090 aaPredicted RBP15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 PDLIM1O00151 329 aa15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 NPHS1O60500 1241 aa15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 ECI2O75521 394 aa15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 CDK14O94921 469 aa15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 MTHFD1P11586 935 aaKnown RBP15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 XPAP23025 273 aaPredicted RBP15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 BOP1Q14137 746 aaKnown RBP15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 NPAS4Q8IUM7 802 aa15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 ZNF786Q8N393 782 aa15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 GFM2Q969S9 779 aaKnown RBP15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 SLC39A13Q96H72 371 aa15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 LRCH3Q96II8 777 aa15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 TLR9Q9NR96 1032 aa15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 PLXNA1Q9UIW2 1896 aa15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 HSPA7P48741 367 aa15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 KPNA1P52294 538 aaPredicted RBP15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 ZNF678Q5SXM1 525 aa15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 LYSMD3Q7Z3D4 306 aa15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 MYLIPQ8WY64 445 aa15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 YME1L1Q96TA2 773 aa15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 RNF38Q9H0F5 515 aa15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 CPQQ9Y646 472 aa15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 MAP3K13O43283 966 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 CLDN11O75508 207 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 ZNF37AP17032 561 aaPredicted RBP15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 ATF6P18850 670 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 MAPK10P53779 464 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 HERVK_113P63132 956 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 GK3PQ14409 553 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 UNC50Q53HI1 259 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 SATL1Q86VE3 508 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 CACUL1Q86Y37 369 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 LRRC43Q8N309 656 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 NAT16Q8N8M0 369 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 CANT1Q8WVQ1 401 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 GPR78Q96P69 363 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 CCT7Q99832 543 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 CCDC28BQ9BUN5 200 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 ERVK-6Q9BXR3 956 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 CIPCQ9C0C6 399 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 KLQ9UEF7 1012 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 CD84Q9UIB8 345 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 TCAF2A6NFQ2 919 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 SYCE1LA8MT33 242 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 OR6B1O95007 311 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 IGLV3-25P01717 112 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 DPP6P42658 865 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 ZNF33AQ06730 810 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 PPP1R8Q12972 351 aaKnown RBP15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 CPSF6Q16630 551 aaKnown RBP eCLIP15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 ZNF549Q6P9A3 640 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 AFTPHQ6ULP2 937 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 NUDT8Q8WV74 236 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 TMEM74Q96NL1 305 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 CACNA2D2Q9NY47 1150 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 LSM7Q9UK45 103 aaKnown RBP15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 DNAJC15Q9Y5T4 150 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 KANSL1LA0AUZ9 987 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 UBFD1O14562 309 aaKnown RBP15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 KLKB1P03952 638 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 ZNF23P17027 643 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 STC1P52823 247 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 BCL2L1Q07817 233 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 DSC1Q08554 894 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 LAMB3Q13751 1172 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 RABL3Q5HYI8 236 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 OTOP2Q7RTS6 562 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 DNAJB7Q7Z6W7 309 aaPredicted RBP15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 SLC22A12Q96S37 553 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 BEGAINQ9BUH8 593 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 MAGEH1Q9H213 219 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 GID8Q9NWU2 228 aa15.25■□□□□ 0.03
TMEM55B-207ENST00000557041 CCDC154A6NI56 674 aa15.24■□□□□ 0.03
TMEM55B-207ENST00000557041 ANKRD66B4E2M5 251 aa15.24■□□□□ 0.03
TMEM55B-207ENST00000557041 MTX2O75431 263 aa15.24■□□□□ 0.03
TMEM55B-207ENST00000557041 EPHB3P54753 998 aa15.24■□□□□ 0.03
TMEM55B-207ENST00000557041 ZIK1Q3SY52 487 aaPredicted RBP15.24■□□□□ 0.03
TMEM55B-207ENST00000557041 ATP6AP1LQ52LC2 224 aa15.24■□□□□ 0.03
TMEM55B-207ENST00000557041 SAMD4BQ5PRF9 694 aaKnown RBP15.24■□□□□ 0.03
TMEM55B-207ENST00000557041 MANEALQ5VSG8 457 aa15.24■□□□□ 0.03
TMEM55B-207ENST00000557041 ANGPTL8Q6UXH0 198 aa15.24■□□□□ 0.03
TMEM55B-207ENST00000557041 PHC3Q8NDX5 983 aa15.24■□□□□ 0.03
TMEM55B-207ENST00000557041 MRPS31Q92665 395 aaKnown RBP15.24■□□□□ 0.03
TMEM55B-207ENST00000557041 WBP2Q969T9 261 aa15.24■□□□□ 0.03
TMEM55B-207ENST00000557041 FEM1CQ96JP0 617 aa15.24■□□□□ 0.03
TMEM55B-207ENST00000557041 RNF145Q96MT1 663 aa15.24■□□□□ 0.03
TMEM55B-207ENST00000557041 CORO1BQ9BR76 489 aa15.24■□□□□ 0.03
TMEM55B-207ENST00000557041 COQ10BQ9H8M1 238 aa15.24■□□□□ 0.03
TMEM55B-207ENST00000557041 A0A1B0GVM2 712 aa15.24■□□□□ 0.03
TMEM55B-207ENST00000557041 PRORSD1PA6NEY8 169 aa15.24■□□□□ 0.03
TMEM55B-207ENST00000557041 KIF1CO43896 1103 aaKnown RBP15.24■□□□□ 0.03
TMEM55B-207ENST00000557041 RNASEH2AO75792 299 aaKnown RBP15.24■□□□□ 0.03
TMEM55B-207ENST00000557041 PRAMEF1O95521 474 aa15.24■□□□□ 0.03
TMEM55B-207ENST00000557041 ACRP10323 421 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms