RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 UBASH3BQ8TF42 649 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 ST8SIA2Q92186 375 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 EFHD2Q96C19 240 aaPredicted RBP8.54□□□□□ -1.04
MARK3-210ENST00000556463 EFHD1Q9BUP0 239 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 ACTR3BQ9P1U1 418 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 SFMBT1Q9UHJ3 866 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 ZNF221Q9UK13 617 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 VANGL2Q9ULK5 521 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 VPS4AQ9UN37 437 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 EP400Q96L91 3159 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 LOC105371267A0A1B0GV96 52 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 FXYD1O00168 92 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 B4GALT5O43286 388 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 ARHGEF15O94989 841 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 APOA1P02647 267 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 GSNP06396 782 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 SNRPB2P08579 225 aaKnown RBP8.54□□□□□ -1.04
MARK3-210ENST00000556463 MBL2P11226 248 aaPredicted RBP8.54□□□□□ -1.04
MARK3-210ENST00000556463 PCNAP12004 261 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 STMN1P16949 149 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 GPX3P22352 226 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 EDNRBP24530 442 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 PTPN3P26045 913 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 LRPAP1P30533 357 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 MRPL19P49406 292 aaKnown RBP8.54□□□□□ -1.04
MARK3-210ENST00000556463 APLP1P51693 650 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 TNFAIP2Q03169 654 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 ZNF846Q147U1 533 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 GOLGA7BQ2TAP0 167 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 LYPD8Q6UX82 237 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 PAGE2Q7Z2X7 111 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 PIWIL4Q7Z3Z4 852 aaKnown RBP8.54□□□□□ -1.04
MARK3-210ENST00000556463 RETREG3Q86VR2 466 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 KCNMB4Q86W47 210 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 CMTR2Q8IYT2 770 aaKnown RBP8.54□□□□□ -1.04
MARK3-210ENST00000556463 CACTIN-AS1Q8N1I8 211 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 MINDY1Q8N5J2 469 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 CDC26Q8NHZ8 85 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 PCNPQ8WW12 178 aaKnown RBP8.54□□□□□ -1.04
MARK3-210ENST00000556463 TRIM63Q969Q1 353 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 VPS33AQ96AX1 596 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 CENPNQ96H22 339 aaPredicted RBP8.54□□□□□ -1.04
MARK3-210ENST00000556463 ZNF560Q96MR9 790 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 UQCC2Q9BRT2 126 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 NT5C1AQ9BXI3 368 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 RHOBTB2Q9BYZ6 727 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 NRBP2Q9NSY0 501 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 NSMCE4AQ9NXX6 385 aa8.54□□□□□ -1.04
MARK3-210ENST00000556463 TYW5A2RUC4 315 aaKnown RBP8.53□□□□□ -1.04
MARK3-210ENST00000556463 NRP1O14786 923 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 RGS5O15539 181 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 NRP2O60462 931 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 TSPAN1O60635 241 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 RSL1D1O76021 490 aaKnown RBP8.53□□□□□ -1.04
MARK3-210ENST00000556463 WISP3O95389 354 aaPredicted RBP8.53□□□□□ -1.04
MARK3-210ENST00000556463 MT-CO1P00395 513 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 F7P08709 466 aaPredicted RBP8.53□□□□□ -1.04
MARK3-210ENST00000556463 NPY2RP49146 381 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 GTF2A2P52657 109 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 PIGFQ07326 219 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 SEMA3BQ13214 749 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 DSC3Q14574 896 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 COL19A1Q14993 1142 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 ABRAXAS1Q6UWZ7 409 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 PTRH1Q86Y79 214 aaKnown RBP8.53□□□□□ -1.04
MARK3-210ENST00000556463 LRRC49Q8IUZ0 686 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 SNX31Q8N9S9 440 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 TXNDC5Q8NBS9 432 aaKnown RBP8.53□□□□□ -1.04
MARK3-210ENST00000556463 ZNF669Q96BR6 464 aaPredicted RBP8.53□□□□□ -1.04
MARK3-210ENST00000556463 HPDLQ96IR7 371 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 C12orf42Q96LP6 360 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 ALPK1Q96QP1 1244 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 SLC25A23Q9BV35 468 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 B3GNT5Q9BYG0 378 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 TASP1Q9H6P5 420 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 KRT87PA6NCN2 255 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 H0YAE9 185 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 NME4O00746 187 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 JRKO75564 520 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 CLPXO76031 633 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 PRSS23O95084 383 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 HDCP19113 662 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 UBA1P22314 1058 aaKnown RBP8.53□□□□□ -1.04
MARK3-210ENST00000556463 UQCRC1P31930 480 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 CAPGP40121 348 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 SNRPD2P62316 118 aaKnown RBP8.53□□□□□ -1.04
MARK3-210ENST00000556463 POU5F1BQ06416 359 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 TMEM132BQ14DG7 1078 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 SNX17Q15036 470 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 SLC14A2Q15849 920 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 IMPG1Q17R60 797 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 SLC10A6Q3KNW5 377 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 INAVAQ3KP66 663 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 UGT3A2Q3SY77 523 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 BROXQ5VW32 411 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 UGT3A1Q6NUS8 523 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 SPATC1Q76KD6 591 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 CEP97Q8IW35 865 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 UBE2J2Q8N2K1 259 aa8.53□□□□□ -1.04
MARK3-210ENST00000556463 DNERQ8NFT8 737 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms