RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 OVGP1Q12889 678 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 ILF2Q12905 390 aaKnown RBP12.38□□□□□ -0.43
SHMT2-221ENST00000555773 SRSF5Q13243 272 aaKnown RBP12.38□□□□□ -0.43
SHMT2-221ENST00000555773 IRF4Q15306 451 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 ATP13A5Q4VNC0 1218 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 LDLRAP1Q5SW96 308 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 LYSMD4Q5XG99 296 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 TAS2R42Q7RTR8 314 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 PTAR1Q7Z6K3 402 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-221ENST00000555773 ABI3BPQ7Z7G0 1075 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 IQCHQ86VS3 1027 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 KCNMB4Q86W47 210 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 DCP2Q8IU60 420 aaKnown RBP12.38□□□□□ -0.43
SHMT2-221ENST00000555773 RGL4Q8IZJ4 473 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 PLA2G15Q8NCC3 412 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 SNX19Q92543 992 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 CDKL2Q92772 493 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 GLYATL1Q969I3 302 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 HIC2Q96JB3 615 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 LOXL4Q96JB6 756 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 BMFQ96LC9 184 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 AGAP2Q99490 1192 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 FAM167BQ9BTA0 163 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 APOOQ9BUR5 198 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 TEX101Q9BY14 249 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 UGT1A7Q9HAW7 530 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 UGT1A10Q9HAW8 530 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 UGT1A8Q9HAW9 530 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 CATSPERZQ9NTU4 200 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 EIF2B4Q9UI10 523 aaKnown RBP12.38□□□□□ -0.43
SHMT2-221ENST00000555773 CRLS1Q9UJA2 301 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 CNOT6Q9ULM6 557 aaKnown RBP12.38□□□□□ -0.43
SHMT2-221ENST00000555773 ANKRD36A6QL64 1941 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 CACNA1HO95180 2353 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 TCRBV9S1A1TA0A576 114 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 A6NNZ2 444 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 FADS2P1A8MWK0 482 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 PRR5-ARHGAP8B1AHC4 643 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 K7ESM1 405 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 RIPK2O43353 540 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 MAGEC1O60732 1142 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 SLC25A14O95258 325 aaPredicted RBP12.37□□□□□ -0.43
SHMT2-221ENST00000555773 SOD1P00441 154 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 ABHD2P08910 425 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 ERVK-10P10266 1014 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 GNSP15586 552 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 OGNP20774 298 aaKnown RBP12.37□□□□□ -0.43
SHMT2-221ENST00000555773 PMLP29590 882 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 HOXD12P35452 270 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 IGFALSP35858 605 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 PTGER3P43115 390 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 RABIFP47224 123 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 DHPSP49366 369 aaPredicted RBP12.37□□□□□ -0.43
SHMT2-221ENST00000555773 TTPAP49638 278 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 PFN3P60673 137 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 HSP90AA5PQ58FG0 334 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 TEDDM1Q5T9Z0 273 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 KYAT3Q6YP21 454 aaKnown RBP12.37□□□□□ -0.43
SHMT2-221ENST00000555773 KIAA0408Q6ZU52 694 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 PHYKPLQ8IUZ5 450 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 CNTN4Q8IWV2 1026 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 MREGQ8N565 214 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 MFSD2AQ8NA29 543 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 C1orf216Q8TAB5 229 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 SKA1Q96BD8 255 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 CYTH2Q99418 400 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 CCDC77Q9BR77 488 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 WDR26Q9H7D7 661 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 TRIM39Q9HCM9 518 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 FZD3Q9NPG1 666 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 PPANQ9NQ55 473 aaKnown RBP12.37□□□□□ -0.43
SHMT2-221ENST00000555773 AASDHPPTQ9NRN7 309 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 PHPT1Q9NRX4 125 aaPredicted RBP12.37□□□□□ -0.43
SHMT2-221ENST00000555773 NSMCE4AQ9NXX6 385 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 SUSD2Q9UGT4 822 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 VPS9D1Q9Y2B5 631 aa12.37□□□□□ -0.43
SHMT2-221ENST00000555773 A0A087WUV0 522 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-221ENST00000555773 POM121BA6NF01 834 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 OR51F1A6NGY5 319 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 FAM159BA6NKW6 160 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 CACNB4O00305 520 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-221ENST00000555773 ACSL3O95573 720 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 RALBP11234 206 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 KELP23276 732 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 MAOBP27338 520 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 HTR1BP28222 390 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 CD38P28907 300 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 CLDN2P57739 230 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 CDK3Q00526 305 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 NAB1Q13506 487 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 PTK2BQ14289 1009 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 ITIH4Q14624 930 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 RNF187Q5TA31 235 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-221ENST00000555773 TRMT10BQ6PF06 316 aaKnown RBP12.36□□□□□ -0.43
SHMT2-221ENST00000555773 GCNT7Q6ZNI0 430 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 CAPN12Q6ZSI9 719 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 Q6ZSR6 202 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 RABEPKQ7Z6M1 372 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 GALNT7Q86SF2 657 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 SLC26A11Q86WA9 606 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms