RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 HGFP14210 728 aa13.7□□□□□ -0.22
PCNX4-209ENST00000555569 PTPN3P26045 913 aa13.7□□□□□ -0.22
PCNX4-209ENST00000555569 ALDH4A1P30038 563 aa13.7□□□□□ -0.22
PCNX4-209ENST00000555569 CYLC1P35663 651 aaPredicted RBP13.7□□□□□ -0.22
PCNX4-209ENST00000555569 GPR3P46089 330 aa13.7□□□□□ -0.22
PCNX4-209ENST00000555569 CDK18Q07002 472 aa13.7□□□□□ -0.22
PCNX4-209ENST00000555569 LRP8Q14114 963 aa13.7□□□□□ -0.22
PCNX4-209ENST00000555569 PRKD1Q15139 912 aaPredicted RBP13.7□□□□□ -0.22
PCNX4-209ENST00000555569 LLGL1Q15334 1064 aa13.7□□□□□ -0.22
PCNX4-209ENST00000555569 SPA17Q15506 151 aa13.7□□□□□ -0.22
PCNX4-209ENST00000555569 AMZ1Q400G9 498 aa13.7□□□□□ -0.22
PCNX4-209ENST00000555569 KAZNQ674X7 775 aa13.7□□□□□ -0.22
PCNX4-209ENST00000555569 TMPRSS9Q7Z410 1059 aa13.7□□□□□ -0.22
PCNX4-209ENST00000555569 PIM3Q86V86 326 aa13.7□□□□□ -0.22
PCNX4-209ENST00000555569 JAMLQ86YT9 394 aa13.7□□□□□ -0.22
PCNX4-209ENST00000555569 SPATA22Q8NHS9 363 aa13.7□□□□□ -0.22
PCNX4-209ENST00000555569 TFB1MQ8WVM0 346 aaKnown RBP13.7□□□□□ -0.22
PCNX4-209ENST00000555569 TMEM159Q96B96 161 aa13.7□□□□□ -0.22
PCNX4-209ENST00000555569 GOLPH3Q9H4A6 298 aa13.7□□□□□ -0.22
PCNX4-209ENST00000555569 ZFYVE1Q9HBF4 777 aa13.7□□□□□ -0.22
PCNX4-209ENST00000555569 MAGEE1Q9HCI5 957 aa13.7□□□□□ -0.22
PCNX4-209ENST00000555569 LUC7LQ9NQ29 371 aaKnown RBP13.7□□□□□ -0.22
PCNX4-209ENST00000555569 SAE1Q9UBE0 346 aaPredicted RBP13.7□□□□□ -0.22
PCNX4-209ENST00000555569 PISDQ9UG56 409 aa13.7□□□□□ -0.22
PCNX4-209ENST00000555569 ZNHIT2Q9UHR6 403 aa13.7□□□□□ -0.22
PCNX4-209ENST00000555569 SHOC2Q9UQ13 582 aa13.7□□□□□ -0.22
PCNX4-209ENST00000555569 LOXL2Q9Y4K0 774 aa13.7□□□□□ -0.22
PCNX4-209ENST00000555569 PCDHGA7Q9Y5G6 932 aa13.7□□□□□ -0.22
PCNX4-209ENST00000555569 TEX51A0A1B0GUA7 166 aa13.69□□□□□ -0.22
PCNX4-209ENST00000555569 PPM1DO15297 605 aa13.69□□□□□ -0.22
PCNX4-209ENST00000555569 ZRANB2O95218 330 aaKnown RBP eCLIP13.69□□□□□ -0.22
PCNX4-209ENST00000555569 NDST3O95803 873 aa13.69□□□□□ -0.22
PCNX4-209ENST00000555569 MT-CYBP00156 380 aaPredicted RBP13.69□□□□□ -0.22
PCNX4-209ENST00000555569 PECAM1P16284 738 aaPredicted RBP13.69□□□□□ -0.22
PCNX4-209ENST00000555569 SLC5A2P31639 672 aa13.69□□□□□ -0.22
PCNX4-209ENST00000555569 COL9A2Q14055 689 aaPredicted RBP13.69□□□□□ -0.22
PCNX4-209ENST00000555569 CLPPQ16740 277 aaPredicted RBP13.69□□□□□ -0.22
PCNX4-209ENST00000555569 TFDP3Q5H9I0 405 aa13.69□□□□□ -0.22
PCNX4-209ENST00000555569 PHF19Q5T6S3 580 aa13.69□□□□□ -0.22
PCNX4-209ENST00000555569 CCDC70Q6NSX1 233 aa13.69□□□□□ -0.22
PCNX4-209ENST00000555569 C11orf63Q6NUN7 778 aa13.69□□□□□ -0.22
PCNX4-209ENST00000555569 USP53Q70EK8 1073 aa13.69□□□□□ -0.22
PCNX4-209ENST00000555569 TMC3Q7Z5M5 1100 aa13.69□□□□□ -0.22
PCNX4-209ENST00000555569 KATNAL2Q8IYT4 538 aa13.69□□□□□ -0.22
PCNX4-209ENST00000555569 RCOR2Q8IZ40 523 aa13.69□□□□□ -0.22
PCNX4-209ENST00000555569 EID2BQ96D98 161 aa13.69□□□□□ -0.22
PCNX4-209ENST00000555569 TEKT5Q96M29 485 aa13.69□□□□□ -0.22
PCNX4-209ENST00000555569 SPATA16Q9BXB7 569 aa13.69□□□□□ -0.22
PCNX4-209ENST00000555569 SEMA6CQ9H3T2 930 aa13.69□□□□□ -0.22
PCNX4-209ENST00000555569 RMI1Q9H9A7 625 aa13.69□□□□□ -0.22
PCNX4-209ENST00000555569 RDH14Q9HBH5 336 aa13.69□□□□□ -0.22
PCNX4-209ENST00000555569 CPNE5Q9HCH3 593 aa13.69□□□□□ -0.22
PCNX4-209ENST00000555569 RAD18Q9NS91 495 aa13.69□□□□□ -0.22
PCNX4-209ENST00000555569 TFR2Q9UP52 801 aa13.69□□□□□ -0.22
PCNX4-209ENST00000555569 SSUH2Q9Y2M2 353 aa13.69□□□□□ -0.22
PCNX4-209ENST00000555569 ZNF711Q9Y462 761 aa13.69□□□□□ -0.22
PCNX4-209ENST00000555569 PRKAB1Q9Y478 270 aa13.69□□□□□ -0.22
PCNX4-209ENST00000555569 PCYT1BQ9Y5K3 369 aaPredicted RBP13.69□□□□□ -0.22
PCNX4-209ENST00000555569 MGAQ8IWI9 3026 aa13.68□□□□□ -0.22
PCNX4-209ENST00000555569 hCG_1818297A0A087WSY0 165 aa13.68□□□□□ -0.22
PCNX4-209ENST00000555569 AGRPO00253 132 aa13.68□□□□□ -0.22
PCNX4-209ENST00000555569 ATXN7O15265 892 aaPredicted RBP13.68□□□□□ -0.22
PCNX4-209ENST00000555569 MTSS1O43312 755 aa13.68□□□□□ -0.22
PCNX4-209ENST00000555569 PMPCBO75439 489 aa13.68□□□□□ -0.22
PCNX4-209ENST00000555569 SLC4A1P02730 911 aa13.68□□□□□ -0.22
PCNX4-209ENST00000555569 ITIH1P19827 911 aa13.68□□□□□ -0.22
PCNX4-209ENST00000555569 CD1CP29017 333 aa13.68□□□□□ -0.22
PCNX4-209ENST00000555569 MARCKSL1P49006 195 aa13.68□□□□□ -0.22
PCNX4-209ENST00000555569 ZNF75DP51815 510 aa13.68□□□□□ -0.22
PCNX4-209ENST00000555569 DCDC1P59894 354 aa13.68□□□□□ -0.22
PCNX4-209ENST00000555569 ADCY2Q08462 1091 aa13.68□□□□□ -0.22
PCNX4-209ENST00000555569 WASHC5Q12768 1159 aa13.68□□□□□ -0.22
PCNX4-209ENST00000555569 CLN3Q13286 438 aa13.68□□□□□ -0.22
PCNX4-209ENST00000555569 ZNF569Q5MCW4 686 aa13.68□□□□□ -0.22
PCNX4-209ENST00000555569 ARHGAP40Q5TG30 622 aa13.68□□□□□ -0.22
PCNX4-209ENST00000555569 ALS2CLQ60I27 953 aa13.68□□□□□ -0.22
PCNX4-209ENST00000555569 CHST15Q7LFX5 561 aaPredicted RBP13.68□□□□□ -0.22
PCNX4-209ENST00000555569 CCDC50Q8IVM0 306 aa13.68□□□□□ -0.22
PCNX4-209ENST00000555569 GPR26Q8NDV2 337 aa13.68□□□□□ -0.22
PCNX4-209ENST00000555569 SLC37A2Q8TED4 501 aa13.68□□□□□ -0.22
PCNX4-209ENST00000555569 P3H4Q92791 437 aa13.68□□□□□ -0.22
PCNX4-209ENST00000555569 RBM41Q96IZ5 413 aaKnown RBP13.68□□□□□ -0.22
PCNX4-209ENST00000555569 PANX2Q96RD6 677 aa13.68□□□□□ -0.22
PCNX4-209ENST00000555569 SRPK1Q96SB4 655 aaKnown RBP13.68□□□□□ -0.22
PCNX4-209ENST00000555569 CMKLR1Q99788 373 aa13.68□□□□□ -0.22
PCNX4-209ENST00000555569 NUDT22Q9BRQ3 303 aa13.68□□□□□ -0.22
PCNX4-209ENST00000555569 ZSCAN5AQ9BUG6 496 aa13.68□□□□□ -0.22
PCNX4-209ENST00000555569 GPR63Q9BZJ6 419 aa13.68□□□□□ -0.22
PCNX4-209ENST00000555569 CARD9Q9H257 536 aa13.68□□□□□ -0.22
PCNX4-209ENST00000555569 UBP1Q9NZI7 540 aa13.68□□□□□ -0.22
PCNX4-209ENST00000555569 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.68□□□□□ -0.22
PCNX4-209ENST00000555569 AKAP7Q9P0M2 348 aaPredicted RBP13.68□□□□□ -0.22
PCNX4-209ENST00000555569 NFKBIL1Q9UBC1 381 aaPredicted RBP13.68□□□□□ -0.22
PCNX4-209ENST00000555569 FAM153AQ9UHL3 310 aa13.68□□□□□ -0.22
PCNX4-209ENST00000555569 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.68□□□□□ -0.22
PCNX4-209ENST00000555569 BAHCC1Q9P281 2608 aa13.68□□□□□ -0.22
PCNX4-209ENST00000555569 TRBV23OR9-2A0A075B6M9 112 aa13.67□□□□□ -0.22
PCNX4-209ENST00000555569 IGHV1OR21-1A0A087WYE8 117 aa13.67□□□□□ -0.22
PCNX4-209ENST00000555569 NVLO15381 856 aaKnown RBP13.67□□□□□ -0.22
PCNX4-209ENST00000555569 GRID2O43424 1007 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms