RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 ICE1Q9Y2F5 2266 aa12.99□□□□□ -0.33
XRCC3-212ENST00000555231 A0A0J9YYE9 177 aa12.99□□□□□ -0.33
XRCC3-212ENST00000555231 FZD6O60353 706 aa12.99□□□□□ -0.33
XRCC3-212ENST00000555231 TRBC1P01850 177 aa12.99□□□□□ -0.33
XRCC3-212ENST00000555231 FURINP09958 794 aa12.99□□□□□ -0.33
XRCC3-212ENST00000555231 DLSTP36957 453 aa12.99□□□□□ -0.33
XRCC3-212ENST00000555231 STAT5AP42229 794 aa12.99□□□□□ -0.33
XRCC3-212ENST00000555231 ZNF135P52742 658 aaPredicted RBP12.99□□□□□ -0.33
XRCC3-212ENST00000555231 GFERP55789 205 aa12.99□□□□□ -0.33
XRCC3-212ENST00000555231 FOXM1Q08050 763 aa12.99□□□□□ -0.33
XRCC3-212ENST00000555231 ERV3-1Q14264 604 aa12.99□□□□□ -0.33
XRCC3-212ENST00000555231 IHHQ14623 411 aa12.99□□□□□ -0.33
XRCC3-212ENST00000555231 IYDQ6PHW0 289 aa12.99□□□□□ -0.33
XRCC3-212ENST00000555231 ZNF765Q7L2R6 523 aa12.99□□□□□ -0.33
XRCC3-212ENST00000555231 PSTKQ8IV42 348 aaKnown RBP12.99□□□□□ -0.33
XRCC3-212ENST00000555231 ESX1Q8N693 406 aa12.99□□□□□ -0.33
XRCC3-212ENST00000555231 TEX19Q8NA77 164 aa12.99□□□□□ -0.33
XRCC3-212ENST00000555231 EXD1Q8NHP7 514 aa12.99□□□□□ -0.33
XRCC3-212ENST00000555231 ERGIC2Q96RQ1 377 aa12.99□□□□□ -0.33
XRCC3-212ENST00000555231 LRRC4CQ9HCJ2 640 aa12.99□□□□□ -0.33
XRCC3-212ENST00000555231 MYO1AQ9UBC5 1043 aa12.99□□□□□ -0.33
XRCC3-212ENST00000555231 KCNMB2Q9Y691 235 aa12.99□□□□□ -0.33
XRCC3-212ENST00000555231 A6NCN8 305 aa12.98□□□□□ -0.33
XRCC3-212ENST00000555231 CLDN7O95471 211 aa12.98□□□□□ -0.33
XRCC3-212ENST00000555231 PYGLP06737 847 aa12.98□□□□□ -0.33
XRCC3-212ENST00000555231 KRT7P08729 469 aa12.98□□□□□ -0.33
XRCC3-212ENST00000555231 CCDC172P0C7W6 258 aa12.98□□□□□ -0.33
XRCC3-212ENST00000555231 NOP2P46087 812 aaKnown RBP12.98□□□□□ -0.33
XRCC3-212ENST00000555231 SEPHS1P49903 392 aa12.98□□□□□ -0.33
XRCC3-212ENST00000555231 STC1P52823 247 aa12.98□□□□□ -0.33
XRCC3-212ENST00000555231 EPHB1P54762 984 aa12.98□□□□□ -0.33
XRCC3-212ENST00000555231 CDH6P55285 790 aa12.98□□□□□ -0.33
XRCC3-212ENST00000555231 DPYSL2Q16555 572 aa12.98□□□□□ -0.33
XRCC3-212ENST00000555231 RALGPS1Q5JS13 557 aa12.98□□□□□ -0.33
XRCC3-212ENST00000555231 TXNRD3NBQ6F5E7 133 aa12.98□□□□□ -0.33
XRCC3-212ENST00000555231 POLNQ7Z5Q5 900 aa12.98□□□□□ -0.33
XRCC3-212ENST00000555231 TMEM135Q86UB9 458 aa12.98□□□□□ -0.33
XRCC3-212ENST00000555231 SLC9B2Q86UD5 537 aa12.98□□□□□ -0.33
XRCC3-212ENST00000555231 NLRP8Q86W28 1048 aa12.98□□□□□ -0.33
XRCC3-212ENST00000555231 ATCAYQ86WG3 371 aa12.98□□□□□ -0.33
XRCC3-212ENST00000555231 NDUFAF2Q8N183 169 aa12.98□□□□□ -0.33
XRCC3-212ENST00000555231 GALNT6Q8NCL4 622 aa12.98□□□□□ -0.33
XRCC3-212ENST00000555231 ANKRD20A12PQ8NF67 263 aa12.98□□□□□ -0.33
XRCC3-212ENST00000555231 SH3KBP1Q96B97 665 aa12.98□□□□□ -0.33
XRCC3-212ENST00000555231 ZNF653Q96CK0 615 aa12.98□□□□□ -0.33
XRCC3-212ENST00000555231 ELMO2Q96JJ3 720 aa12.98□□□□□ -0.33
XRCC3-212ENST00000555231 CSPG4P5Q96PW8 444 aa12.98□□□□□ -0.33
XRCC3-212ENST00000555231 WDR24Q96S15 920 aa12.98□□□□□ -0.33
XRCC3-212ENST00000555231 ULBP3Q9BZM4 244 aa12.98□□□□□ -0.33
XRCC3-212ENST00000555231 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.98□□□□□ -0.33
XRCC3-212ENST00000555231 SIDT1Q9NXL6 827 aaKnown RBP12.98□□□□□ -0.33
XRCC3-212ENST00000555231 CPNE7Q9UBL6 633 aa12.98□□□□□ -0.33
XRCC3-212ENST00000555231 CROTQ9UKG9 612 aa12.98□□□□□ -0.33
XRCC3-212ENST00000555231 CNOT6Q9ULM6 557 aaKnown RBP12.98□□□□□ -0.33
XRCC3-212ENST00000555231 CHKBQ9Y259 395 aa12.98□□□□□ -0.33
XRCC3-212ENST00000555231 KCTD3Q9Y597 815 aa12.98□□□□□ -0.33
XRCC3-212ENST00000555231 PCDHB3Q9Y5E6 796 aa12.98□□□□□ -0.33
XRCC3-212ENST00000555231 SPENQ96T58 3664 aaKnown RBP12.98□□□□□ -0.33
XRCC3-212ENST00000555231 UTP20O75691 2785 aaKnown RBP12.98□□□□□ -0.33
XRCC3-212ENST00000555231 USP9XQ93008 2570 aaPredicted RBP12.97□□□□□ -0.33
XRCC3-212ENST00000555231 SPTAN1Q13813 2472 aaKnown RBP12.97□□□□□ -0.33
XRCC3-212ENST00000555231 CDC14CA4D256 554 aa12.97□□□□□ -0.33
XRCC3-212ENST00000555231 FADS2P1A8MWK0 482 aa12.97□□□□□ -0.33
XRCC3-212ENST00000555231 MKRN2OSH3BPM6 223 aa12.97□□□□□ -0.33
XRCC3-212ENST00000555231 KATNA1O75449 491 aa12.97□□□□□ -0.33
XRCC3-212ENST00000555231 FTLP02792 175 aaPredicted RBP12.97□□□□□ -0.33
XRCC3-212ENST00000555231 RARAP10276 462 aa12.97□□□□□ -0.33
XRCC3-212ENST00000555231 ATP1A3P13637 1013 aa12.97□□□□□ -0.33
XRCC3-212ENST00000555231 F3P13726 295 aa12.97□□□□□ -0.33
XRCC3-212ENST00000555231 ZNF30P17039 623 aa12.97□□□□□ -0.33
XRCC3-212ENST00000555231 TYRP1P17643 537 aa12.97□□□□□ -0.33
XRCC3-212ENST00000555231 CDK11BP21127 795 aaKnown RBP12.97□□□□□ -0.33
XRCC3-212ENST00000555231 UQCRFS1P47985 274 aa12.97□□□□□ -0.33
XRCC3-212ENST00000555231 CD97P48960 835 aa12.97□□□□□ -0.33
XRCC3-212ENST00000555231 EPHA4P54764 986 aa12.97□□□□□ -0.33
XRCC3-212ENST00000555231 SH3BP2P78314 561 aa12.97□□□□□ -0.33
XRCC3-212ENST00000555231 DSC2Q02487 901 aa12.97□□□□□ -0.33
XRCC3-212ENST00000555231 MAP7Q14244 749 aa12.97□□□□□ -0.33
XRCC3-212ENST00000555231 CRTC2Q53ET0 693 aaPredicted RBP12.97□□□□□ -0.33
XRCC3-212ENST00000555231 ZNF648Q5T619 568 aaPredicted RBP12.97□□□□□ -0.33
XRCC3-212ENST00000555231 PPP1R2P3Q6NXS1 205 aa12.97□□□□□ -0.33
XRCC3-212ENST00000555231 C6orf15Q6UXA7 325 aaPredicted RBP12.97□□□□□ -0.33
XRCC3-212ENST00000555231 LYSMD3Q7Z3D4 306 aa12.97□□□□□ -0.33
XRCC3-212ENST00000555231 CCDC13Q8IYE1 715 aa12.97□□□□□ -0.33
XRCC3-212ENST00000555231 HERPUD2Q9BSE4 406 aa12.97□□□□□ -0.33
XRCC3-212ENST00000555231 ARFGAP3Q9NP61 516 aa12.97□□□□□ -0.33
XRCC3-212ENST00000555231 PRDM8Q9NQV8 689 aa12.97□□□□□ -0.33
XRCC3-212ENST00000555231 OGFRQ9NZT2 677 aa12.97□□□□□ -0.33
XRCC3-212ENST00000555231 VPS18Q9P253 973 aa12.97□□□□□ -0.33
XRCC3-212ENST00000555231 TTLL3Q9Y4R7 772 aa12.97□□□□□ -0.33
XRCC3-212ENST00000555231 MN1Q10571 1320 aaPredicted RBP12.96□□□□□ -0.33
XRCC3-212ENST00000555231 KIAA0754O94854 1291 aa12.96□□□□□ -0.33
XRCC3-212ENST00000555231 PDGFAP04085 211 aa12.96□□□□□ -0.33
XRCC3-212ENST00000555231 ASB18Q6ZVZ8 466 aa12.96□□□□□ -0.33
XRCC3-212ENST00000555231 APTXQ7Z2E3 356 aaKnown RBP12.96□□□□□ -0.33
XRCC3-212ENST00000555231 ZNF571Q7Z3V5 609 aaPredicted RBP12.96□□□□□ -0.33
XRCC3-212ENST00000555231 PLXDC1Q8IUK5 500 aa12.96□□□□□ -0.33
XRCC3-212ENST00000555231 RASGRP3Q8IV61 690 aa12.96□□□□□ -0.33
XRCC3-212ENST00000555231 TEX26Q8N6G2 289 aa12.96□□□□□ -0.33
XRCC3-212ENST00000555231 LPCAT1Q8NF37 534 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms