RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 SEPT6Q14141 434 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 CYTH1Q15438 398 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 OR4D1Q15615 310 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 CTF1Q16619 201 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 TIGD5Q53EQ6 642 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 USP39Q53GS9 565 aaKnown RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 SIRPB2Q5JXA9 342 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 CLLU1OSQ5K130 101 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 GPRC6AQ5T6X5 926 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 LYPLAL1Q5VWZ2 237 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 SEL1L3Q68CR1 1132 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 ZNF770Q6IQ21 691 aaPredicted RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 GALNT18Q6P9A2 607 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 TMEM154Q6P9G4 183 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 ACOT1Q86TX2 421 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 SERPINA11Q86U17 422 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 RASSF3Q86WH2 238 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 KIAA2013Q8IYS2 634 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 SVOPLQ8N434 492 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 ZNF485Q8NCK3 441 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 OR52K1Q8NGK4 314 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 OR2T11Q8NH01 316 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 CEP70Q8NHQ1 597 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 UBA3Q8TBC4 463 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 FNDC8Q8TC99 324 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 CXorf40BQ96DE9 158 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 KIF12Q96FN5 646 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 LINC00615Q96LM1 132 aaPredicted RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 VPS35Q96QK1 796 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 ZNF300Q96RE9 604 aaPredicted RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 PARK7Q99497 189 aaKnown RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 TMEM79Q9BSE2 394 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 SLC25A23Q9BV35 468 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 MFRPQ9BY79 579 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 CPEB1Q9BZB8 566 aaKnown RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 MUC3BQ9H195 1237 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 RPF2Q9H7B2 306 aaKnown RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 VPS37BQ9H9H4 285 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 NANOGQ9H9S0 305 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 PAPOLBQ9NRJ5 636 aaKnown RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 THG1LQ9NWX6 298 aaKnown RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 BCAP29Q9UHQ4 241 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 MAGED2Q9UNF1 606 aaPredicted RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 ICKQ9UPZ9 632 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 CDYLQ9Y232 598 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 LSM2Q9Y333 95 aaKnown RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 DOCK6Q96HP0 2047 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 ILVBLA1L0T0 632 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 C2orf71A6NGG8 1288 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 CAPN8A6NHC0 703 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 ADM5C9JUS6 153 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 H3BMM5 538 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 PSMD12O00232 456 aaPredicted RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 MUSKO15146 869 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 GALR2O43603 387 aaPredicted RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 HCRTO43612 131 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 LILRB5O75023 590 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 TMCC1O94876 653 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 ESRRBO95718 433 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 FAM200BP0CF97 657 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 SLC2A3P11169 496 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 GNAT1P11488 350 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 FCGR1AP12314 374 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 CAPN3P20807 821 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 ITPKAP23677 461 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 MPSTP25325 297 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 CDH13P55290 713 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 WNT3P56703 355 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 WNT3AP56704 352 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 SH3BP2P78314 561 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 CAP1Q01518 475 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 ADIGQ0VDE8 80 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 ABRQ12979 859 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 ATP1A4Q13733 1029 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 CYLC2Q14093 348 aaPredicted RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 GEN1Q17RS7 908 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 ODF2Q5BJF6 829 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 PPM1JQ5JR12 505 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 SAMD4BQ5PRF9 694 aaKnown RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 SLX4IPQ5VYV7 408 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 TUBA3EQ6PEY2 450 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 IZUMO2Q6UXV1 221 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 Q6ZSR9 355 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 DENND5BQ6ZUT9 1274 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 EGFL6Q8IUX8 553 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 ARID3BQ8IVW6 561 aaPredicted RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 SYNPOQ8N3V7 929 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 FAM109AQ8N4B1 249 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 PDCD7Q8N8D1 485 aaKnown RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 GLB1L3Q8NCI6 653 aaPredicted RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 TNIP2Q8NFZ5 429 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 PXYLP1Q8TE99 480 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 DEPDC1BQ8WUY9 529 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 TRUB1Q8WWH5 349 aaKnown RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 JDP2Q8WYK2 163 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 HSPH1Q92598 858 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 SEPT8Q92599 483 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 ITFG2Q969R8 447 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 ATP6V1E2Q96A05 226 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 TP53INP1Q96A56 240 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms