RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 PYCR3Q53H96 274 aa20.21■□□□□ 0.83
FOXA1-203ENST00000553751 PERM1Q5SV97 790 aa20.21■□□□□ 0.83
FOXA1-203ENST00000553751 PDPK2PQ6A1A2 396 aa20.21■□□□□ 0.83
FOXA1-203ENST00000553751 ARHGEF18Q6ZSZ5 1173 aa20.21■□□□□ 0.83
FOXA1-203ENST00000553751 MARK2Q7KZI7 788 aaKnown RBP20.21■□□□□ 0.83
FOXA1-203ENST00000553751 SFTPA2Q8IWL1 248 aa20.21■□□□□ 0.83
FOXA1-203ENST00000553751 GPR156Q8NFN8 814 aa20.21■□□□□ 0.83
FOXA1-203ENST00000553751 NAT6Q93015 286 aa20.21■□□□□ 0.83
FOXA1-203ENST00000553751 RTP4Q96DX8 246 aa20.21■□□□□ 0.83
FOXA1-203ENST00000553751 OR2M4Q96R27 311 aa20.21■□□□□ 0.83
FOXA1-203ENST00000553751 APOL2Q9BQE5 337 aa20.21■□□□□ 0.83
FOXA1-203ENST00000553751 GSDMCQ9BYG8 508 aa20.21■□□□□ 0.83
FOXA1-203ENST00000553751 FRMD8P1Q9BZ68 369 aaPredicted RBP20.21■□□□□ 0.83
FOXA1-203ENST00000553751 BPIFA1Q9NP55 256 aa20.21■□□□□ 0.83
FOXA1-203ENST00000553751 GULP1Q9UBP9 304 aa20.21■□□□□ 0.83
FOXA1-203ENST00000553751 PCYT1BQ9Y5K3 369 aaPredicted RBP20.21■□□□□ 0.83
FOXA1-203ENST00000553751 NOBOXO60393 691 aa20.2■□□□□ 0.82
FOXA1-203ENST00000553751 DNAJC6O75061 913 aa20.2■□□□□ 0.82
FOXA1-203ENST00000553751 METTL18O95568 372 aa20.2■□□□□ 0.82
FOXA1-203ENST00000553751 ASMTLO95671 621 aa20.2■□□□□ 0.82
FOXA1-203ENST00000553751 PROS1P07225 676 aa20.2■□□□□ 0.82
FOXA1-203ENST00000553751 AK4P27144 223 aaPredicted RBP20.2■□□□□ 0.82
FOXA1-203ENST00000553751 CTBSQ01459 385 aa20.2■□□□□ 0.82
FOXA1-203ENST00000553751 SIX1Q15475 284 aaPredicted RBP20.2■□□□□ 0.82
FOXA1-203ENST00000553751 PARP6Q2NL67 630 aa20.2■□□□□ 0.82
FOXA1-203ENST00000553751 CDCP2Q5VXM1 449 aa20.2■□□□□ 0.82
FOXA1-203ENST00000553751 OGFOD3Q6PK18 319 aa20.2■□□□□ 0.82
FOXA1-203ENST00000553751 DCBLD1Q8N8Z6 715 aa20.2■□□□□ 0.82
FOXA1-203ENST00000553751 FAM46DQ8NEK8 389 aa20.2■□□□□ 0.82
FOXA1-203ENST00000553751 MAPK15Q8TD08 544 aa20.2■□□□□ 0.82
FOXA1-203ENST00000553751 IL17CQ9P0M4 197 aa20.2■□□□□ 0.82
FOXA1-203ENST00000553751 KNTC1P50748 2209 aa20.2■□□□□ 0.82
FOXA1-203ENST00000553751 COL27A1Q8IZC6 1860 aaPredicted RBP20.2■□□□□ 0.82
FOXA1-203ENST00000553751 B4DGG1 531 aa20.19■□□□□ 0.82
FOXA1-203ENST00000553751 JUPP14923 745 aa20.19■□□□□ 0.82
FOXA1-203ENST00000553751 KCTD11Q693B1 232 aa20.19■□□□□ 0.82
FOXA1-203ENST00000553751 DENND5AQ6IQ26 1287 aa20.19■□□□□ 0.82
FOXA1-203ENST00000553751 GALNT13Q8IUC8 556 aa20.19■□□□□ 0.82
FOXA1-203ENST00000553751 CACTIN-AS1Q8N1I8 211 aa20.19■□□□□ 0.82
FOXA1-203ENST00000553751 C1orf54Q8WWF1 131 aa20.19■□□□□ 0.82
FOXA1-203ENST00000553751 GLYATL1Q969I3 302 aa20.19■□□□□ 0.82
FOXA1-203ENST00000553751 PDLIM2Q96JY6 352 aa20.19■□□□□ 0.82
FOXA1-203ENST00000553751 TBL1YQ9BQ87 522 aa20.19■□□□□ 0.82
FOXA1-203ENST00000553751 DPEP2Q9H4A9 486 aa20.19■□□□□ 0.82
FOXA1-203ENST00000553751 IL26Q9NPH9 171 aa20.19■□□□□ 0.82
FOXA1-203ENST00000553751 SPATS2LQ9NUQ6 558 aaKnown RBP20.19■□□□□ 0.82
FOXA1-203ENST00000553751 TAAR2Q9P1P5 351 aa20.19■□□□□ 0.82
FOXA1-203ENST00000553751 CLCA2Q9UQC9 943 aa20.19■□□□□ 0.82
FOXA1-203ENST00000553751 PLEKHM1Q9Y4G2 1056 aa20.19■□□□□ 0.82
FOXA1-203ENST00000553751 GPSM3Q9Y4H4 160 aa20.19■□□□□ 0.82
FOXA1-203ENST00000553751 RP1P56715 2156 aa20.19■□□□□ 0.82
FOXA1-203ENST00000553751 ARHGEF17Q96PE2 2063 aaPredicted RBP20.18■□□□□ 0.82
FOXA1-203ENST00000553751 FREM2Q5SZK8 3169 aa20.18■□□□□ 0.82
FOXA1-203ENST00000553751 BUD23O43709 281 aaKnown RBP20.18■□□□□ 0.82
FOXA1-203ENST00000553751 USP12O75317 370 aa20.18■□□□□ 0.82
FOXA1-203ENST00000553751 MT-CO3P00414 261 aa20.18■□□□□ 0.82
FOXA1-203ENST00000553751 TARDBPQ13148 414 aaKnown RBP eCLIP20.18■□□□□ 0.82
FOXA1-203ENST00000553751 MSLNQ13421 630 aaPredicted RBP20.18■□□□□ 0.82
FOXA1-203ENST00000553751 LRP8Q14114 963 aa20.18■□□□□ 0.82
FOXA1-203ENST00000553751 SPARCL1Q14515 664 aa20.18■□□□□ 0.82
FOXA1-203ENST00000553751 P3H1Q32P28 736 aa20.18■□□□□ 0.82
FOXA1-203ENST00000553751 ZNF648Q5T619 568 aaPredicted RBP20.18■□□□□ 0.82
FOXA1-203ENST00000553751 SLC30A9Q6PML9 568 aa20.18■□□□□ 0.82
FOXA1-203ENST00000553751 PHYKPLQ8IUZ5 450 aa20.18■□□□□ 0.82
FOXA1-203ENST00000553751 DTX3LQ8TDB6 740 aa20.18■□□□□ 0.82
FOXA1-203ENST00000553751 CCDC74AQ96AQ1 378 aa20.18■□□□□ 0.82
FOXA1-203ENST00000553751 VPS35Q96QK1 796 aa20.18■□□□□ 0.82
FOXA1-203ENST00000553751 CCDC3Q9BQI4 270 aa20.18■□□□□ 0.82
FOXA1-203ENST00000553751 ARNT2Q9HBZ2 717 aa20.18■□□□□ 0.82
FOXA1-203ENST00000553751 ARFGAP3Q9NP61 516 aa20.18■□□□□ 0.82
FOXA1-203ENST00000553751 ATXN10Q9UBB4 475 aa20.18■□□□□ 0.82
FOXA1-203ENST00000553751 RABGEF1Q9UJ41 708 aa20.18■□□□□ 0.82
FOXA1-203ENST00000553751 TMPRSS11EQ9UL52 423 aa20.18■□□□□ 0.82
FOXA1-203ENST00000553751 PRKAB1Q9Y478 270 aa20.18■□□□□ 0.82
FOXA1-203ENST00000553751 ARL5AQ9Y689 179 aa20.18■□□□□ 0.82
FOXA1-203ENST00000553751 TMEM8BA6NDV4 472 aa20.17■□□□□ 0.82
FOXA1-203ENST00000553751 GAPDHSO14556 408 aaPredicted RBP20.17■□□□□ 0.82
FOXA1-203ENST00000553751 CASC3O15234 703 aaKnown RBP20.17■□□□□ 0.82
FOXA1-203ENST00000553751 SLC25A14O95258 325 aaPredicted RBP20.17■□□□□ 0.82
FOXA1-203ENST00000553751 FGGP02679 453 aa20.17■□□□□ 0.82
FOXA1-203ENST00000553751 CAPNS1P04632 268 aa20.17■□□□□ 0.82
FOXA1-203ENST00000553751 STIP1P31948 543 aaKnown RBP20.17■□□□□ 0.82
FOXA1-203ENST00000553751 SPAM1P38567 509 aa20.17■□□□□ 0.82
FOXA1-203ENST00000553751 HLTFQ14527 1009 aaKnown RBP eCLIP20.17■□□□□ 0.82
FOXA1-203ENST00000553751 TAF1AQ15573 450 aaPredicted RBP20.17■□□□□ 0.82
FOXA1-203ENST00000553751 ATP13A5Q4VNC0 1218 aa20.17■□□□□ 0.82
FOXA1-203ENST00000553751 C14orf28Q4W4Y0 310 aa20.17■□□□□ 0.82
FOXA1-203ENST00000553751 CERCAMQ5T4B2 595 aa20.17■□□□□ 0.82
FOXA1-203ENST00000553751 ZDHHC20Q5W0Z9 365 aa20.17■□□□□ 0.82
FOXA1-203ENST00000553751 C17orf82Q86X59 251 aaPredicted RBP20.17■□□□□ 0.82
FOXA1-203ENST00000553751 REXO1L1PQ8IX06 675 aa20.17■□□□□ 0.82
FOXA1-203ENST00000553751 KDF1Q8NAX2 398 aaPredicted RBP20.17■□□□□ 0.82
FOXA1-203ENST00000553751 ABCG4Q9H172 646 aa20.17■□□□□ 0.82
FOXA1-203ENST00000553751 OR2AG1Q9H205 316 aa20.17■□□□□ 0.82
FOXA1-203ENST00000553751 RMI1Q9H9A7 625 aa20.17■□□□□ 0.82
FOXA1-203ENST00000553751 ZNF106Q9H2Y7 1883 aaKnown RBP20.17■□□□□ 0.82
FOXA1-203ENST00000553751 MYLKQ15746 1914 aa20.17■□□□□ 0.82
FOXA1-203ENST00000553751 NUAK1O60285 661 aa20.16■□□□□ 0.82
FOXA1-203ENST00000553751 PPFIA2O75334 1257 aa20.16■□□□□ 0.82
FOXA1-203ENST00000553751 ZNF8P17098 575 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms