RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 AHI1Q8N157 1196 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 STK40Q8N2I9 435 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 FBXO39Q8N4B4 442 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 MINDY1Q8N5J2 469 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 TMEM102Q8N9M5 508 aaPredicted RBP12.85□□□□□ -0.35
SHMT2-205ENST00000553474 TWIST2Q8WVJ9 160 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 ZUFSPQ96AP4 578 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 RMDN1Q96DB5 314 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 MYRFLQ96LU7 910 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 GCNAQ96QF7 691 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 AKTIPQ9H8T0 292 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 COPS7BQ9H9Q2 264 aaPredicted RBP12.85□□□□□ -0.35
SHMT2-205ENST00000553474 MID1IP1Q9NPA3 183 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 SCUBE2Q9NQ36 999 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 SDR39U1Q9NRG7 319 aaPredicted RBP12.85□□□□□ -0.35
SHMT2-205ENST00000553474 PAPOLBQ9NRJ5 636 aaKnown RBP12.85□□□□□ -0.35
SHMT2-205ENST00000553474 GID8Q9NWU2 228 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 ABCD2Q9UBJ2 740 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 RNF112Q9ULX5 631 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 MRPL42Q9Y6G3 142 aaKnown RBP12.85□□□□□ -0.35
SHMT2-205ENST00000553474 SLC4A7Q9Y6M7 1214 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 PTPRSQ13332 1948 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 C15orf38-AP3S2A0A0A6YYH1 394 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 TTC24A2A3L6 582 aaPredicted RBP12.84□□□□□ -0.35
SHMT2-205ENST00000553474 CCL22O00626 93 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 CLASP2O75122 1294 aaKnown RBP12.84□□□□□ -0.35
SHMT2-205ENST00000553474 VPS26AO75436 327 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 CHEK2O96017 543 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 RHOCP08134 193 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 RPS17P08708 135 aaKnown RBP12.84□□□□□ -0.35
SHMT2-205ENST00000553474 CALRP27797 417 aaKnown RBP12.84□□□□□ -0.35
SHMT2-205ENST00000553474 CLCQ05315 142 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 BNIP2Q12982 314 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 PPIGQ13427 754 aaKnown RBP eCLIP12.84□□□□□ -0.353e-8■□□□□ 10.3
SHMT2-205ENST00000553474 OR4D1Q15615 310 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 PFKFB4Q16877 469 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 GEN1Q17RS7 908 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 ADGRF1Q5T601 910 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 UGT3A1Q6NUS8 523 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 PAOXQ6QHF9 649 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 RSPO2Q6UXX9 243 aaPredicted RBP12.84□□□□□ -0.35
SHMT2-205ENST00000553474 ARPINQ7Z6K5 226 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 LILRA2Q8N149 483 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 CRIPAKQ8N1N5 446 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 FBXO22Q8NEZ5 403 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 KCNJ9Q92806 393 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 ZFRQ96KR1 1074 aaKnown RBP12.84□□□□□ -0.35
SHMT2-205ENST00000553474 KLHL32Q96NJ5 620 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 MTRRQ9UBK8 725 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 AGO1Q9UL18 857 aaKnown RBP12.84□□□□□ -0.35
SHMT2-205ENST00000553474 PADI4Q9UM07 663 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 AP4B1Q9Y6B7 739 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 A0A0J9YYE9 177 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 UBA6A0AVT1 1052 aaPredicted RBP12.84□□□□□ -0.35
SHMT2-205ENST00000553474 ZNF840PA6NDX5 716 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 PRORSD1PA6NEY8 169 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 AQP12BA6NM10 295 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 ANKRD66B4E2M5 251 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 UBXN8O00124 270 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 TXNDC9O14530 226 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 CXCL10P02778 98 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 ALDOCP09972 364 aaKnown RBP12.84□□□□□ -0.35
SHMT2-205ENST00000553474 HSD17B1P14061 328 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 CCNHP51946 323 aaPredicted RBP12.84□□□□□ -0.35
SHMT2-205ENST00000553474 ROR2Q01974 943 aaKnown RBP12.84□□□□□ -0.35
SHMT2-205ENST00000553474 ADRM1Q16186 407 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 KIF19Q2TAC6 998 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 INO80DQ53TQ3 878 aaPredicted RBP12.84□□□□□ -0.35
SHMT2-205ENST00000553474 CNKSR3Q6P9H4 555 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 DHFR2Q86XF0 187 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 PHYKPLQ8IUZ5 450 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 AQP12AQ8IXF9 295 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 LRRC43Q8N309 656 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 PCDH20Q8N6Y1 951 aaKnown RBP12.84□□□□□ -0.35
SHMT2-205ENST00000553474 OR7D4Q8NG98 312 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 OR4K2Q8NGD2 314 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 NCSTNQ92542 709 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 MYEOVQ96EZ4 313 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 ZNF512Q96ME7 567 aaPredicted RBP12.84□□□□□ -0.35
SHMT2-205ENST00000553474 PKP2Q99959 881 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 GPATCH1Q9BRR8 931 aaKnown RBP12.84□□□□□ -0.35
SHMT2-205ENST00000553474 SPATA16Q9BXB7 569 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 ZNF696Q9H7X3 374 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 IL23AQ9NPF7 189 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 C8orf4Q9NR00 106 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 ARMC1Q9NVT9 282 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 STOML2Q9UJZ1 356 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 PACSIN3Q9UKS6 424 aa12.84□□□□□ -0.35
SHMT2-205ENST00000553474 GRXCR2A6NFK2 248 aa12.83□□□□□ -0.36
SHMT2-205ENST00000553474 ZBBXA8MT70 800 aa12.83□□□□□ -0.36
SHMT2-205ENST00000553474 H3BMM5 538 aa12.83□□□□□ -0.36
SHMT2-205ENST00000553474 GIPC1O14908 333 aa12.83□□□□□ -0.36
SHMT2-205ENST00000553474 PIP5K1BO14986 540 aa12.83□□□□□ -0.36
SHMT2-205ENST00000553474 ANGPT2O15123 496 aa12.83□□□□□ -0.36
SHMT2-205ENST00000553474 ESRRBO95718 433 aa12.83□□□□□ -0.36
SHMT2-205ENST00000553474 EFEMP2O95967 443 aa12.83□□□□□ -0.36
SHMT2-205ENST00000553474 NPPAP01160 153 aa12.83□□□□□ -0.36
SHMT2-205ENST00000553474 PRLP01236 227 aa12.83□□□□□ -0.36
SHMT2-205ENST00000553474 ESR1P03372 595 aa12.83□□□□□ -0.36
SHMT2-205ENST00000553474 PRR35P0CG20 571 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms