RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 NSMCE1Q8WV22 266 aa16.18■□□□□ 0.18
RAB5C-209ENST00000552162 SH3KBP1Q96B97 665 aa16.18■□□□□ 0.18
RAB5C-209ENST00000552162 ULBP3Q9BZM4 244 aa16.18■□□□□ 0.18
RAB5C-209ENST00000552162 TRIM7Q9C029 511 aa16.18■□□□□ 0.18
RAB5C-209ENST00000552162 ETNK2Q9NVF9 386 aa16.18■□□□□ 0.18
RAB5C-209ENST00000552162 CNOT8Q9UFF9 292 aaKnown RBP16.18■□□□□ 0.18
RAB5C-209ENST00000552162 KCNK6Q9Y257 313 aa16.18■□□□□ 0.18
RAB5C-209ENST00000552162 PCDHB3Q9Y5E6 796 aa16.18■□□□□ 0.18
RAB5C-209ENST00000552162 MN1Q10571 1320 aaPredicted RBP16.18■□□□□ 0.18
RAB5C-209ENST00000552162 TMEM191CA6NGB0 347 aa16.17■□□□□ 0.18
RAB5C-209ENST00000552162 H3BRJ5 948 aa16.17■□□□□ 0.18
RAB5C-209ENST00000552162 LRCH4O75427 683 aa16.17■□□□□ 0.18
RAB5C-209ENST00000552162 ATP1A1P05023 1023 aaKnown RBP16.17■□□□□ 0.18
RAB5C-209ENST00000552162 ANKRD34CP0C6C1 535 aa16.17■□□□□ 0.18
RAB5C-209ENST00000552162 SLC2A4P14672 509 aa16.17■□□□□ 0.18
RAB5C-209ENST00000552162 FERP16591 822 aa16.17■□□□□ 0.18
RAB5C-209ENST00000552162 ZNF30P17039 623 aa16.17■□□□□ 0.18
RAB5C-209ENST00000552162 DLSTP36957 453 aa16.17■□□□□ 0.18
RAB5C-209ENST00000552162 ARL4AP40617 200 aa16.17■□□□□ 0.18
RAB5C-209ENST00000552162 MARC1Q5VT66 337 aa16.17■□□□□ 0.18
RAB5C-209ENST00000552162 PPP1R2P3Q6NXS1 205 aa16.17■□□□□ 0.18
RAB5C-209ENST00000552162 NLRP8Q86W28 1048 aa16.17■□□□□ 0.18
RAB5C-209ENST00000552162 RNF31Q96EP0 1072 aa16.17■□□□□ 0.18
RAB5C-209ENST00000552162 HERPUD2Q9BSE4 406 aa16.17■□□□□ 0.18
RAB5C-209ENST00000552162 RIOK2Q9BVS4 552 aaKnown RBP16.17■□□□□ 0.18
RAB5C-209ENST00000552162 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.17■□□□□ 0.18
RAB5C-209ENST00000552162 EPB41L1Q9H4G0 881 aa16.17■□□□□ 0.18
RAB5C-209ENST00000552162 VPS18Q9P253 973 aa16.17■□□□□ 0.18
RAB5C-209ENST00000552162 CROTQ9UKG9 612 aa16.17■□□□□ 0.18
RAB5C-209ENST00000552162 A0A0J9YYE9 177 aa16.16■□□□□ 0.18
RAB5C-209ENST00000552162 A6NCN8 305 aa16.16■□□□□ 0.18
RAB5C-209ENST00000552162 LGALS16A8MUM7 142 aa16.16■□□□□ 0.18
RAB5C-209ENST00000552162 FZD6O60353 706 aa16.16■□□□□ 0.18
RAB5C-209ENST00000552162 SNX2O60749 519 aa16.16■□□□□ 0.18
RAB5C-209ENST00000552162 TRBC1P01850 177 aa16.16■□□□□ 0.18
RAB5C-209ENST00000552162 CCDC172P0C7W6 258 aa16.16■□□□□ 0.18
RAB5C-209ENST00000552162 ACP5P13686 325 aa16.16■□□□□ 0.18
RAB5C-209ENST00000552162 F3P13726 295 aa16.16■□□□□ 0.18
RAB5C-209ENST00000552162 ZNF28P17035 718 aa16.16■□□□□ 0.18
RAB5C-209ENST00000552162 AMPD1P23109 780 aa16.16■□□□□ 0.18
RAB5C-209ENST00000552162 STC1P52823 247 aa16.16■□□□□ 0.18
RAB5C-209ENST00000552162 CDH6P55285 790 aa16.16■□□□□ 0.18
RAB5C-209ENST00000552162 FOXM1Q08050 763 aa16.16■□□□□ 0.18
RAB5C-209ENST00000552162 ERV3-1Q14264 604 aa16.16■□□□□ 0.18
RAB5C-209ENST00000552162 DPYSL2Q16555 572 aa16.16■□□□□ 0.18
RAB5C-209ENST00000552162 SMTNL2Q2TAL5 461 aa16.16■□□□□ 0.18
RAB5C-209ENST00000552162 HIST2H2BCQ6DN03 193 aa16.16■□□□□ 0.18
RAB5C-209ENST00000552162 ASB18Q6ZVZ8 466 aa16.16■□□□□ 0.18
RAB5C-209ENST00000552162 PLXDC1Q8IUK5 500 aa16.16■□□□□ 0.18
RAB5C-209ENST00000552162 CCDC13Q8IYE1 715 aa16.16■□□□□ 0.18
RAB5C-209ENST00000552162 SYT11Q9BT88 431 aa16.16■□□□□ 0.18
RAB5C-209ENST00000552162 TBC1D10AQ9BXI6 508 aa16.16■□□□□ 0.18
RAB5C-209ENST00000552162 NT5MQ9NPB1 228 aa16.16■□□□□ 0.18
RAB5C-209ENST00000552162 PRDM8Q9NQV8 689 aa16.16■□□□□ 0.18
RAB5C-209ENST00000552162 FANCLQ9NW38 375 aa16.16■□□□□ 0.18
RAB5C-209ENST00000552162 POLHQ9Y253 713 aa16.16■□□□□ 0.18
RAB5C-209ENST00000552162 OAS3Q9Y6K5 1087 aaKnown RBP16.16■□□□□ 0.18
RAB5C-209ENST00000552162 KIR2DS5A0A0G2JLQ3 304 aa16.15■□□□□ 0.18
RAB5C-209ENST00000552162 A0A0G2JNG1 304 aa16.15■□□□□ 0.18
RAB5C-209ENST00000552162 LILRA5A6NI73 299 aa16.15■□□□□ 0.18
RAB5C-209ENST00000552162 KIR2DS3K7RE56 304 aa16.15■□□□□ 0.18
RAB5C-209ENST00000552162 RFPL1O75677 317 aa16.15■□□□□ 0.18
RAB5C-209ENST00000552162 FURINP09958 794 aa16.15■□□□□ 0.18
RAB5C-209ENST00000552162 ATP1A3P13637 1013 aa16.15■□□□□ 0.18
RAB5C-209ENST00000552162 UQCRFS1P47985 274 aa16.15■□□□□ 0.18
RAB5C-209ENST00000552162 EPHB1P54762 984 aa16.15■□□□□ 0.18
RAB5C-209ENST00000552162 GFERP55789 205 aa16.15■□□□□ 0.18
RAB5C-209ENST00000552162 UBXN1Q04323 297 aa16.15■□□□□ 0.18
RAB5C-209ENST00000552162 KIR2DS5Q14953 304 aa16.15■□□□□ 0.18
RAB5C-209ENST00000552162 C6orf15Q6UXA7 325 aaPredicted RBP16.15■□□□□ 0.18
RAB5C-209ENST00000552162 LYSMD3Q7Z3D4 306 aa16.15■□□□□ 0.18
RAB5C-209ENST00000552162 POLNQ7Z5Q5 900 aa16.15■□□□□ 0.18
RAB5C-209ENST00000552162 GALNT6Q8NCL4 622 aa16.15■□□□□ 0.18
RAB5C-209ENST00000552162 CSPG4P5Q96PW8 444 aa16.15■□□□□ 0.18
RAB5C-209ENST00000552162 CPNE7Q9UBL6 633 aa16.15■□□□□ 0.18
RAB5C-209ENST00000552162 RP1L1Q8IWN7 2480 aaPredicted RBP16.14■□□□□ 0.18
RAB5C-209ENST00000552162 AGFG2O95081 481 aa16.14■□□□□ 0.17
RAB5C-209ENST00000552162 C9P02748 559 aa16.14■□□□□ 0.17
RAB5C-209ENST00000552162 IL1R2P27930 398 aa16.14■□□□□ 0.17
RAB5C-209ENST00000552162 SERPINB6P35237 376 aa16.14■□□□□ 0.17
RAB5C-209ENST00000552162 TMEM135Q86UB9 458 aa16.14■□□□□ 0.17
RAB5C-209ENST00000552162 PHYKPLQ8IUZ5 450 aa16.14■□□□□ 0.17
RAB5C-209ENST00000552162 AVL9Q8NBF6 648 aa16.14■□□□□ 0.17
RAB5C-209ENST00000552162 ANKRD20A12PQ8NF67 263 aa16.14■□□□□ 0.17
RAB5C-209ENST00000552162 HSPH1Q92598 858 aa16.14■□□□□ 0.17
RAB5C-209ENST00000552162 STAMBPL1Q96FJ0 436 aa16.14■□□□□ 0.17
RAB5C-209ENST00000552162 C9orf72Q96LT7 481 aa16.14■□□□□ 0.17
RAB5C-209ENST00000552162 ERGIC2Q96RQ1 377 aa16.14■□□□□ 0.17
RAB5C-209ENST00000552162 POLR1EQ9GZS1 481 aaKnown RBP16.14■□□□□ 0.17
RAB5C-209ENST00000552162 RMI1Q9H9A7 625 aa16.14■□□□□ 0.17
RAB5C-209ENST00000552162 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.14■□□□□ 0.17
RAB5C-209ENST00000552162 PLEKHB1Q9UF11 243 aaPredicted RBP16.14■□□□□ 0.17
RAB5C-209ENST00000552162 LIMA1Q9UHB6 759 aaKnown RBP16.14■□□□□ 0.17
RAB5C-209ENST00000552162 DNPEPQ9ULA0 475 aa16.14■□□□□ 0.17
RAB5C-209ENST00000552162 CNOT6Q9ULM6 557 aaKnown RBP16.14■□□□□ 0.17
RAB5C-209ENST00000552162 CDC14CA4D256 554 aa16.13■□□□□ 0.17
RAB5C-209ENST00000552162 OR5K4A6NMS3 321 aa16.13■□□□□ 0.17
RAB5C-209ENST00000552162 VPS4BO75351 444 aa16.13■□□□□ 0.17
RAB5C-209ENST00000552162 KATNA1O75449 491 aa16.13■□□□□ 0.17
RAB5C-209ENST00000552162 KIAA0754O94854 1291 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms