RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 PACSIN2Q9UNF0 486 aaPredicted RBP18.85■□□□□ 0.61
DDX54-208ENST00000551344 APC2O95996 2303 aa18.85■□□□□ 0.61
DDX54-208ENST00000551344 URB1O60287 2271 aaKnown RBP18.84■□□□□ 0.61
DDX54-208ENST00000551344 B4DGG1 531 aa18.84■□□□□ 0.61
DDX54-208ENST00000551344 KCNN4O15554 427 aa18.84■□□□□ 0.61
DDX54-208ENST00000551344 NUDT21O43809 227 aaKnown RBP18.84■□□□□ 0.61
DDX54-208ENST00000551344 KRT37O76014 449 aa18.84■□□□□ 0.61
DDX54-208ENST00000551344 AK4P27144 223 aaPredicted RBP18.84■□□□□ 0.61
DDX54-208ENST00000551344 GEMP55040 296 aa18.84■□□□□ 0.61
DDX54-208ENST00000551344 SPIDRQ14159 915 aa18.84■□□□□ 0.61
DDX54-208ENST00000551344 ANKRD20A2Q5SQ80 823 aa18.84■□□□□ 0.61
DDX54-208ENST00000551344 ANKRD20A1Q5TYW2 823 aa18.84■□□□□ 0.61
DDX54-208ENST00000551344 ANKRD20A3Q5VUR7 823 aa18.84■□□□□ 0.61
DDX54-208ENST00000551344 GALNT13Q8IUC8 556 aa18.84■□□□□ 0.61
DDX54-208ENST00000551344 TRAM1L1Q8N609 369 aa18.84■□□□□ 0.61
DDX54-208ENST00000551344 IPMKQ8NFU5 416 aa18.84■□□□□ 0.61
DDX54-208ENST00000551344 ZDHHC1Q8WTX9 485 aa18.84■□□□□ 0.61
DDX54-208ENST00000551344 LRIT1Q9P2V4 623 aa18.84■□□□□ 0.61
DDX54-208ENST00000551344 ZNHIT2Q9UHR6 403 aa18.84■□□□□ 0.61
DDX54-208ENST00000551344 GUCA1BQ9UMX6 200 aa18.84■□□□□ 0.61
DDX54-208ENST00000551344 AAR2Q9Y312 384 aaKnown RBP18.84■□□□□ 0.61
DDX54-208ENST00000551344 PCDHB1Q9Y5F3 818 aa18.84■□□□□ 0.61
DDX54-208ENST00000551344 SPO11Q9Y5K1 396 aa18.84■□□□□ 0.61
DDX54-208ENST00000551344 ST14Q9Y5Y6 855 aa18.84■□□□□ 0.61
DDX54-208ENST00000551344 CAPN6Q9Y6Q1 641 aa18.84■□□□□ 0.61
DDX54-208ENST00000551344 ARHGEF17Q96PE2 2063 aaPredicted RBP18.83■□□□□ 0.61
DDX54-208ENST00000551344 AURKAO14965 403 aa18.83■□□□□ 0.6
DDX54-208ENST00000551344 DNAJC6O75061 913 aa18.83■□□□□ 0.6
DDX54-208ENST00000551344 USP12O75317 370 aa18.83■□□□□ 0.6
DDX54-208ENST00000551344 SLC25A14O95258 325 aaPredicted RBP18.83■□□□□ 0.6
DDX54-208ENST00000551344 ATP1A1P05023 1023 aaKnown RBP18.83■□□□□ 0.6
DDX54-208ENST00000551344 BPIP17213 487 aa18.83■□□□□ 0.6
DDX54-208ENST00000551344 PRPSAP1Q14558 356 aa18.83■□□□□ 0.6
DDX54-208ENST00000551344 ZDHHC20Q5W0Z9 365 aa18.83■□□□□ 0.6
DDX54-208ENST00000551344 SLC30A9Q6PML9 568 aa18.83■□□□□ 0.6
DDX54-208ENST00000551344 MARK2Q7KZI7 788 aaKnown RBP18.83■□□□□ 0.6
DDX54-208ENST00000551344 LRRC8AQ8IWT6 810 aa18.83■□□□□ 0.6
DDX54-208ENST00000551344 LSMEM2Q8N112 164 aa18.83■□□□□ 0.6
DDX54-208ENST00000551344 SLC25A41Q8N5S1 370 aa18.83■□□□□ 0.6
DDX54-208ENST00000551344 DTX3LQ8TDB6 740 aa18.83■□□□□ 0.6
DDX54-208ENST00000551344 PPP1R2P1Q96PQ5 205 aa18.83■□□□□ 0.6
DDX54-208ENST00000551344 PLEKHG4BQ96PX9 1271 aa18.83■□□□□ 0.6
DDX54-208ENST00000551344 FSD1LQ9BXM9 530 aa18.83■□□□□ 0.6
DDX54-208ENST00000551344 CARD9Q9H257 536 aa18.83■□□□□ 0.6
DDX54-208ENST00000551344 TRIM39Q9HCM9 518 aa18.83■□□□□ 0.6
DDX54-208ENST00000551344 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.83■□□□□ 0.6
DDX54-208ENST00000551344 RABGEF1Q9UJ41 708 aa18.83■□□□□ 0.6
DDX54-208ENST00000551344 OAS3Q9Y6K5 1087 aaKnown RBP18.83■□□□□ 0.6
DDX54-208ENST00000551344 DMXL2Q8TDJ6 3036 aa18.82■□□□□ 0.6
DDX54-208ENST00000551344 FREM2Q5SZK8 3169 aa18.82■□□□□ 0.6
DDX54-208ENST00000551344 C5orf60A6NFR6 353 aa18.82■□□□□ 0.6
DDX54-208ENST00000551344 GPR89AB7ZAQ6 455 aa18.82■□□□□ 0.6
DDX54-208ENST00000551344 F5H423 210 aaPredicted RBP18.82■□□□□ 0.6
DDX54-208ENST00000551344 GPR89BP0CG08 455 aa18.82■□□□□ 0.6
DDX54-208ENST00000551344 ACTR1BP42025 376 aa18.82■□□□□ 0.6
DDX54-208ENST00000551344 LSSP48449 732 aa18.82■□□□□ 0.6
DDX54-208ENST00000551344 ACTR1AP61163 376 aa18.82■□□□□ 0.6
DDX54-208ENST00000551344 CCL7P80098 99 aa18.82■□□□□ 0.6
DDX54-208ENST00000551344 KLF1Q13351 362 aaPredicted RBP18.82■□□□□ 0.6
DDX54-208ENST00000551344 ZNF569Q5MCW4 686 aa18.82■□□□□ 0.6
DDX54-208ENST00000551344 ALS2CLQ60I27 953 aa18.82■□□□□ 0.6
DDX54-208ENST00000551344 RANBP10Q6VN20 620 aa18.82■□□□□ 0.6
DDX54-208ENST00000551344 ZNF662Q6ZS27 426 aa18.82■□□□□ 0.6
DDX54-208ENST00000551344 SFTPA2Q8IWL1 248 aa18.82■□□□□ 0.6
DDX54-208ENST00000551344 SPATA13Q96N96 652 aa18.82■□□□□ 0.6
DDX54-208ENST00000551344 GFM1Q96RP9 751 aaKnown RBP18.82■□□□□ 0.6
DDX54-208ENST00000551344 FAM118BQ9BPY3 351 aa18.82■□□□□ 0.6
DDX54-208ENST00000551344 LRRN3Q9H3W5 708 aa18.82■□□□□ 0.6
DDX54-208ENST00000551344 RAXQ9Y2V3 346 aa18.82■□□□□ 0.6
DDX54-208ENST00000551344 PLEKHM1Q9Y4G2 1056 aa18.82■□□□□ 0.6
DDX54-208ENST00000551344 ENTPD2Q9Y5L3 495 aa18.82■□□□□ 0.6
DDX54-208ENST00000551344 RNF215Q9Y6U7 377 aa18.82■□□□□ 0.6
DDX54-208ENST00000551344 WDFY3Q8IZQ1 3526 aa18.82■□□□□ 0.6
DDX54-208ENST00000551344 TMX2-CTNND1H3BSU7 103 aa18.81■□□□□ 0.6
DDX54-208ENST00000551344 ZW10O43264 779 aa18.81■□□□□ 0.6
DDX54-208ENST00000551344 NUAK1O60285 661 aa18.81■□□□□ 0.6
DDX54-208ENST00000551344 PPFIA2O75334 1257 aa18.81■□□□□ 0.6
DDX54-208ENST00000551344 ECEL1O95672 775 aa18.81■□□□□ 0.6
DDX54-208ENST00000551344 AGTP01019 485 aa18.81■□□□□ 0.6
DDX54-208ENST00000551344 SLC4A1P02730 911 aa18.81■□□□□ 0.6
DDX54-208ENST00000551344 CHRNA4P43681 627 aa18.81■□□□□ 0.6
DDX54-208ENST00000551344 CCNJLQ8IV13 435 aa18.81■□□□□ 0.6
DDX54-208ENST00000551344 NAGSQ8N159 534 aa18.81■□□□□ 0.6
DDX54-208ENST00000551344 ARL14Q8N4G2 192 aa18.81■□□□□ 0.6
DDX54-208ENST00000551344 TTC30BQ8N4P2 665 aa18.81■□□□□ 0.6
DDX54-208ENST00000551344 GLYATL1Q969I3 302 aa18.81■□□□□ 0.6
DDX54-208ENST00000551344 POLR1BQ9H9Y6 1135 aa18.81■□□□□ 0.6
DDX54-208ENST00000551344 BPIFA1Q9NP55 256 aa18.81■□□□□ 0.6
DDX54-208ENST00000551344 IL17CQ9P0M4 197 aa18.81■□□□□ 0.6
DDX54-208ENST00000551344 ATXN10Q9UBB4 475 aa18.81■□□□□ 0.6
DDX54-208ENST00000551344 ANKRD11Q6UB99 2663 aaPredicted RBP18.8■□□□□ 0.6
DDX54-208ENST00000551344 A0A1W2PQM1 296 aa18.8■□□□□ 0.6
DDX54-208ENST00000551344 GRID2O43424 1007 aa18.8■□□□□ 0.6
DDX54-208ENST00000551344 RPLP0P05388 317 aaKnown RBP18.8■□□□□ 0.6
DDX54-208ENST00000551344 CCDC175P0C221 793 aa18.8■□□□□ 0.6
DDX54-208ENST00000551344 ADRA1AP35348 466 aa18.8■□□□□ 0.6
DDX54-208ENST00000551344 ACTN2P35609 894 aa18.8■□□□□ 0.6
DDX54-208ENST00000551344 CHST15Q7LFX5 561 aaPredicted RBP18.8■□□□□ 0.6
DDX54-208ENST00000551344 GLT6D1Q7Z4J2 308 aa18.8■□□□□ 0.6
DDX54-208ENST00000551344 Q8N9G6 341 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms