RNA–Protein interactions for RNA: ENST00000550962.5

CEP290-205, Transcript of centrosomal protein 290, humanhuman

TSL 3

Gene CEP290, Length 697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-205ENST00000550962 CCDC74AQ96AQ1 378 aa13.22□□□□□ -0.29
CEP290-205ENST00000550962 SCARF2Q96GP6 870 aaPredicted RBP13.22□□□□□ -0.29
CEP290-205ENST00000550962 OXNAD1Q96HP4 312 aaPredicted RBP13.22□□□□□ -0.29
CEP290-205ENST00000550962 MRGPRX2Q96LB1 330 aa13.22□□□□□ -0.29
CEP290-205ENST00000550962 GFM1Q96RP9 751 aaKnown RBP13.22□□□□□ -0.29
CEP290-205ENST00000550962 CARD9Q9H257 536 aa13.22□□□□□ -0.29
CEP290-205ENST00000550962 TAAR2Q9P1P5 351 aa13.22□□□□□ -0.29
CEP290-205ENST00000550962 ZNHIT2Q9UHR6 403 aa13.22□□□□□ -0.29
CEP290-205ENST00000550962 TMEM98Q9Y2Y6 226 aa13.22□□□□□ -0.29
CEP290-205ENST00000550962 ACACBO00763 2458 aa13.21□□□□□ -0.29
CEP290-205ENST00000550962 C5orf60A6NFR6 353 aa13.21□□□□□ -0.29
CEP290-205ENST00000550962 RHPN2P1A8MT19 583 aa13.21□□□□□ -0.29
CEP290-205ENST00000550962 F5H423 210 aaPredicted RBP13.21□□□□□ -0.29
CEP290-205ENST00000550962 VEGFDO43915 354 aa13.21□□□□□ -0.29
CEP290-205ENST00000550962 CSO75390 466 aaKnown RBP13.21□□□□□ -0.29
CEP290-205ENST00000550962 CRTAMO95727 393 aa13.21□□□□□ -0.29
CEP290-205ENST00000550962 SPAM1P38567 509 aa13.21□□□□□ -0.29
CEP290-205ENST00000550962 POLD2P49005 469 aa13.21□□□□□ -0.29
CEP290-205ENST00000550962 CTBSQ01459 385 aa13.21□□□□□ -0.29
CEP290-205ENST00000550962 CAMK2BQ13554 666 aa13.21□□□□□ -0.29
CEP290-205ENST00000550962 ITGA9Q13797 1035 aa13.21□□□□□ -0.29
CEP290-205ENST00000550962 RTP5Q14D33 572 aa13.21□□□□□ -0.29
CEP290-205ENST00000550962 PYCR3Q53H96 274 aa13.21□□□□□ -0.29
CEP290-205ENST00000550962 CERCAMQ5T4B2 595 aa13.21□□□□□ -0.29
CEP290-205ENST00000550962 TRIM74Q86UV6 250 aa13.21□□□□□ -0.29
CEP290-205ENST00000550962 DTX3LQ8TDB6 740 aa13.21□□□□□ -0.29
CEP290-205ENST00000550962 BRSK1Q8TDC3 778 aa13.21□□□□□ -0.29
CEP290-205ENST00000550962 GLYATL1Q969I3 302 aa13.21□□□□□ -0.29
CEP290-205ENST00000550962 TTC25Q96NG3 672 aa13.21□□□□□ -0.29
CEP290-205ENST00000550962 AGAP2Q99490 1192 aa13.21□□□□□ -0.29
CEP290-205ENST00000550962 FICDQ9BVA6 458 aa13.21□□□□□ -0.29
CEP290-205ENST00000550962 STRADBQ9C0K7 418 aa13.21□□□□□ -0.29
CEP290-205ENST00000550962 CAAP1Q9H8G2 361 aa13.21□□□□□ -0.29
CEP290-205ENST00000550962 GRPEL1Q9HAV7 217 aa13.21□□□□□ -0.29
CEP290-205ENST00000550962 TRIM39Q9HCM9 518 aa13.21□□□□□ -0.29
CEP290-205ENST00000550962 LZTFL1Q9NQ48 299 aa13.21□□□□□ -0.29
CEP290-205ENST00000550962 LRIT1Q9P2V4 623 aa13.21□□□□□ -0.29
CEP290-205ENST00000550962 APPL1Q9UKG1 709 aa13.21□□□□□ -0.29
CEP290-205ENST00000550962 PTPRBP23467 1997 aa13.21□□□□□ -0.29
CEP290-205ENST00000550962 LRP4O75096 1905 aa13.21□□□□□ -0.3
CEP290-205ENST00000550962 ARID1BQ8NFD5 2236 aaPredicted RBP13.2□□□□□ -0.3
CEP290-205ENST00000550962 FADS2P1A8MWK0 482 aa13.2□□□□□ -0.3
CEP290-205ENST00000550962 STX7O15400 261 aaKnown RBP13.2□□□□□ -0.3
CEP290-205ENST00000550962 GAS8O95995 478 aa13.2□□□□□ -0.3
CEP290-205ENST00000550962 BPIP17213 487 aa13.2□□□□□ -0.3
CEP290-205ENST00000550962 VCLP18206 1134 aa13.2□□□□□ -0.3
CEP290-205ENST00000550962 PSMB4P28070 264 aa13.2□□□□□ -0.3
CEP290-205ENST00000550962 STIP1P31948 543 aaKnown RBP13.2□□□□□ -0.3
CEP290-205ENST00000550962 CYP4F3Q08477 520 aa13.2□□□□□ -0.3
CEP290-205ENST00000550962 KLF1Q13351 362 aaPredicted RBP13.2□□□□□ -0.3
CEP290-205ENST00000550962 HLTFQ14527 1009 aaKnown RBP eCLIP13.2□□□□□ -0.3
CEP290-205ENST00000550962 CLPPQ16740 277 aaPredicted RBP13.2□□□□□ -0.3
CEP290-205ENST00000550962 PARP6Q2NL67 630 aa13.2□□□□□ -0.3
CEP290-205ENST00000550962 PERM1Q5SV97 790 aa13.2□□□□□ -0.3
CEP290-205ENST00000550962 AADACL2Q6P093 401 aa13.2□□□□□ -0.3
CEP290-205ENST00000550962 CHST15Q7LFX5 561 aaPredicted RBP13.2□□□□□ -0.3
CEP290-205ENST00000550962 CCNJLQ8IV13 435 aa13.2□□□□□ -0.3
CEP290-205ENST00000550962 GPR26Q8NDV2 337 aa13.2□□□□□ -0.3
CEP290-205ENST00000550962 GDAP1Q8TB36 358 aa13.2□□□□□ -0.3
CEP290-205ENST00000550962 CCDC110Q8TBZ0 833 aa13.2□□□□□ -0.3
CEP290-205ENST00000550962 TMEM74Q96NL1 305 aa13.2□□□□□ -0.3
CEP290-205ENST00000550962 VPS35Q96QK1 796 aa13.2□□□□□ -0.3
CEP290-205ENST00000550962 WDR24Q96S15 920 aa13.2□□□□□ -0.3
CEP290-205ENST00000550962 FAM118BQ9BPY3 351 aa13.2□□□□□ -0.3
CEP290-205ENST00000550962 HERPUD2Q9BSE4 406 aa13.2□□□□□ -0.3
CEP290-205ENST00000550962 LRRC40Q9H9A6 602 aa13.2□□□□□ -0.3
CEP290-205ENST00000550962 TPRP12270 2363 aaKnown RBP13.2□□□□□ -0.3
CEP290-205ENST00000550962 GLYATL1P3A0A0U1RQE8 302 aa13.19□□□□□ -0.3
CEP290-205ENST00000550962 A0A0U1RQJ8 604 aa13.19□□□□□ -0.3
CEP290-205ENST00000550962 OR5K4A6NMS3 321 aa13.19□□□□□ -0.3
CEP290-205ENST00000550962 KMOO15229 486 aa13.19□□□□□ -0.3
CEP290-205ENST00000550962 GRID2O43424 1007 aa13.19□□□□□ -0.3
CEP290-205ENST00000550962 NUAK1O60285 661 aa13.19□□□□□ -0.3
CEP290-205ENST00000550962 NOBOXO60393 691 aa13.19□□□□□ -0.3
CEP290-205ENST00000550962 USP12O75317 370 aa13.19□□□□□ -0.3
CEP290-205ENST00000550962 ATP1A1P05023 1023 aaKnown RBP13.19□□□□□ -0.3
CEP290-205ENST00000550962 RPLP0P05388 317 aaKnown RBP13.19□□□□□ -0.3
CEP290-205ENST00000550962 LPOP22079 712 aaPredicted RBP13.19□□□□□ -0.3
CEP290-205ENST00000550962 MSNP26038 577 aaKnown RBP13.19□□□□□ -0.3
CEP290-205ENST00000550962 AK4P27144 223 aaPredicted RBP13.19□□□□□ -0.3
CEP290-205ENST00000550962 HADHAP40939 763 aa13.19□□□□□ -0.3
CEP290-205ENST00000550962 CHRNA4P43681 627 aa13.19□□□□□ -0.3
CEP290-205ENST00000550962 GPR3P46089 330 aa13.19□□□□□ -0.3
CEP290-205ENST00000550962 CLDN6P56747 220 aa13.19□□□□□ -0.3
CEP290-205ENST00000550962 EIF3IQ13347 325 aaKnown RBP13.19□□□□□ -0.3
CEP290-205ENST00000550962 TAF1AQ15573 450 aaPredicted RBP13.19□□□□□ -0.3
CEP290-205ENST00000550962 ISXQ2M1V0 245 aa13.19□□□□□ -0.3
CEP290-205ENST00000550962 LDLRAP1Q5SW96 308 aa13.19□□□□□ -0.3
CEP290-205ENST00000550962 MEI1Q5TIA1 1274 aa13.19□□□□□ -0.3
CEP290-205ENST00000550962 KCTD16Q68DU8 428 aa13.19□□□□□ -0.3
CEP290-205ENST00000550962 LRRTM4Q86VH4 590 aa13.19□□□□□ -0.3
CEP290-205ENST00000550962 FAM71DQ8N9W8 422 aa13.19□□□□□ -0.3
CEP290-205ENST00000550962 CCL4L1Q8NHW4 92 aa13.19□□□□□ -0.3
CEP290-205ENST00000550962 MDM1Q8TC05 714 aa13.19□□□□□ -0.3
CEP290-205ENST00000550962 SH3KBP1Q96B97 665 aa13.19□□□□□ -0.3
CEP290-205ENST00000550962 C19orf43Q9BQ61 176 aa13.19□□□□□ -0.3
CEP290-205ENST00000550962 TBL1YQ9BQ87 522 aa13.19□□□□□ -0.3
CEP290-205ENST00000550962 ZMYND15Q9H091 742 aa13.19□□□□□ -0.3
CEP290-205ENST00000550962 LRRN3Q9H3W5 708 aa13.19□□□□□ -0.3
CEP290-205ENST00000550962 C10orf88Q9H8K7 445 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms