RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 MTSS1LQ765P7 747 aa5.1□□□□□ -1.59
SCAF11-214ENST00000550893 SCD5Q86SK9 330 aa5.1□□□□□ -1.59
SCAF11-214ENST00000550893 TTC30AQ86WT1 665 aa5.1□□□□□ -1.59
SCAF11-214ENST00000550893 SRRM1Q8IYB3 904 aaKnown RBP5.1□□□□□ -1.59
SCAF11-214ENST00000550893 SYCP3Q8IZU3 236 aa5.1□□□□□ -1.59
SCAF11-214ENST00000550893 CMTM8Q8IZV2 173 aa5.1□□□□□ -1.59
SCAF11-214ENST00000550893 ASCC3Q8N3C0 2202 aaKnown RBP5.1□□□□□ -1.59
SCAF11-214ENST00000550893 C12orf29Q8N999 325 aa5.1□□□□□ -1.59
SCAF11-214ENST00000550893 ZBTB44Q8NCP5 570 aa5.1□□□□□ -1.59
SCAF11-214ENST00000550893 SCAMP5Q8TAC9 235 aa5.1□□□□□ -1.59
SCAF11-214ENST00000550893 SPATA17Q96L03 361 aa5.1□□□□□ -1.59
SCAF11-214ENST00000550893 NT5C1BQ96P26 610 aa5.1□□□□□ -1.59
SCAF11-214ENST00000550893 TAAR9Q96RI9 348 aa5.1□□□□□ -1.59
SCAF11-214ENST00000550893 CYP2S1Q96SQ9 504 aa5.1□□□□□ -1.59
SCAF11-214ENST00000550893 PTDSS2Q9BVG9 487 aa5.1□□□□□ -1.59
SCAF11-214ENST00000550893 EXOC1Q9NV70 894 aa5.1□□□□□ -1.59
SCAF11-214ENST00000550893 CGNQ9P2M7 1197 aaKnown RBP5.1□□□□□ -1.59
SCAF11-214ENST00000550893 XPR1Q9UBH6 696 aa5.1□□□□□ -1.59
SCAF11-214ENST00000550893 SERTAD3Q9UJW9 196 aa5.1□□□□□ -1.59
SCAF11-214ENST00000550893 CFAP45Q9UL16 551 aa5.1□□□□□ -1.59
SCAF11-214ENST00000550893 MED16Q9Y2X0 877 aa5.1□□□□□ -1.59
SCAF11-214ENST00000550893 R4GN57 208 aa5.1□□□□□ -1.59
SCAF11-214ENST00000550893 IGF2RP11717 2491 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 GON4LQ3T8J9 2241 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 SMG1Q96Q15 3661 aaKnown RBP5.09□□□□□ -1.59
SCAF11-214ENST00000550893 ZNF840PA6NDX5 716 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 WIPF3A6NGB9 483 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 SPECC1L-ADORA2AF8WAN1 911 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 CHADO15335 359 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 EXOC3O60645 756 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 NXPH3O95157 252 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 PAPSS2O95340 614 aaPredicted RBP5.09□□□□□ -1.59
SCAF11-214ENST00000550893 ERBB2P04626 1255 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 HNRNPCP07910 306 aaKnown RBP eCLIP5.09□□□□□ -1.59
SCAF11-214ENST00000550893 KRT19P08727 400 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 NDUFB7P17568 137 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 PSMC3P17980 439 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 LIPAP38571 399 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 RPS9P46781 194 aaKnown RBP5.09□□□□□ -1.59
SCAF11-214ENST00000550893 CLCN2P51788 898 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 NDST1P52848 882 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 RAD23BP54727 409 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 UCP3P55916 312 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 SATB1Q01826 763 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 ZNF268Q14587 947 aaPredicted RBP5.09□□□□□ -1.59
SCAF11-214ENST00000550893 ZNF699Q32M78 642 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 TMEM196Q5HYL7 178 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 TEDDM1Q5T9Z0 273 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 ZNF658Q5TYW1 1059 aaPredicted RBP5.09□□□□□ -1.59
SCAF11-214ENST00000550893 SNX30Q5VWJ9 437 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 FCRLBQ6BAA4 426 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 CLEC17AQ6ZS10 378 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 DAAM2Q86T65 1068 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 MON1AQ86VX9 555 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 SUGP1Q8IWZ8 645 aaKnown RBP5.09□□□□□ -1.59
SCAF11-214ENST00000550893 RAVER1Q8IY67 606 aaKnown RBP5.09□□□□□ -1.59
SCAF11-214ENST00000550893 CRYBG2Q8N1P7 616 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 ARL14EPQ8N8R7 260 aaPredicted RBP5.09□□□□□ -1.59
SCAF11-214ENST00000550893 MAB21L3Q8N8X9 362 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 SLC4A11Q8NBS3 891 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 LEMD2Q8NC56 503 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 TTC8Q8TAM2 541 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 NOC3LQ8WTT2 800 aaKnown RBP5.09□□□□□ -1.59
SCAF11-214ENST00000550893 C2orf15Q8WU43 125 aaKnown RBP5.09□□□□□ -1.59
SCAF11-214ENST00000550893 DEPDC1BQ8WUY9 529 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 DPF1Q92782 380 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 FAM122AQ96E09 287 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 ANKRD36BP1Q96IX9 119 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 C8orf48Q96LL4 319 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 TIGD1Q96MW7 591 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 HSD3B7Q9H2F3 369 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 LINC00597Q9H2U6 94 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 TASP1Q9H6P5 420 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 FAM49BQ9NUQ9 324 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 PIH1D1Q9NWS0 290 aaKnown RBP5.09□□□□□ -1.59
SCAF11-214ENST00000550893 OBP2AQ9NY56 170 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 CDH9Q9ULB4 789 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 PADI4Q9UM07 663 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 ASB3Q9Y575 518 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 PIAS3Q9Y6X2 628 aa5.09□□□□□ -1.59
SCAF11-214ENST00000550893 BPTFQ12830 3046 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 CHD6Q8TD26 2715 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 LRRK1Q38SD2 2015 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 CGB1A6NKQ9 187 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 BECN2A8MW95 431 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 MDM4O15151 490 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 SLC16A3O15427 465 aaKnown RBP5.08□□□□□ -1.6
SCAF11-214ENST00000550893 COCHO43405 550 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 TLR5O60602 858 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 HUS1O60921 280 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 EGFP01133 1207 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 TNNC2P02585 160 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 KLKB1P03952 638 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 FAM163BP0C2L3 166 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 TNNI1P19237 187 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 CCNE1P24864 410 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 PPIFP30405 207 aaKnown RBP5.08□□□□□ -1.6
SCAF11-214ENST00000550893 ATICP31939 592 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 LHX1P48742 406 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 ALDH9A1P49189 494 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms