RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 ERV3-1Q14264 604 aa11.85□□□□□ -0.51
TRAFD1-205ENST00000548277 IHHQ14623 411 aa11.85□□□□□ -0.51
TRAFD1-205ENST00000548277 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.85□□□□□ -0.51
TRAFD1-205ENST00000548277 LURAP1LQ8IV03 231 aa11.85□□□□□ -0.51
TRAFD1-205ENST00000548277 PSTKQ8IV42 348 aaKnown RBP11.85□□□□□ -0.51
TRAFD1-205ENST00000548277 EXD1Q8NHP7 514 aa11.85□□□□□ -0.51
TRAFD1-205ENST00000548277 APOBEC4Q8WW27 367 aaKnown RBP11.85□□□□□ -0.51
TRAFD1-205ENST00000548277 STARD8Q92502 1023 aa11.85□□□□□ -0.51
TRAFD1-205ENST00000548277 TEFMQ96QE5 360 aaKnown RBP11.85□□□□□ -0.51
TRAFD1-205ENST00000548277 MCCC1Q96RQ3 725 aaPredicted RBP11.85□□□□□ -0.51
TRAFD1-205ENST00000548277 SYT11Q9BT88 431 aa11.85□□□□□ -0.51
TRAFD1-205ENST00000548277 SPRY4Q9C004 299 aa11.85□□□□□ -0.51
TRAFD1-205ENST00000548277 TP53TG5Q9Y2B4 290 aa11.85□□□□□ -0.51
TRAFD1-205ENST00000548277 PTPN13Q12923 2485 aa11.85□□□□□ -0.51
TRAFD1-205ENST00000548277 CACNA1DQ01668 2161 aa11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 MED13Q9UHV7 2174 aa11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 A0A0J9YYE9 177 aa11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 PRR19A6NJB7 356 aa11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 DDX3XO00571 662 aaKnown RBP eCLIP11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 CAPN5O15484 640 aaPredicted RBP11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 DNAJC6O75061 913 aa11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 KATNA1O75449 491 aa11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 TRBC1P01850 177 aa11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 ZNF28P17035 718 aa11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 TYRP1P17643 537 aa11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 F8A1P23610 371 aa11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 GJC1P36383 396 aa11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 NOP2P46087 812 aaKnown RBP11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 FASLGP48023 281 aa11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 MLLT10P55197 1068 aa11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 CDH6P55285 790 aa11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 KRT81Q14533 505 aa11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 PLA2G4EQ3MJ16 856 aa11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 FILIP1LQ4L180 1135 aa11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 LACTB2Q53H82 288 aaPredicted RBP11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 HIST2H2BCQ6DN03 193 aa11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 CAVIN1Q6NZI2 390 aaKnown RBP11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 IYDQ6PHW0 289 aa11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 SLC9B2Q86UD5 537 aa11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 LPCAT1Q8NF37 534 aa11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 BPIFA3Q9BQP9 254 aa11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 OSGEPL1Q9H4B0 414 aa11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 STN1Q9H668 368 aaKnown RBP11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 PCDH18Q9HCL0 1135 aa11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 PRDM8Q9NQV8 689 aa11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 FBXO8Q9NRD0 319 aa11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 RBM22Q9NW64 420 aaKnown RBP eCLIP11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 PDP2Q9P2J9 529 aa11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 TUBD1Q9UJT1 453 aa11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 MYO6Q9UM54 1294 aa11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 PPIL1Q9Y3C6 166 aa11.84□□□□□ -0.51
TRAFD1-205ENST00000548277 CCDC88CQ9P219 2028 aa11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 BLACEA4D250 179 aa11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 FADS2P1A8MWK0 482 aa11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 FZD6O60353 706 aa11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 CD48P09326 243 aa11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 MAN1A1P33908 653 aa11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 DLSTP36957 453 aa11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 ZNF165P49910 485 aa11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 ZNF135P52742 658 aaPredicted RBP11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 STC1P52823 247 aa11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 GFERP55789 205 aa11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 KLHL30Q0D2K2 578 aa11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 ABHD18Q0P651 414 aa11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 SEPT6Q14141 434 aa11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 DPYSL2Q16555 572 aa11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 ATP13A4Q4VNC1 1196 aa11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 BOLA3Q53S33 107 aa11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 CCDC122Q5T0U0 273 aa11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 E4F1Q66K89 784 aaPredicted RBP11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 PPP1R2P3Q6NXS1 205 aa11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 WDR74Q6RFH5 385 aaPredicted RBP11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 TMEM135Q86UB9 458 aa11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 SPOCK2Q92563 424 aa11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 SH3KBP1Q96B97 665 aa11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 COX14Q96I36 57 aa11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 NAP1L5Q96NT1 182 aaPredicted RBP11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 WDR24Q96S15 920 aa11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 EFHD1Q9BUP0 239 aa11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 ULBP3Q9BZM4 244 aa11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 POLR1EQ9GZS1 481 aaKnown RBP11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 MRPL47Q9HD33 250 aaKnown RBP11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 CNOT6Q9ULM6 557 aaKnown RBP11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 MAN2B2Q9Y2E5 1009 aa11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 RPS6KL1Q9Y6S9 549 aa11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 SCINQ9Y6U3 715 aa11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 ICE1Q9Y2F5 2266 aa11.83□□□□□ -0.52
TRAFD1-205ENST00000548277 MAST4O15021 2626 aa11.82□□□□□ -0.52
TRAFD1-205ENST00000548277 C1orf232A0A0U1RR37 186 aa11.82□□□□□ -0.52
TRAFD1-205ENST00000548277 GRID2O43424 1007 aa11.82□□□□□ -0.52
TRAFD1-205ENST00000548277 MFSD11O43934 449 aa11.82□□□□□ -0.52
TRAFD1-205ENST00000548277 PRLP01236 227 aa11.82□□□□□ -0.52
TRAFD1-205ENST00000548277 KRT7P08729 469 aa11.82□□□□□ -0.52
TRAFD1-205ENST00000548277 FURINP09958 794 aa11.82□□□□□ -0.52
TRAFD1-205ENST00000548277 SPTBP11277 2137 aa11.82□□□□□ -0.52
TRAFD1-205ENST00000548277 GP1BBP13224 206 aa11.82□□□□□ -0.52
TRAFD1-205ENST00000548277 ZNF30P17039 623 aa11.82□□□□□ -0.52
TRAFD1-205ENST00000548277 AMD1P17707 334 aa11.82□□□□□ -0.52
TRAFD1-205ENST00000548277 SERPINB6P35237 376 aa11.82□□□□□ -0.52
TRAFD1-205ENST00000548277 PCK1P35558 622 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms