RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	MIF4GD	A9UHW6	222 aa	Known RBP	13.29	□□□□□ -0.28
POLE-222	ENST00000545015		B4DGG1	531 aa		13.29	□□□□□ -0.28
POLE-222	ENST00000545015	PMPCB	O75439	489 aa		13.29	□□□□□ -0.28
POLE-222	ENST00000545015	RPLP0	P05388	317 aa	Known RBP	13.29	□□□□□ -0.28
POLE-222	ENST00000545015	HLA-DPA1	P20036	260 aa		13.29	□□□□□ -0.28
POLE-222	ENST00000545015	AK4	P27144	223 aa	Predicted RBP	13.29	□□□□□ -0.28
POLE-222	ENST00000545015	CETN2	P41208	172 aa		13.29	□□□□□ -0.28
POLE-222	ENST00000545015	GPR3	P46089	330 aa		13.29	□□□□□ -0.28
POLE-222	ENST00000545015	CLCNKA	P51800	687 aa		13.29	□□□□□ -0.28
POLE-222	ENST00000545015	NAP1L1	P55209	391 aa	Known RBP	13.29	□□□□□ -0.28
POLE-222	ENST00000545015	GABRE	P78334	506 aa		13.29	□□□□□ -0.28
POLE-222	ENST00000545015	CCL7	P80098	99 aa		13.29	□□□□□ -0.28
POLE-222	ENST00000545015	B4GALNT1	Q00973	533 aa		13.29	□□□□□ -0.28
POLE-222	ENST00000545015	ZFP36L1	Q07352	338 aa	Known RBP	13.29	□□□□□ -0.28
POLE-222	ENST00000545015	KIF5A	Q12840	1032 aa		13.29	□□□□□ -0.28
POLE-222	ENST00000545015	EIF3I	Q13347	325 aa	Known RBP	13.29	□□□□□ -0.28
POLE-222	ENST00000545015	SQSTM1	Q13501	440 aa		13.29	□□□□□ -0.28
POLE-222	ENST00000545015	PCSK7	Q16549	785 aa		13.29	□□□□□ -0.28
POLE-222	ENST00000545015	FAM182A	Q5T1J6	154 aa		13.29	□□□□□ -0.28
POLE-222	ENST00000545015	DOK6	Q6PKX4	331 aa		13.29	□□□□□ -0.28
POLE-222	ENST00000545015	KIAA1328	Q86T90	577 aa		13.29	□□□□□ -0.28
POLE-222	ENST00000545015	TRIM74	Q86UV6	250 aa		13.29	□□□□□ -0.28
POLE-222	ENST00000545015	GALNT13	Q8IUC8	556 aa		13.29	□□□□□ -0.28
POLE-222	ENST00000545015	SFTPA2	Q8IWL1	248 aa		13.29	□□□□□ -0.28
POLE-222	ENST00000545015	KLHDC8B	Q8IXV7	354 aa		13.29	□□□□□ -0.28
POLE-222	ENST00000545015	NAGS	Q8N159	534 aa		13.29	□□□□□ -0.28
POLE-222	ENST00000545015	RNF10	Q8N5U6	811 aa	Known RBP	13.29	□□□□□ -0.28
POLE-222	ENST00000545015	WDR36	Q8NI36	951 aa	Known RBP	13.29	□□□□□ -0.28
POLE-222	ENST00000545015	ZDHHC1	Q8WTX9	485 aa		13.29	□□□□□ -0.28
POLE-222	ENST00000545015	HAUS1	Q96CS2	278 aa		13.29	□□□□□ -0.28
POLE-222	ENST00000545015	ATXN7L3B	Q96GX2	97 aa		13.29	□□□□□ -0.28
POLE-222	ENST00000545015	TMEM74	Q96NL1	305 aa		13.29	□□□□□ -0.28
POLE-222	ENST00000545015	GFM1	Q96RP9	751 aa	Known RBP	13.29	□□□□□ -0.28
POLE-222	ENST00000545015	FERMT1	Q9BQL6	677 aa		13.29	□□□□□ -0.28
POLE-222	ENST00000545015	GPR63	Q9BZJ6	419 aa		13.29	□□□□□ -0.28
POLE-222	ENST00000545015	HACD3	Q9P035	362 aa		13.29	□□□□□ -0.28
POLE-222	ENST00000545015	AMFR	Q9UKV5	643 aa		13.29	□□□□□ -0.28
POLE-222	ENST00000545015	SPO11	Q9Y5K1	396 aa		13.29	□□□□□ -0.28
POLE-222	ENST00000545015	ADGRG1	Q9Y653	693 aa		13.29	□□□□□ -0.28
POLE-222	ENST00000545015	OAS3	Q9Y6K5	1087 aa	Known RBP	13.29	□□□□□ -0.28
POLE-222	ENST00000545015	CCDC187	A0A096LP49	1063 aa		13.28	□□□□□ -0.28
POLE-222	ENST00000545015	CHUK	O15111	745 aa		13.28	□□□□□ -0.28
POLE-222	ENST00000545015	CASC3	O15234	703 aa	Known RBP	13.28	□□□□□ -0.28
POLE-222	ENST00000545015	INPP4B	O15327	924 aa		13.28	□□□□□ -0.28
POLE-222	ENST00000545015	ZW10	O43264	779 aa		13.28	□□□□□ -0.28
POLE-222	ENST00000545015	NUAK1	O60285	661 aa		13.28	□□□□□ -0.28
POLE-222	ENST00000545015	TJP3	O95049	919 aa		13.28	□□□□□ -0.28
POLE-222	ENST00000545015	MPO	P05164	745 aa		13.28	□□□□□ -0.28
POLE-222	ENST00000545015	PIRT	P0C851	137 aa		13.28	□□□□□ -0.28
POLE-222	ENST00000545015	PYGM	P11217	842 aa		13.28	□□□□□ -0.28
POLE-222	ENST00000545015	BPI	P17213	487 aa		13.28	□□□□□ -0.28
POLE-222	ENST00000545015	RBL1	P28749	1068 aa		13.28	□□□□□ -0.28
POLE-222	ENST00000545015	ACTR1B	P42025	376 aa		13.28	□□□□□ -0.28
POLE-222	ENST00000545015	FASLG	P48023	281 aa		13.28	□□□□□ -0.28
POLE-222	ENST00000545015	ACTR1A	P61163	376 aa		13.28	□□□□□ -0.28
POLE-222	ENST00000545015	OTUD4	Q01804	1114 aa	Known RBP	13.28	□□□□□ -0.28
POLE-222	ENST00000545015	SLC1A5	Q15758	541 aa		13.28	□□□□□ -0.28
POLE-222	ENST00000545015	ZDHHC20	Q5W0Z9	365 aa		13.28	□□□□□ -0.28
POLE-222	ENST00000545015	SLC30A9	Q6PML9	568 aa		13.28	□□□□□ -0.28
POLE-222	ENST00000545015	KDELC2	Q7Z4H8	507 aa		13.28	□□□□□ -0.28
POLE-222	ENST00000545015	CDKL3	Q8IVW4	592 aa	Predicted RBP	13.28	□□□□□ -0.28
POLE-222	ENST00000545015	ARL14	Q8N4G2	192 aa		13.28	□□□□□ -0.28
POLE-222	ENST00000545015	TTC30B	Q8N4P2	665 aa		13.28	□□□□□ -0.28
POLE-222	ENST00000545015	GLYATL1	Q969I3	302 aa		13.28	□□□□□ -0.28
POLE-222	ENST00000545015	SLC46A1	Q96NT5	459 aa		13.28	□□□□□ -0.28
POLE-222	ENST00000545015	VPS35	Q96QK1	796 aa		13.28	□□□□□ -0.28
POLE-222	ENST00000545015	GORASP1	Q9BQQ3	440 aa		13.28	□□□□□ -0.28
POLE-222	ENST00000545015	GBA3	Q9H227	469 aa		13.28	□□□□□ -0.28
POLE-222	ENST00000545015	TRIM39	Q9HCM9	518 aa		13.28	□□□□□ -0.28
POLE-222	ENST00000545015	UBP1	Q9NZI7	540 aa		13.28	□□□□□ -0.28
POLE-222	ENST00000545015	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
POLE-222	ENST00000545015	LHX6	Q9UPM6	363 aa		13.28	□□□□□ -0.28
POLE-222	ENST00000545015	SATB2	Q9UPW6	733 aa		13.28	□□□□□ -0.28
POLE-222	ENST00000545015	SHOC2	Q9UQ13	582 aa		13.28	□□□□□ -0.28
POLE-222	ENST00000545015		A6NCN8	305 aa		13.27	□□□□□ -0.29
POLE-222	ENST00000545015	PRR19	A6NJB7	356 aa		13.27	□□□□□ -0.29
POLE-222	ENST00000545015	CDRT15L2	A8MXV6	281 aa		13.27	□□□□□ -0.29
POLE-222	ENST00000545015		H7C0C1	242 aa		13.27	□□□□□ -0.29
POLE-222	ENST00000545015	AURKA	O14965	403 aa		13.27	□□□□□ -0.29
POLE-222	ENST00000545015	DDX3Y	O15523	660 aa	Known RBP	13.27	□□□□□ -0.29
POLE-222	ENST00000545015	RRP8	O43159	456 aa	Known RBP	13.27	□□□□□ -0.29
POLE-222	ENST00000545015	B4GAT1	O43505	415 aa		13.27	□□□□□ -0.29
POLE-222	ENST00000545015	PPFIA2	O75334	1257 aa		13.27	□□□□□ -0.29
POLE-222	ENST00000545015	ANXA9	O76027	345 aa		13.27	□□□□□ -0.29
POLE-222	ENST00000545015	ECEL1	O95672	775 aa		13.27	□□□□□ -0.29
POLE-222	ENST00000545015	ATP1A1	P05023	1023 aa	Known RBP	13.27	□□□□□ -0.29
POLE-222	ENST00000545015	RBP3	P10745	1247 aa		13.27	□□□□□ -0.29
POLE-222	ENST00000545015	ATP5O	P48047	213 aa		13.27	□□□□□ -0.29
POLE-222	ENST00000545015	GEM	P55040	296 aa		13.27	□□□□□ -0.29
POLE-222	ENST00000545015	INHBC	P55103	352 aa		13.27	□□□□□ -0.29
POLE-222	ENST00000545015	MAZ	P56270	477 aa	Known RBP	13.27	□□□□□ -0.29
POLE-222	ENST00000545015	GSDMD	P57764	484 aa		13.27	□□□□□ -0.29
POLE-222	ENST00000545015	KLF1	Q13351	362 aa	Predicted RBP	13.27	□□□□□ -0.29
POLE-222	ENST00000545015	SIRPB2	Q5JXA9	342 aa		13.27	□□□□□ -0.29
POLE-222	ENST00000545015	ZNF569	Q5MCW4	686 aa		13.27	□□□□□ -0.29
POLE-222	ENST00000545015	CCDC181	Q5TID7	509 aa		13.27	□□□□□ -0.29
POLE-222	ENST00000545015	ITPRIPL1	Q6GPH6	555 aa		13.27	□□□□□ -0.29
POLE-222	ENST00000545015	PEX26	Q7Z412	305 aa		13.27	□□□□□ -0.29
POLE-222	ENST00000545015	B3GNT8	Q7Z7M8	397 aa		13.27	□□□□□ -0.29
POLE-222	ENST00000545015	CLEC14A	Q86T13	490 aa		13.27	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 20 ms