RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 OR13C4Q8NGS5 318 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 HM13Q8TCT9 377 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 ATP6V1E2Q96A05 226 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 FUBP1Q96AE4 644 aaKnown RBP12.39□□□□□ -0.43
PAAF1-215ENST00000544909 MYRFLQ96LU7 910 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 ZNF382Q96SR6 550 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 TTPALQ9BTX7 342 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 UNKQ9C0B0 810 aaKnown RBP12.39□□□□□ -0.43
PAAF1-215ENST00000544909 ACSS2Q9NR19 701 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 PNPLA3Q9NST1 481 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 STOML2Q9UJZ1 356 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 MED16Q9Y2X0 877 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 PCDHB7Q9Y5E2 793 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 PCDHB1Q9Y5F3 818 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 BACE2Q9Y5Z0 518 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 OR51F1A6NGY5 319 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 TMEM88BA6NKF7 163 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 SLC38A8A6NNN8 435 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 H3BMM5 538 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 UBXN8O00124 270 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 FXYD1O00168 92 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 MAP3K13O43283 966 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 EEDO75530 441 aaKnown RBP12.39□□□□□ -0.43
PAAF1-215ENST00000544909 PKMP14618 531 aaKnown RBP12.39□□□□□ -0.43
PAAF1-215ENST00000544909 PSMA4P25789 261 aaKnown RBP12.39□□□□□ -0.43
PAAF1-215ENST00000544909 LSAMPQ13449 338 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 BFSP2Q13515 415 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 SEMA3AQ14563 771 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 GEN1Q17RS7 908 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 LRRC8DQ7L1W4 858 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 CAMK1DQ8IU85 385 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 REM2Q8IYK8 340 aaPredicted RBP12.39□□□□□ -0.43
PAAF1-215ENST00000544909 OR56A4Q8NGH8 313 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 C3orf30Q96M34 536 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 CASD1Q96PB1 797 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 SEPT5Q99719 369 aaPredicted RBP12.39□□□□□ -0.43
PAAF1-215ENST00000544909 GPR62Q9BZJ7 368 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 SLC52A3Q9NQ40 469 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 AIG1Q9NVV5 245 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 TUBA8Q9NY65 449 aaPredicted RBP12.39□□□□□ -0.43
PAAF1-215ENST00000544909 UBAP1Q9NZ09 502 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 POLG2Q9UHN1 485 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 LZTS1Q9Y250 596 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 FIS1Q9Y3D6 152 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 KCTD3Q9Y597 815 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 GPR45Q9Y5Y3 372 aa12.39□□□□□ -0.43
PAAF1-215ENST00000544909 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.38□□□□□ -0.43
PAAF1-215ENST00000544909 SUPT3HB4E1H0 165 aa12.38□□□□□ -0.43
PAAF1-215ENST00000544909 SUPT3HO75486 399 aa12.38□□□□□ -0.43
PAAF1-215ENST00000544909 UPP2O95045 317 aa12.38□□□□□ -0.43
PAAF1-215ENST00000544909 VNN2O95498 520 aa12.38□□□□□ -0.43
PAAF1-215ENST00000544909 CYBBP04839 570 aa12.38□□□□□ -0.43
PAAF1-215ENST00000544909 IL10P22301 178 aa12.38□□□□□ -0.43
PAAF1-215ENST00000544909 HOXD10P28358 340 aa12.38□□□□□ -0.43
PAAF1-215ENST00000544909 POLE2P56282 527 aa12.38□□□□□ -0.43
PAAF1-215ENST00000544909 EEFSECP57772 596 aaKnown RBP12.38□□□□□ -0.43
PAAF1-215ENST00000544909 IL2P60568 153 aa12.38□□□□□ -0.43
PAAF1-215ENST00000544909 ERVK-8P63133 956 aa12.38□□□□□ -0.43
PAAF1-215ENST00000544909 ZNF177Q13360 481 aaPredicted RBP12.38□□□□□ -0.43
PAAF1-215ENST00000544909 GALNT3Q14435 633 aa12.38□□□□□ -0.43
PAAF1-215ENST00000544909 RPS6KA2Q15349 733 aa12.38□□□□□ -0.43
PAAF1-215ENST00000544909 HECTD3Q5T447 861 aa12.38□□□□□ -0.43
PAAF1-215ENST00000544909 THEMIS2Q5TEJ8 643 aa12.38□□□□□ -0.43
PAAF1-215ENST00000544909 IL31Q6EBC2 164 aa12.38□□□□□ -0.43
PAAF1-215ENST00000544909 FKBP9P1Q75LS8 142 aa12.38□□□□□ -0.43
PAAF1-215ENST00000544909 ADAMTSL2Q86TH1 951 aa12.38□□□□□ -0.43
PAAF1-215ENST00000544909 CARNMT1Q8N4J0 409 aa12.38□□□□□ -0.43
PAAF1-215ENST00000544909 TTC9BQ8N6N2 239 aa12.38□□□□□ -0.43
PAAF1-215ENST00000544909 RNF148Q8N7C7 305 aa12.38□□□□□ -0.43
PAAF1-215ENST00000544909 PXYLP1Q8TE99 480 aa12.38□□□□□ -0.43
PAAF1-215ENST00000544909 TUBGCP3Q96CW5 907 aa12.38□□□□□ -0.43
PAAF1-215ENST00000544909 TRMT2BQ96GJ1 504 aaKnown RBP12.38□□□□□ -0.43
PAAF1-215ENST00000544909 BIRC8Q96P09 236 aa12.38□□□□□ -0.43
PAAF1-215ENST00000544909 RBM38Q9H0Z9 239 aaKnown RBP12.38□□□□□ -0.43
PAAF1-215ENST00000544909 CCSER2Q9H7U1 834 aa12.38□□□□□ -0.43
PAAF1-215ENST00000544909 CD320Q9NPF0 282 aa12.38□□□□□ -0.43
PAAF1-215ENST00000544909 SCUBE2Q9NQ36 999 aa12.38□□□□□ -0.43
PAAF1-215ENST00000544909 NUDT4Q9NZJ9 180 aa12.38□□□□□ -0.43
PAAF1-215ENST00000544909 TRMT6Q9UJA5 497 aaKnown RBP12.38□□□□□ -0.43
PAAF1-215ENST00000544909 PCTPQ9UKL6 214 aa12.38□□□□□ -0.43
PAAF1-215ENST00000544909 AGO1Q9UL18 857 aaKnown RBP12.38□□□□□ -0.43
PAAF1-215ENST00000544909 PHF24Q9UPV7 400 aa12.38□□□□□ -0.43
PAAF1-215ENST00000544909 DHRS12A0PJE2 317 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 TTC24A2A3L6 582 aaPredicted RBP12.37□□□□□ -0.43
PAAF1-215ENST00000544909 ANKRD66B4E2M5 251 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 PITPNM1O00562 1244 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 ECI2O75521 394 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 TSPAN12O95859 305 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 PRLP01236 227 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 SLC4A1P02730 911 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 HGFP14210 728 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 RPS3P23396 243 aaKnown RBP eCLIP12.37□□□□□ -0.43
PAAF1-215ENST00000544909 SLC6A2P23975 617 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 EEF1DP29692 281 aaKnown RBP12.37□□□□□ -0.43
PAAF1-215ENST00000544909 GRIA2P42262 883 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 KCNK10P57789 538 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 MYBPC1Q00872 1141 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 TRIM32Q13049 653 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 SETMARQ53H47 684 aaPredicted RBP12.37□□□□□ -0.43
PAAF1-215ENST00000544909 ADGRF1Q5T601 910 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms