RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 IL26Q9NPH9 171 aa17.75■□□□□ 0.43
TSFM-208ENST00000543727 CNOT6Q9ULM6 557 aaKnown RBP17.75■□□□□ 0.43
TSFM-208ENST00000543727 DOLKQ9UPQ8 538 aa17.75■□□□□ 0.43
TSFM-208ENST00000543727 ARL5AQ9Y689 179 aa17.75■□□□□ 0.43
TSFM-208ENST00000543727 GLYATL1P3A0A0U1RQE8 302 aa17.74■□□□□ 0.43
TSFM-208ENST00000543727 GIPC1O14908 333 aa17.74■□□□□ 0.43
TSFM-208ENST00000543727 ZNF185O15231 689 aa17.74■□□□□ 0.43
TSFM-208ENST00000543727 VEGFDO43915 354 aa17.74■□□□□ 0.43
TSFM-208ENST00000543727 DKK1O94907 266 aa17.74■□□□□ 0.43
TSFM-208ENST00000543727 SLC25A14O95258 325 aaPredicted RBP17.74■□□□□ 0.43
TSFM-208ENST00000543727 ETS1P14921 441 aa17.74■□□□□ 0.43
TSFM-208ENST00000543727 CKMT2P17540 419 aa17.74■□□□□ 0.43
TSFM-208ENST00000543727 TPSB2P20231 275 aa17.74■□□□□ 0.43
TSFM-208ENST00000543727 ACP1P24666 158 aa17.74■□□□□ 0.43
TSFM-208ENST00000543727 KCNJ1P48048 391 aa17.74■□□□□ 0.43
TSFM-208ENST00000543727 RPIAP49247 311 aa17.74■□□□□ 0.43
TSFM-208ENST00000543727 ZNF140P52738 457 aaPredicted RBP17.74■□□□□ 0.43
TSFM-208ENST00000543727 ILF3Q12906 894 aaKnown RBP eCLIP17.74■□□□□ 0.43
TSFM-208ENST00000543727 SPARCL1Q14515 664 aa17.74■□□□□ 0.43
TSFM-208ENST00000543727 TPSAB1Q15661 275 aa17.74■□□□□ 0.43
TSFM-208ENST00000543727 PROX2Q3B8N5 592 aa17.74■□□□□ 0.43
TSFM-208ENST00000543727 C6orf132Q5T0Z8 1188 aa17.74■□□□□ 0.43
TSFM-208ENST00000543727 ALS2CLQ60I27 953 aa17.74■□□□□ 0.43
TSFM-208ENST00000543727 PPP1R21Q6ZMI0 780 aa17.74■□□□□ 0.43
TSFM-208ENST00000543727 DNAAF3Q8N9W5 541 aa17.74■□□□□ 0.43
TSFM-208ENST00000543727 GLIS1Q8NBF1 620 aa17.74■□□□□ 0.43
TSFM-208ENST00000543727 SLCO2A1Q92959 643 aa17.74■□□□□ 0.43
TSFM-208ENST00000543727 BOCQ9BWV1 1114 aa17.74■□□□□ 0.43
TSFM-208ENST00000543727 ZCCHC2Q9C0B9 1178 aaKnown RBP17.74■□□□□ 0.43
TSFM-208ENST00000543727 CARS2Q9HA77 564 aaKnown RBP17.74■□□□□ 0.43
TSFM-208ENST00000543727 TRIM39Q9HCM9 518 aa17.74■□□□□ 0.43
TSFM-208ENST00000543727 RIMKLBQ9ULI2 386 aa17.74■□□□□ 0.43
TSFM-208ENST00000543727 SUFUQ9UMX1 484 aa17.74■□□□□ 0.43
TSFM-208ENST00000543727 H7C0S8 307 aa17.73■□□□□ 0.43
TSFM-208ENST00000543727 TRIM38O00635 465 aa17.73■□□□□ 0.43
TSFM-208ENST00000543727 INPP4BO15327 924 aa17.73■□□□□ 0.43
TSFM-208ENST00000543727 FFAR2O15552 330 aa17.73■□□□□ 0.43
TSFM-208ENST00000543727 LDB2O43679 373 aa17.73■□□□□ 0.43
TSFM-208ENST00000543727 SIGLEC6O43699 453 aa17.73■□□□□ 0.43
TSFM-208ENST00000543727 ADRB1P08588 477 aa17.73■□□□□ 0.43
TSFM-208ENST00000543727 CKMT1AP12532 417 aa17.73■□□□□ 0.43
TSFM-208ENST00000543727 PAFAH1B1P43034 410 aa17.73■□□□□ 0.43
TSFM-208ENST00000543727 MAGEA6P43360 314 aa17.73■□□□□ 0.43
TSFM-208ENST00000543727 BASP1P80723 227 aaKnown RBP17.73■□□□□ 0.43
TSFM-208ENST00000543727 SARNPP82979 210 aaKnown RBP17.73■□□□□ 0.43
TSFM-208ENST00000543727 OLIG2Q13516 323 aa17.73■□□□□ 0.43
TSFM-208ENST00000543727 TTC27Q6P3X3 843 aa17.73■□□□□ 0.43
TSFM-208ENST00000543727 NLRP9Q7RTR0 991 aa17.73■□□□□ 0.43
TSFM-208ENST00000543727 RD3Q7Z3Z2 195 aa17.73■□□□□ 0.43
TSFM-208ENST00000543727 GALNT13Q8IUC8 556 aa17.73■□□□□ 0.43
TSFM-208ENST00000543727 GPBAR1Q8TDU6 330 aa17.73■□□□□ 0.43
TSFM-208ENST00000543727 STYXQ8WUJ0 223 aa17.73■□□□□ 0.43
TSFM-208ENST00000543727 RANBP9Q96S59 729 aa17.73■□□□□ 0.43
TSFM-208ENST00000543727 GSDMCQ9BYG8 508 aa17.73■□□□□ 0.43
TSFM-208ENST00000543727 CLPBQ9H078 707 aa17.73■□□□□ 0.43
TSFM-208ENST00000543727 TCEAL2Q9H3H9 227 aaPredicted RBP17.73■□□□□ 0.43
TSFM-208ENST00000543727 BPIFA1Q9NP55 256 aa17.73■□□□□ 0.43
TSFM-208ENST00000543727 MRPL40Q9NQ50 206 aaKnown RBP17.73■□□□□ 0.43
TSFM-208ENST00000543727 CASS4Q9NQ75 786 aa17.73■□□□□ 0.43
TSFM-208ENST00000543727 PCYOX1Q9UHG3 505 aa17.73■□□□□ 0.43
TSFM-208ENST00000543727 ARHGEF17Q96PE2 2063 aaPredicted RBP17.73■□□□□ 0.43
TSFM-208ENST00000543727 GOLGA4Q13439 2230 aaKnown RBP17.72■□□□□ 0.43
TSFM-208ENST00000543727 PTPRBP23467 1997 aa17.72■□□□□ 0.43
TSFM-208ENST00000543727 SPAARA0A1B0GVQ0 90 aa17.72■□□□□ 0.43
TSFM-208ENST00000543727 HEATR9A2RTY3 570 aa17.72■□□□□ 0.43
TSFM-208ENST00000543727 CCDC188H7C350 402 aa17.72■□□□□ 0.43
TSFM-208ENST00000543727 YY2O15391 372 aa17.72■□□□□ 0.43
TSFM-208ENST00000543727 PRAMEF1O95521 474 aa17.72■□□□□ 0.43
TSFM-208ENST00000543727 ASMTLO95671 621 aa17.72■□□□□ 0.43
TSFM-208ENST00000543727 ECEL1O95672 775 aa17.72■□□□□ 0.43
TSFM-208ENST00000543727 KRT14P02533 472 aa17.72■□□□□ 0.43
TSFM-208ENST00000543727 GP1BAP07359 652 aa17.72■□□□□ 0.43
TSFM-208ENST00000543727 FTH1P19P0C7X4 201 aa17.72■□□□□ 0.43
TSFM-208ENST00000543727 ZSCAN5DPP0CG00 497 aa17.72■□□□□ 0.43
TSFM-208ENST00000543727 KCNA4P22459 653 aa17.72■□□□□ 0.43
TSFM-208ENST00000543727 PSMA3P25788 255 aa17.72■□□□□ 0.43
TSFM-208ENST00000543727 PYCR3Q53H96 274 aa17.72■□□□□ 0.43
TSFM-208ENST00000543727 LDLRAP1Q5SW96 308 aa17.72■□□□□ 0.43
TSFM-208ENST00000543727 CREG2Q8IUH2 290 aa17.72■□□□□ 0.43
TSFM-208ENST00000543727 OR4K2Q8NGD2 314 aa17.72■□□□□ 0.43
TSFM-208ENST00000543727 OR2M4Q96R27 311 aa17.72■□□□□ 0.43
TSFM-208ENST00000543727 NLE1Q9NVX2 485 aaPredicted RBP17.72■□□□□ 0.43
TSFM-208ENST00000543727 TOR4AQ9NXH8 423 aa17.72■□□□□ 0.43
TSFM-208ENST00000543727 MOSPD1Q9UJG1 213 aa17.72■□□□□ 0.43
TSFM-208ENST00000543727 NEU2Q9Y3R4 380 aa17.72■□□□□ 0.43
TSFM-208ENST00000543727 MROH6A6NGR9 719 aa17.71■□□□□ 0.43
TSFM-208ENST00000543727 AGAP14A8MT82 685 aa17.71■□□□□ 0.43
TSFM-208ENST00000543727 NUAK1O60285 661 aa17.71■□□□□ 0.43
TSFM-208ENST00000543727 DNAJC6O75061 913 aa17.71■□□□□ 0.43
TSFM-208ENST00000543727 SRP72O76094 671 aaKnown RBP17.71■□□□□ 0.43
TSFM-208ENST00000543727 TUBB4AP04350 444 aa17.71■□□□□ 0.43
TSFM-208ENST00000543727 CASQ1P31415 396 aa17.71■□□□□ 0.43
TSFM-208ENST00000543727 GNPDA1P46926 289 aa17.71■□□□□ 0.43
TSFM-208ENST00000543727 ACADVLP49748 655 aa17.71■□□□□ 0.43
TSFM-208ENST00000543727 DAB2P98082 770 aa17.71■□□□□ 0.43
TSFM-208ENST00000543727 GPS1Q13098 491 aa17.71■□□□□ 0.43
TSFM-208ENST00000543727 SKIDA1Q1XH10 827 aa17.71■□□□□ 0.43
TSFM-208ENST00000543727 DEFB133Q30KQ1 61 aa17.71■□□□□ 0.43
TSFM-208ENST00000543727 ATP13A5Q4VNC0 1218 aa17.71■□□□□ 0.43
TSFM-208ENST00000543727 N4BP2L1Q5TBK1 243 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms