RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 CAPN15O75808 1086 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 MED26O95402 600 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 GSNP06396 782 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 CDH3P22223 829 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 CAPGP40121 348 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 MLLT6P55198 1093 aaPredicted RBP8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 ACSM2AQ08AH3 577 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 BOP1Q14137 746 aaKnown RBP8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 CRY1Q16526 586 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 INTS11Q5TA45 600 aaKnown RBP8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 ACSM2BQ68CK6 577 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 NAPRTQ6XQN6 538 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 TP53INP2Q8IXH6 220 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 TRPV3Q8NET8 790 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 RAET1EQ8TD07 263 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 TM6SF2Q9BZW4 377 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 FBRSL1Q9HCM7 1045 aaKnown RBP8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 PALMDQ9NP74 551 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 CIDEBQ9UHD4 219 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 CNOT6Q9ULM6 557 aaKnown RBP8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 DOLKQ9UPQ8 538 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 ECM29Q5VYK3 1845 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 NPEPPSL1A6NEC2 478 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 SDHDO14521 159 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 DCLK1O15075 740 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 SORBS2O94875 1100 aaKnown RBP8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 EPN2O95208 641 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 NTRK1P04629 796 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 SLC35E2BP0CK96 405 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 FCGRTP55899 365 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 SLC10A7Q0GE19 358 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 LSAMPQ13449 338 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 FAM110CQ1W6H9 321 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 OGFRL1Q5TC84 451 aaPredicted RBP8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 FAM117BQ6P1L5 589 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 CRTC3Q6UUV7 619 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 KCTD8Q6ZWB6 473 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 GPR180Q86V85 440 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 DENND1CQ8IV53 801 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 ZNF540Q8NDQ6 660 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 MZB1Q8WU39 189 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 ARNTL2Q8WYA1 636 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 ADPRHL2Q9NX46 363 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 GMIPQ9P107 970 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 PADI3Q9ULW8 664 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 POLR3HQ9Y535 204 aaPredicted RBP8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 COL4A1P02462 1669 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 LINC00854A0A1B0GVQ3 168 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 SLC28A1O00337 649 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 GABRDO14764 452 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 DENRO43583 198 aaKnown RBP8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 BEST1O76090 585 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 OR4F21O95013 312 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 SEC24AO95486 1093 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 IFNA14P01570 189 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 HDCP19113 662 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 GNPDA1P46926 289 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 TRAF3Q13114 568 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 ITGA7Q13683 1181 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 RFTN1Q14699 578 aaPredicted RBP8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 ZBED5Q49AG3 693 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 NOMO2Q5JPE7 1267 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 HECTD3Q5T447 861 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 PAQR3Q6TCH7 311 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 IFNLR1Q8IU57 520 aaPredicted RBP8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 SYT12Q8IV01 421 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 BBS7Q8IWZ6 715 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 PACRGLQ8N7B6 248 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 OLIG1Q8TAK6 271 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 SOCS4Q8WXH5 440 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 MRPS31Q92665 395 aaKnown RBP8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 CEP44Q9C0F1 390 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 TMCC3Q9ULS5 477 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 SNX6Q9UNH7 406 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 CCDC162PA2VCL2 907 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 MTHFD1P11586 935 aaKnown RBP8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 CES1P23141 567 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 JAK1P23458 1154 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 RRM2P31350 389 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 IDH2P48735 452 aaKnown RBP8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 IRF8Q02556 426 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 PRKCQQ04759 706 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 SPIDRQ14159 915 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 PNPT1Q8TCS8 783 aaKnown RBP8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 CENPIQ92674 756 aaPredicted RBP8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 POP5Q969H6 163 aaKnown RBP8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 SORT1Q99523 831 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 TFB2MQ9H5Q4 396 aaKnown RBP8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 LIN28AQ9H9Z2 209 aaKnown RBP8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 ACTR3BQ9P1U1 418 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 SH3GLB1Q9Y371 365 aa8.16□□□□□ -1.1
PRKAB1-207ENST00000542698 ZCWPW2A0A1B0GU75 182 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 MOXD2PA6NHM9 499 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 HOXA2O43364 376 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 ZBTB11O95625 1053 aaPredicted RBP8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 CAPN1P07384 714 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 ABCB1P08183 1280 aaPredicted RBP8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 PFKMP08237 780 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 OR56A5P0C7T3 313 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 CYP2A7P20853 494 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms