RNA–Protein interactions for RNA: ENST00000540987.1

POLE-215, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 3

Gene POLE, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-215	ENST00000540987	CCDC66	A2RUB6	948 aa		13.53	□□□□□ -0.24
POLE-215	ENST00000540987	RGSL1	A5PLK6	1076 aa		13.53	□□□□□ -0.24
POLE-215	ENST00000540987	MTSS1	O43312	755 aa		13.53	□□□□□ -0.24
POLE-215	ENST00000540987	DXO	O77932	396 aa	Known RBP	13.53	□□□□□ -0.24
POLE-215	ENST00000540987	GLB1	P16278	677 aa		13.53	□□□□□ -0.24
POLE-215	ENST00000540987	RBL1	P28749	1068 aa		13.53	□□□□□ -0.24
POLE-215	ENST00000540987	ACTR1B	P42025	376 aa		13.53	□□□□□ -0.24
POLE-215	ENST00000540987	LSS	P48449	732 aa		13.53	□□□□□ -0.24
POLE-215	ENST00000540987	ACTR1A	P61163	376 aa		13.53	□□□□□ -0.24
POLE-215	ENST00000540987	OTUD4	Q01804	1114 aa	Known RBP	13.53	□□□□□ -0.24
POLE-215	ENST00000540987	ZNF648	Q5T619	568 aa	Predicted RBP	13.53	□□□□□ -0.24
POLE-215	ENST00000540987	ZNF438	Q7Z4V0	828 aa		13.53	□□□□□ -0.24
POLE-215	ENST00000540987	TMC3	Q7Z5M5	1100 aa		13.53	□□□□□ -0.24
POLE-215	ENST00000540987	GALNT13	Q8IUC8	556 aa		13.53	□□□□□ -0.24
POLE-215	ENST00000540987	NAGS	Q8N159	534 aa		13.53	□□□□□ -0.24
POLE-215	ENST00000540987	TTC30B	Q8N4P2	665 aa		13.53	□□□□□ -0.24
POLE-215	ENST00000540987		Q8N9G6	341 aa	Predicted RBP	13.53	□□□□□ -0.24
POLE-215	ENST00000540987	WDR48	Q8TAF3	677 aa		13.53	□□□□□ -0.24
POLE-215	ENST00000540987	KIAA1524	Q8TCG1	905 aa		13.53	□□□□□ -0.24
POLE-215	ENST00000540987	CCHCR1	Q8TD31	782 aa		13.53	□□□□□ -0.24
POLE-215	ENST00000540987	ZDHHC1	Q8WTX9	485 aa		13.53	□□□□□ -0.24
POLE-215	ENST00000540987	HNRNPLL	Q8WVV9	542 aa	Known RBP	13.53	□□□□□ -0.24
POLE-215	ENST00000540987	PRR11	Q96HE9	360 aa	Predicted RBP	13.53	□□□□□ -0.24
POLE-215	ENST00000540987	FCRL5	Q96RD9	977 aa		13.53	□□□□□ -0.24
POLE-215	ENST00000540987	GFM1	Q96RP9	751 aa	Known RBP	13.53	□□□□□ -0.24
POLE-215	ENST00000540987	LRRN3	Q9H3W5	708 aa		13.53	□□□□□ -0.24
POLE-215	ENST00000540987	POLR1B	Q9H9Y6	1135 aa		13.53	□□□□□ -0.24
POLE-215	ENST00000540987	ARFGAP3	Q9NP61	516 aa		13.53	□□□□□ -0.24
POLE-215	ENST00000540987	VPS18	Q9P253	973 aa		13.53	□□□□□ -0.24
POLE-215	ENST00000540987	APPL1	Q9UKG1	709 aa		13.53	□□□□□ -0.24
POLE-215	ENST00000540987	PACSIN2	Q9UNF0	486 aa	Predicted RBP	13.53	□□□□□ -0.24
POLE-215	ENST00000540987	PRKAB1	Q9Y478	270 aa		13.53	□□□□□ -0.24
POLE-215	ENST00000540987	CAPN6	Q9Y6Q1	641 aa		13.53	□□□□□ -0.24
POLE-215	ENST00000540987	LOC285095	A0A1B0GVY8	99 aa		13.52	□□□□□ -0.25
POLE-215	ENST00000540987		H7C0C1	242 aa		13.52	□□□□□ -0.25
POLE-215	ENST00000540987	DDX3Y	O15523	660 aa	Known RBP	13.52	□□□□□ -0.25
POLE-215	ENST00000540987	NUDT21	O43809	227 aa	Known RBP	13.52	□□□□□ -0.25
POLE-215	ENST00000540987	ASMTL	O95671	621 aa		13.52	□□□□□ -0.25
POLE-215	ENST00000540987	ECEL1	O95672	775 aa		13.52	□□□□□ -0.25
POLE-215	ENST00000540987	EML2	O95834	649 aa		13.52	□□□□□ -0.25
POLE-215	ENST00000540987	FTCD	O95954	541 aa		13.52	□□□□□ -0.25
POLE-215	ENST00000540987	PYGM	P11217	842 aa		13.52	□□□□□ -0.25
POLE-215	ENST00000540987	BPI	P17213	487 aa		13.52	□□□□□ -0.25
POLE-215	ENST00000540987	ITPKB	P27987	946 aa		13.52	□□□□□ -0.25
POLE-215	ENST00000540987	EIF2S3	P41091	472 aa	Known RBP	13.52	□□□□□ -0.25
POLE-215	ENST00000540987	ATP5O	P48047	213 aa		13.52	□□□□□ -0.25
POLE-215	ENST00000540987	RWDD2B	P57060	319 aa		13.52	□□□□□ -0.25
POLE-215	ENST00000540987	XRCC4	Q13426	336 aa		13.52	□□□□□ -0.25
POLE-215	ENST00000540987	SIRPB2	Q5JXA9	342 aa		13.52	□□□□□ -0.25
POLE-215	ENST00000540987	ZNF569	Q5MCW4	686 aa		13.52	□□□□□ -0.25
POLE-215	ENST00000540987	TMPRSS9	Q7Z410	1059 aa		13.52	□□□□□ -0.25
POLE-215	ENST00000540987	OR6C4	Q8NGE1	309 aa		13.52	□□□□□ -0.25
POLE-215	ENST00000540987	VAT1	Q99536	393 aa		13.52	□□□□□ -0.25
POLE-215	ENST00000540987	SPATA16	Q9BXB7	569 aa		13.52	□□□□□ -0.25
POLE-215	ENST00000540987	GPR63	Q9BZJ6	419 aa		13.52	□□□□□ -0.25
POLE-215	ENST00000540987	FOXP3	Q9BZS1	431 aa		13.52	□□□□□ -0.25
POLE-215	ENST00000540987	GBA3	Q9H227	469 aa		13.52	□□□□□ -0.25
POLE-215	ENST00000540987	LRIT1	Q9P2V4	623 aa		13.52	□□□□□ -0.25
POLE-215	ENST00000540987	RSPH14	Q9UHP6	348 aa		13.52	□□□□□ -0.25
POLE-215	ENST00000540987	TMPRSS11E	Q9UL52	423 aa		13.52	□□□□□ -0.25
POLE-215	ENST00000540987	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	13.52	□□□□□ -0.25
POLE-215	ENST00000540987	EFR3B	Q9Y2G0	817 aa		13.52	□□□□□ -0.25
POLE-215	ENST00000540987	ZNF106	Q9H2Y7	1883 aa	Known RBP	13.52	□□□□□ -0.25
POLE-215	ENST00000540987	PNLIP	P16233	465 aa		13.51	□□□□□ -0.25
POLE-215	ENST00000540987	ACTN2	P35609	894 aa		13.51	□□□□□ -0.25
POLE-215	ENST00000540987	B4GALNT1	Q00973	533 aa		13.51	□□□□□ -0.25
POLE-215	ENST00000540987	NR1D2	Q14995	579 aa		13.51	□□□□□ -0.25
POLE-215	ENST00000540987	KHDC1	Q4VXA5	237 aa	Known RBP	13.51	□□□□□ -0.25
POLE-215	ENST00000540987	CCDC181	Q5TID7	509 aa		13.51	□□□□□ -0.25
POLE-215	ENST00000540987	PID1	Q7Z2X4	250 aa		13.51	□□□□□ -0.25
POLE-215	ENST00000540987	CDKL3	Q8IVW4	592 aa	Predicted RBP	13.51	□□□□□ -0.25
POLE-215	ENST00000540987	ARL14	Q8N4G2	192 aa		13.51	□□□□□ -0.25
POLE-215	ENST00000540987	SLC25A41	Q8N5S1	370 aa		13.51	□□□□□ -0.25
POLE-215	ENST00000540987	TRAM1L1	Q8N609	369 aa		13.51	□□□□□ -0.25
POLE-215	ENST00000540987	IPMK	Q8NFU5	416 aa		13.51	□□□□□ -0.25
POLE-215	ENST00000540987	LIN37	Q96GY3	246 aa	Predicted RBP	13.51	□□□□□ -0.25
POLE-215	ENST00000540987	EPB41L5	Q9HCM4	733 aa		13.51	□□□□□ -0.25
POLE-215	ENST00000540987	ATXN10	Q9UBB4	475 aa		13.51	□□□□□ -0.25
POLE-215	ENST00000540987	ADGRG1	Q9Y653	693 aa		13.51	□□□□□ -0.25
POLE-215	ENST00000540987	PTPRQ	Q9UMZ3	2332 aa		13.5	□□□□□ -0.25
POLE-215	ENST00000540987	CCDC187	A0A096LP49	1063 aa		13.5	□□□□□ -0.25
POLE-215	ENST00000540987	B4GAT1	O43505	415 aa		13.5	□□□□□ -0.25
POLE-215	ENST00000540987	RBP3	P10745	1247 aa		13.5	□□□□□ -0.25
POLE-215	ENST00000540987	ACP5	P13686	325 aa		13.5	□□□□□ -0.25
POLE-215	ENST00000540987	ZNF8	P17098	575 aa	Predicted RBP	13.5	□□□□□ -0.25
POLE-215	ENST00000540987	PSMB4	P28070	264 aa		13.5	□□□□□ -0.25
POLE-215	ENST00000540987	OR1D5	P58170	312 aa		13.5	□□□□□ -0.25
POLE-215	ENST00000540987	EIF3E	P60228	445 aa	Known RBP	13.5	□□□□□ -0.25
POLE-215	ENST00000540987	MPP3	Q13368	585 aa		13.5	□□□□□ -0.25
POLE-215	ENST00000540987	OLIG2	Q13516	323 aa		13.5	□□□□□ -0.25
POLE-215	ENST00000540987	LRP8	Q14114	963 aa		13.5	□□□□□ -0.25
POLE-215	ENST00000540987	SLC1A5	Q15758	541 aa		13.5	□□□□□ -0.25
POLE-215	ENST00000540987	IGF2-AS	Q6U949	168 aa		13.5	□□□□□ -0.25
POLE-215	ENST00000540987	PEX26	Q7Z412	305 aa		13.5	□□□□□ -0.25
POLE-215	ENST00000540987	ADGRG6	Q86SQ4	1221 aa		13.5	□□□□□ -0.25
POLE-215	ENST00000540987	SLITRK4	Q8IW52	837 aa		13.5	□□□□□ -0.25
POLE-215	ENST00000540987	SLC37A2	Q8TED4	501 aa		13.5	□□□□□ -0.25
POLE-215	ENST00000540987	FGF11	Q92914	225 aa		13.5	□□□□□ -0.25
POLE-215	ENST00000540987	GLYATL1	Q969I3	302 aa		13.5	□□□□□ -0.25
POLE-215	ENST00000540987	GRAMD1A	Q96CP6	724 aa		13.5	□□□□□ -0.25

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