RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 MRGPRGQ86SM5 289 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 HAPLN4Q86UW8 402 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 DNAAF5Q86Y56 855 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 FOXRED2Q8IWF2 684 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 TBC1D3Q8IZP1 549 aaPredicted RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 ZNF713Q8N859 430 aaPredicted RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 B3GALNT2Q8NCR0 500 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 BEST2Q8NFU1 509 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 DUSP19Q8WTR2 217 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 FAR1Q8WVX9 515 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 KAT2BQ92831 832 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 HDAC11Q96DB2 347 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 VMP1Q96GC9 406 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 KCNK16Q96T55 309 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 YME1L1Q96TA2 773 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 DPCDQ9BVM2 203 aaPredicted RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 POLDIP3Q9BY77 421 aaKnown RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 IFIH1Q9BYX4 1025 aaKnown RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 PPIL3Q9H2H8 161 aaKnown RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 KLHL1Q9NR64 748 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 KLHL13Q9P2N7 655 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 MAN1B1Q9UKM7 699 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 KCNE2Q9Y6J6 123 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 PNPLA6Q8IY17 1366 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 EVPLQ92817 2033 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 A0A0U1RQF3 1178 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 A0A0U1RQS6 177 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 IQCMA0A1B0GVH7 501 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 PTGES3LE9PB15 166 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 NPIPB8E9PQR5 432 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 AP3D1O14617 1153 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 ADAM10O14672 748 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 TIMM23O14925 209 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 VILLO15195 856 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 TTLL1O95922 423 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 CYP19A1P11511 503 aaPredicted RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 EPCAMP16422 314 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 PRLRP16471 622 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 PON1P27169 355 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 TACR3P29371 465 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 TLX1P31314 330 aaPredicted RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 ASMTP46597 345 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 AMTP48728 403 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 PMS2P54278 862 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 TMF1P82094 1093 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 STK4Q13043 487 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 KLF10Q13118 480 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 ALCAMQ13740 583 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 TUBA3CQ13748 450 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 IDI1Q13907 227 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 TAF7Q15545 349 aaPredicted RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 INAQ16352 499 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 CDONQ4KMG0 1287 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 LCE1EQ5T753 118 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 TUBA3EQ6PEY2 450 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 CPLX2Q6PUV4 134 aaKnown RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 ATF7IPQ6VMQ6 1270 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 CFAP77Q6ZQR2 320 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 SDCCAG8Q86SQ7 713 aaPredicted RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 PIP4P1Q86T03 277 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 PDILTQ8N807 584 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 AGBL3Q8NEM8 1001 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 OR2AK2Q8NG84 335 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 PRCCQ92733 491 aaPredicted RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 ATOH1Q92858 354 aaPredicted RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 ALG14Q96F25 216 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 FBXL20Q96IG2 436 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 PIGQQ9BRB3 760 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 EFHD1Q9BUP0 239 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 CIPCQ9C0C6 399 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 PCED1AQ9H1Q7 454 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 KLK15Q9H2R5 256 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 R3HDMLQ9H3Y0 253 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 AAMDCQ9H7C9 122 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 RAB9BQ9NP90 201 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 SH3GLB2Q9NR46 395 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 TMEM30AQ9NV96 361 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 CWC25Q9NXE8 425 aaPredicted RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 P4HTMQ9NXG6 502 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 LRIT1Q9P2V4 623 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 SLC9A2Q9UBY0 812 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 TSPYL4Q9UJ04 414 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 PADI3Q9ULW8 664 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 SNX7Q9UNH6 387 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 COG5Q9UP83 839 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 ICKQ9UPZ9 632 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 PA2G4Q9UQ80 394 aaKnown RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 MAU2Q9Y6X3 613 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 FAM169AQ9Y6X4 670 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 ABCC9O60706 1549 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 GPRASP1Q5JY77 1395 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 CTAGE9A4FU28 777 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 HTR3EA5X5Y0 456 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 MYO1GB0I1T2 1018 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 MS4A18H0YCH9 400 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 PLPP2O43688 288 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 RAMP1O60894 148 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 TADA2AO75478 443 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 NEURL1O76050 574 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms