RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 VSIG1Q86XK7 387 aa20.74■□□□□ 0.91
SMPD1-204ENST00000530395 RCBTB1Q8NDN9 531 aa20.74■□□□□ 0.91
SMPD1-204ENST00000530395 OR4D9Q8NGE8 314 aa20.74■□□□□ 0.91
SMPD1-204ENST00000530395 SLC35G2Q8TBE7 412 aa20.74■□□□□ 0.91
SMPD1-204ENST00000530395 SGF29Q96ES7 293 aa20.74■□□□□ 0.91
SMPD1-204ENST00000530395 MAK16Q9BXY0 300 aaKnown RBP20.74■□□□□ 0.91
SMPD1-204ENST00000530395 FAM83DQ9H4H8 585 aa20.74■□□□□ 0.91
SMPD1-204ENST00000530395 STN1Q9H668 368 aaKnown RBP20.74■□□□□ 0.91
SMPD1-204ENST00000530395 RMI1Q9H9A7 625 aa20.74■□□□□ 0.91
SMPD1-204ENST00000530395 FOXJ2Q9P0K8 574 aa20.74■□□□□ 0.91
SMPD1-204ENST00000530395 IGHV1OR21-1A0A087WYE8 117 aa20.73■□□□□ 0.91
SMPD1-204ENST00000530395 C9orf172C9J069 976 aa20.73■□□□□ 0.91
SMPD1-204ENST00000530395 APOL1O14791 398 aa20.73■□□□□ 0.91
SMPD1-204ENST00000530395 MMP2P08253 660 aa20.73■□□□□ 0.91
SMPD1-204ENST00000530395 ZFXP17010 805 aaPredicted RBP20.73■□□□□ 0.91
SMPD1-204ENST00000530395 FASLGP48023 281 aa20.73■□□□□ 0.91
SMPD1-204ENST00000530395 AP1B1Q10567 949 aa20.73■□□□□ 0.91
SMPD1-204ENST00000530395 SQSTM1Q13501 440 aa20.73■□□□□ 0.91
SMPD1-204ENST00000530395 PDK1Q15118 436 aa20.73■□□□□ 0.91
SMPD1-204ENST00000530395 HENMT1Q5T8I9 393 aaKnown RBP20.73■□□□□ 0.91
SMPD1-204ENST00000530395 NKAIN2Q5VXU1 208 aa20.73■□□□□ 0.91
SMPD1-204ENST00000530395 ZNF574Q6ZN55 896 aaPredicted RBP20.73■□□□□ 0.91
SMPD1-204ENST00000530395 ZFAND4Q86XD8 727 aa20.73■□□□□ 0.91
SMPD1-204ENST00000530395 RHOT2Q8IXI1 618 aa20.73■□□□□ 0.91
SMPD1-204ENST00000530395 PLD5Q8N7P1 536 aa20.73■□□□□ 0.91
SMPD1-204ENST00000530395 ZSCAN1Q8NBB4 408 aa20.73■□□□□ 0.91
SMPD1-204ENST00000530395 SLC37A2Q8TED4 501 aa20.73■□□□□ 0.91
SMPD1-204ENST00000530395 MED8Q96G25 268 aa20.73■□□□□ 0.91
SMPD1-204ENST00000530395 AHCYL2Q96HN2 611 aaKnown RBP20.73■□□□□ 0.91
SMPD1-204ENST00000530395 SLC38A3Q99624 504 aa20.73■□□□□ 0.91
SMPD1-204ENST00000530395 TENM4Q6N022 2769 aa20.72■□□□□ 0.91
SMPD1-204ENST00000530395 PPP1R12AO14974 1030 aaPredicted RBP20.72■□□□□ 0.91
SMPD1-204ENST00000530395 EFSO43281 561 aa20.72■□□□□ 0.91
SMPD1-204ENST00000530395 DNAJC6O75061 913 aa20.72■□□□□ 0.91
SMPD1-204ENST00000530395 ATP1A1P05023 1023 aaKnown RBP20.72■□□□□ 0.91
SMPD1-204ENST00000530395 CSTF2P33240 577 aaKnown RBP eCLIP20.72■□□□□ 0.91
SMPD1-204ENST00000530395 ZBTB17Q13105 803 aa20.72■□□□□ 0.91
SMPD1-204ENST00000530395 SLC9A4Q6AI14 798 aa20.72■□□□□ 0.91
SMPD1-204ENST00000530395 CHST15Q7LFX5 561 aaPredicted RBP20.72■□□□□ 0.91
SMPD1-204ENST00000530395 SFRP1Q8N474 314 aa20.72■□□□□ 0.91
SMPD1-204ENST00000530395 AGBL5Q8NDL9 886 aa20.72■□□□□ 0.91
SMPD1-204ENST00000530395 OR10G6Q8NH81 332 aa20.72■□□□□ 0.91
SMPD1-204ENST00000530395 CCDC42Q96M95 316 aa20.72■□□□□ 0.91
SMPD1-204ENST00000530395 TAAR9Q96RI9 348 aa20.72■□□□□ 0.91
SMPD1-204ENST00000530395 ABHD10Q9NUJ1 306 aa20.72■□□□□ 0.91
SMPD1-204ENST00000530395 OAS3Q9Y6K5 1087 aaKnown RBP20.72■□□□□ 0.91
SMPD1-204ENST00000530395 BOD1L1Q8NFC6 3051 aa20.72■□□□□ 0.91
SMPD1-204ENST00000530395 SDK2Q58EX2 2172 aa20.71■□□□□ 0.91
SMPD1-204ENST00000530395 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.71■□□□□ 0.91
SMPD1-204ENST00000530395 STMND1H3BQB6 276 aa20.71■□□□□ 0.91
SMPD1-204ENST00000530395 DUX1O43812 170 aa20.71■□□□□ 0.91
SMPD1-204ENST00000530395 KRT1P04264 644 aa20.71■□□□□ 0.91
SMPD1-204ENST00000530395 THRAP10827 490 aa20.71■□□□□ 0.91
SMPD1-204ENST00000530395 CCL4P13236 92 aa20.71■□□□□ 0.91
SMPD1-204ENST00000530395 SLC2A4P14672 509 aa20.71■□□□□ 0.91
SMPD1-204ENST00000530395 CSF2RBP32927 897 aa20.71■□□□□ 0.91
SMPD1-204ENST00000530395 GALNT3Q14435 633 aa20.71■□□□□ 0.91
SMPD1-204ENST00000530395 SKOR2Q2VWA4 1001 aaPredicted RBP20.71■□□□□ 0.91
SMPD1-204ENST00000530395 DTX1Q86Y01 620 aa20.71■□□□□ 0.91
SMPD1-204ENST00000530395 CNTD1Q8N815 330 aa20.71■□□□□ 0.91
SMPD1-204ENST00000530395 WDR24Q96S15 920 aa20.71■□□□□ 0.91
SMPD1-204ENST00000530395 SEMA4CQ9C0C4 833 aa20.71■□□□□ 0.91
SMPD1-204ENST00000530395 ZFYVE1Q9HBF4 777 aa20.71■□□□□ 0.91
SMPD1-204ENST00000530395 RAD18Q9NS91 495 aa20.71■□□□□ 0.91
SMPD1-204ENST00000530395 CNOT6Q9ULM6 557 aaKnown RBP20.71■□□□□ 0.91
SMPD1-204ENST00000530395 PRKAB1Q9Y478 270 aa20.71■□□□□ 0.91
SMPD1-204ENST00000530395 TRBV23OR9-2A0A075B6M9 112 aa20.7■□□□□ 0.9
SMPD1-204ENST00000530395 FADS2P1A8MWK0 482 aa20.7■□□□□ 0.9
SMPD1-204ENST00000530395 MTA2O94776 668 aa20.7■□□□□ 0.9
SMPD1-204ENST00000530395 ATP1A2P50993 1020 aa20.7■□□□□ 0.9
SMPD1-204ENST00000530395 HHEXQ03014 270 aa20.7■□□□□ 0.9
SMPD1-204ENST00000530395 ZNF569Q5MCW4 686 aa20.7■□□□□ 0.9
SMPD1-204ENST00000530395 LRRC38Q5VT99 294 aa20.7■□□□□ 0.9
SMPD1-204ENST00000530395 TMEM71Q6P5X7 295 aa20.7■□□□□ 0.9
SMPD1-204ENST00000530395 LYSMD3Q7Z3D4 306 aa20.7■□□□□ 0.9
SMPD1-204ENST00000530395 NT5DC3Q86UY8 548 aa20.7■□□□□ 0.9
SMPD1-204ENST00000530395 VASH2Q86V25 355 aa20.7■□□□□ 0.9
SMPD1-204ENST00000530395 RFX6Q8HWS3 928 aa20.7■□□□□ 0.9
SMPD1-204ENST00000530395 VSTM4Q8IW00 320 aa20.7■□□□□ 0.9
SMPD1-204ENST00000530395 SH3KBP1Q96B97 665 aa20.7■□□□□ 0.9
SMPD1-204ENST00000530395 HERPUD2Q9BSE4 406 aa20.7■□□□□ 0.9
SMPD1-204ENST00000530395 CEP41Q9BYV8 373 aa20.7■□□□□ 0.9
SMPD1-204ENST00000530395 BRD8Q9H0E9 1235 aa20.7■□□□□ 0.9
SMPD1-204ENST00000530395 CARD9Q9H257 536 aa20.7■□□□□ 0.9
SMPD1-204ENST00000530395 NHEJ1Q9H9Q4 299 aaPredicted RBP20.7■□□□□ 0.9
SMPD1-204ENST00000530395 SPTLC3Q9NUV7 552 aa20.7■□□□□ 0.9
SMPD1-204ENST00000530395 PCDHGA3Q9Y5H0 932 aa20.7■□□□□ 0.9
SMPD1-204ENST00000530395 SETXQ7Z333 2677 aaKnown RBP20.69■□□□□ 0.9
SMPD1-204ENST00000530395 C3orf70A6NLC5 250 aaPredicted RBP20.69■□□□□ 0.9
SMPD1-204ENST00000530395 MFAP3LO75121 409 aa20.69■□□□□ 0.9
SMPD1-204ENST00000530395 ITGB2P05107 769 aa20.69■□□□□ 0.9
SMPD1-204ENST00000530395 FGF3P11487 239 aaPredicted RBP20.69■□□□□ 0.9
SMPD1-204ENST00000530395 ACP5P13686 325 aa20.69■□□□□ 0.9
SMPD1-204ENST00000530395 MPSTP25325 297 aa20.69■□□□□ 0.9
SMPD1-204ENST00000530395 SRSF6Q13247 344 aaKnown RBP20.69■□□□□ 0.9
SMPD1-204ENST00000530395 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.69■□□□□ 0.9
SMPD1-204ENST00000530395 XKR5Q6UX68 686 aa20.69■□□□□ 0.9
SMPD1-204ENST00000530395 ZNF761Q86XN6 746 aaPredicted RBP20.69■□□□□ 0.9
SMPD1-204ENST00000530395 PHYKPLQ8IUZ5 450 aa20.69■□□□□ 0.9
SMPD1-204ENST00000530395 RHOT1Q8IXI2 618 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms