RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 ZNF354CQ86Y25 554 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 ARHGAP24Q8N264 748 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 MREGQ8N565 214 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 Q8N9P0 234 aaPredicted RBP4.03□□□□□ -1.76
CTR9-205ENST00000529898 CCDC197Q8NCU1 140 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 GRPEL2Q8TAA5 225 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 BRIX1Q8TDN6 353 aaKnown RBP4.03□□□□□ -1.76
CTR9-205ENST00000529898 DDI1Q8WTU0 396 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 LRRC59Q96AG4 307 aaKnown RBP4.03□□□□□ -1.76
CTR9-205ENST00000529898 C19orf60Q96EN9 201 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 C1GALT1C1Q96EU7 318 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 EDC3Q96F86 508 aaKnown RBP4.03□□□□□ -1.76
CTR9-205ENST00000529898 MSANTD3Q96H12 275 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 ZNF560Q96MR9 790 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 TTC25Q96NG3 672 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 SLC46A1Q96NT5 459 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 TMEM237Q96Q45 408 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 PANX2Q96RD6 677 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 RANBP9Q96S59 729 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 YME1L1Q96TA2 773 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 SMAD5Q99717 465 aaKnown RBP4.03□□□□□ -1.76
CTR9-205ENST00000529898 NEURL2Q9BR09 285 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 MXD3Q9BW11 206 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 NYXQ9GZU5 481 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 LSG1Q9H089 658 aaKnown RBP4.03□□□□□ -1.76
CTR9-205ENST00000529898 DDX47Q9H0S4 455 aaKnown RBP4.03□□□□□ -1.76
CTR9-205ENST00000529898 SH2D4AQ9H788 454 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 TUFT1Q9NNX1 390 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 RASSF1Q9NS23 344 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 TBC1D23Q9NUY8 699 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 PANK4Q9NVE7 773 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 ETNK2Q9NVF9 386 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 DDX18Q9NVP1 670 aaKnown RBP4.03□□□□□ -1.76
CTR9-205ENST00000529898 HYPKQ9NX55 129 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 DNAJB4Q9UDY4 337 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 SH3BGRL2Q9UJC5 107 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 B3GNT3Q9Y2A9 372 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 ANKRD6Q9Y2G4 727 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 AP3M1Q9Y2T2 418 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 ZNF175Q9Y473 711 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 ATP7BP35670 1465 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 USP54Q70EL1 1684 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 SSH2Q76I76 1423 aa4.03□□□□□ -1.76
CTR9-205ENST00000529898 RGPD8O14715 1765 aaPredicted RBP4.02□□□□□ -1.77
CTR9-205ENST00000529898 AFF2P51816 1311 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 TTC21AQ8NDW8 1320 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 CPS1P31327 1500 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 HEATR9A2RTY3 570 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 CTAGE9A4FU28 777 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 ARHGEF35A5YM69 484 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 VWA3AA6NCI4 1184 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 SMCO2A6NFE2 343 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 ZSCAN5BA6NJL1 495 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 H0YIZ8 118 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 UBXN8O00124 270 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 ADAMTS3O15072 1205 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 ACOX3O15254 700 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 PI15O43692 258 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 PLOD3O60568 738 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 PSIP1O75475 530 aaKnown RBP4.02□□□□□ -1.77
CTR9-205ENST00000529898 ALDH1L1O75891 902 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 CCNDBP1O95273 360 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 TGDSO95455 350 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 AGR2O95994 175 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 IFNA16P05015 189 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 THP07101 528 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 EBLN1P0CF75 366 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 KRT5P13647 590 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 NDUFB7P17568 137 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 ITGB6P18564 788 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 NR1D1P20393 614 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 CDH3P22223 829 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 SHMT1P34896 483 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 RFC4P35249 363 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 HOXD13P35453 343 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 LIPAP38571 399 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 PTPN9P43378 593 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 ME1P48163 572 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 PIP4K2AP48426 406 aaPredicted RBP4.02□□□□□ -1.77
CTR9-205ENST00000529898 STARP49675 285 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 EIF2B2P49770 351 aaKnown RBP4.02□□□□□ -1.77
CTR9-205ENST00000529898 SULT1E1P49888 294 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 RASSF2P50749 326 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 RAP1GDS1P52306 607 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 AP1S2P56377 157 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 SOX8P57073 446 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 STX1BP61266 288 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 GNG11P61952 73 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 PSMC5P62195 406 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 CCNA1P78396 465 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 COG7P83436 770 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 XIAPP98170 497 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 TFAP4Q01664 338 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 OTUD4Q01804 1114 aaKnown RBP4.02□□□□□ -1.77
CTR9-205ENST00000529898 GUCY2DQ02846 1103 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 RNASELQ05823 741 aaKnown RBP4.02□□□□□ -1.77
CTR9-205ENST00000529898 SPAG1Q07617 926 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 CSTF3Q12996 717 aaKnown RBP4.02□□□□□ -1.77
CTR9-205ENST00000529898 GRM1Q13255 1194 aa4.02□□□□□ -1.77
CTR9-205ENST00000529898 TRPC3Q13507 836 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms