RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 SPINT3P49223 89 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 LMAN1P49257 510 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 GEMP55040 296 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 INHBCP55103 352 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 WNT3AP56704 352 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 PCBP4P57723 403 aaKnown RBP9.02□□□□□ -0.97
CMTM1-210ENST00000528441 GSDMDP57764 484 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 COPS2P61201 443 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 CCL7P80098 99 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 CTBSQ01459 385 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 OTUD4Q01804 1114 aaKnown RBP9.02□□□□□ -0.97
CMTM1-210ENST00000528441 DPTQ07507 201 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 PRKD1Q15139 912 aaPredicted RBP9.02□□□□□ -0.97
CMTM1-210ENST00000528441 TCEAL1Q15170 157 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 ISXQ2M1V0 245 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 COL28A1Q2UY09 1125 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 KCTD16Q68DU8 428 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 ALG1LQ6GMV1 187 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 CRTC3Q6UUV7 619 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 ADAMTSL4Q6UY14 1074 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 ZNF765Q7L2R6 523 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 TECPR1Q7Z6L1 1165 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 TRIM48Q8IWZ4 208 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 ARL14Q8N4G2 192 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 CNTD1Q8N815 330 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 DCBLD1Q8N8Z6 715 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 ANKK1Q8NFD2 765 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 TEKT5Q96M29 485 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 TMEM74Q96NL1 305 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 QKIQ96PU8 341 aaKnown RBP eCLIP9.02□□□□□ -0.97
CMTM1-210ENST00000528441 AGAP2Q99490 1192 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 VAT1Q99536 393 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 SLC38A3Q99624 504 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 FICDQ9BVA6 458 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 FRMD8Q9BZ67 464 aaPredicted RBP9.02□□□□□ -0.97
CMTM1-210ENST00000528441 FOXP3Q9BZS1 431 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 TSGA10Q9BZW7 698 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 LRRN3Q9H3W5 708 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 C10orf88Q9H8K7 445 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 TRNAU1APQ9NX07 287 aaKnown RBP9.02□□□□□ -0.97
CMTM1-210ENST00000528441 ATXN7L1Q9ULK2 861 aaPredicted RBP9.02□□□□□ -0.97
CMTM1-210ENST00000528441 GUCA1BQ9UMX6 200 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 PACSIN2Q9UNF0 486 aaPredicted RBP9.02□□□□□ -0.97
CMTM1-210ENST00000528441 KCNK6Q9Y257 313 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 PPIL1Q9Y3C6 166 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 PKP3Q9Y446 797 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 PRKAB1Q9Y478 270 aa9.02□□□□□ -0.97
CMTM1-210ENST00000528441 CCDC187A0A096LP49 1063 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 LY6G6EA0A0G2JKS1 128 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 RGSL1A5PLK6 1076 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 GOLGA6L3A6NEY3 463 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 PDZK1P1A8MUH7 402 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 PJA2O43164 708 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 KRT86O43790 486 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 ANXA9O76027 345 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 ECEL1O95672 775 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 MMP2P08253 660 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 RBP3P10745 1247 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 SLC2A4P14672 509 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 TEAD1P28347 426 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 CDC25BP30305 580 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 AKT1P31749 480 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 MAPK10P53779 464 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 MPP3Q13368 585 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 SEPT7Q16181 437 aaKnown RBP9.01□□□□□ -0.97
CMTM1-210ENST00000528441 ARHGEF18Q6ZSZ5 1173 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 BBS12Q6ZW61 710 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 TRAPPC5Q8IUR0 188 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 ZNF567Q8N184 647 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 FBXO39Q8N4B4 442 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 ZNF248Q8NDW4 579 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 WDR36Q8NI36 951 aaKnown RBP9.01□□□□□ -0.97
CMTM1-210ENST00000528441 ACTL9Q8TC94 416 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 KCNE4Q8WWG9 221 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 FGF11Q92914 225 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 ALS2CR12Q96Q35 445 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 ZSCAN5AQ9BUG6 496 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 OR2AG1Q9H205 316 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 POLR1BQ9H9Y6 1135 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 KCNK4Q9NYG8 393 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 TRIM10Q9UDY6 481 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 PISDQ9UG56 409 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 RALYQ9UKM9 306 aaKnown RBP9.01□□□□□ -0.97
CMTM1-210ENST00000528441 TRHDEQ9UKU6 1024 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 DNAJC16Q9Y2G8 782 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 PLEKHM1Q9Y4G2 1056 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 PCDHA3Q9Y5H8 950 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 RNF215Q9Y6U7 377 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 DUSP10Q9Y6W6 482 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 U3KQA8 63 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 CHD8Q9HCK8 2581 aa9.01□□□□□ -0.97
CMTM1-210ENST00000528441 GRID2IPA4D2P6 1211 aa9□□□□□ -0.97
CMTM1-210ENST00000528441 RCCD1A6NED2 376 aa9□□□□□ -0.97
CMTM1-210ENST00000528441 MIF4GDA9UHW6 222 aaKnown RBP9□□□□□ -0.97
CMTM1-210ENST00000528441 D6RAR5 112 aa9□□□□□ -0.97
CMTM1-210ENST00000528441 C3orf80F5H4A9 247 aa9□□□□□ -0.97
CMTM1-210ENST00000528441 SMAPO00193 183 aa9□□□□□ -0.97
CMTM1-210ENST00000528441 TAF4O00268 1085 aa9□□□□□ -0.97
CMTM1-210ENST00000528441 STX7O15400 261 aaKnown RBP9□□□□□ -0.97
CMTM1-210ENST00000528441 GRID2O43424 1007 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms